Guide to the Human Genome
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Name: ARHGAP12 Sequence: fasta or formatted (846aa) NCBI GI: 26986534
Description:

Rho GTPase activating protein 12

Referenced in:

Rho and Rac

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.8         32           2
 C cysteine            0.7          6           1
 D aspartate           5.8         49           2
 E glutamate           7.8         66           3
 F phenylalanine       3.4         29           2
 G glycine             5.6         47           1
 H histidine           2.1         18           1
 I isoleucine          5.2         44           2
 K lysine              8.5         72           2
 L leucine             7.4         63           2
 M methionine          0.9          8           1
 N asparagine          5.8         49           2
 P proline             5.4         46           2
 Q glutamine           6.3         53           3
 R arginine            5.1         43           2
 S serine             10.5         89           4
 T threonine           5.6         47           2
 V valine              5.3         45           1
 W tryptophan          1.7         14           2
 Y tyrosine            3.1         26           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Rho GTPase activating protein 12 
ARHGAP27              0.235   Rho GTPase activating protein 27 isoform a 
ARHGAP27              0.214   Rho GTPase activating protein 27 isoform b 
ARHGAP15              0.211   ARHGAP15 
ARHGAP9               0.174   Rho GTPase activating protein 9 isoform 1 
ARHGAP9               0.174   Rho GTPase activating protein 9 isoform 3 
ARHGAP9               0.127   Rho GTPase activating protein 9 isoform 2 
ARHGAP21              0.085   Rho GTPase activating protein 21 
ARHGAP23              0.073   Rho GTPase activating protein 23 
CHN2                  0.061   beta chimerin isoform 2 
CHN2                  0.061   beta chimerin isoform 1 
CHN1                  0.060   chimerin (chimaerin) 1 isoform a 
CHN1                  0.060   chimerin (chimaerin) 1 isoform b 
SNX26                 0.060   sorting nexin 26 
ARHGAP30              0.059   Rho GTPase activating protein 30 isoform 2 
ARHGAP30              0.059   Rho GTPase activating protein 30 isoform 1 
RICS                  0.057   Rho GTPase-activating protein isoform 1 
GRLF1                 0.057   glucocorticoid receptor DNA binding factor 1 
ABR                   0.056   active breakpoint cluster region-related  protein i...
ABR                   0.056   active breakpoint cluster region-related  protein is...
ABR                   0.056   active breakpoint cluster region-related  protein is...
BCR                   0.056   breakpoint cluster region isoform 1 
BCR                   0.056   breakpoint cluster region isoform 2 
RICS                  0.055   Rho GTPase-activating protein isoform 2 
ARHGAP10              0.054   Rho GTPase activating protein 10 
FLJ32810              0.053   Rho-type GTPase-activating protein FLJ32810 
OPHN1                 0.052   oligophrenin 1 
ARHGAP5               0.052   Rho GTPase activating protein 5 isoform a 
CDGAP                 0.050   Cdc42 GTPase-activating protein 
ARHGAP5               0.049   Rho GTPase activating protein 5 isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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