Guide to the Human Genome
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Name: ARHGAP18 Sequence: fasta or formatted (663aa) NCBI GI: 39932589
Description:

Rho GTPase activating protein 18

Referenced in:

Rho and Rac

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9         46           3
 C cysteine            0.8          5           1
 D aspartate           5.3         35           3
 E glutamate           9.4         62           3
 F phenylalanine       2.7         18           1
 G glycine             4.7         31           2
 H histidine           1.2          8           1
 I isoleucine          4.8         32           1
 K lysine              9.7         64           2
 L leucine            11.3         75           2
 M methionine          2.6         17           1
 N asparagine          4.2         28           1
 P proline             4.2         28           2
 Q glutamine           6.9         46           2
 R arginine            4.2         28           2
 S serine              6.6         44           3
 T threonine           5.4         36           2
 V valine              5.9         39           4
 W tryptophan          0.9          6           1
 Y tyrosine            2.3         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Rho GTPase activating protein 18 
C20orf95              0.306   PREDICTED: chromosome 20 open reading frame 95 [Hom...
C20orf95              0.306   PREDICTED: chromosome 20 open reading frame 95 [Hom...
C20orf95              0.306   PREDICTED: Rho GTPase-activating protein 18-like [H...
ARHGAP28              0.283   Rho GTPase activating protein 28 isoform a 
ARHGAP28              0.241   Rho GTPase activating protein 28 isoform b 
STARD13               0.061   StAR-related lipid transfer (START) domain containin...
STARD13               0.061   StAR-related lipid transfer (START) domain containin...
STARD13               0.061   StAR-related lipid transfer (START) domain containin...
DLC1                  0.058   deleted in liver cancer 1 isoform 1 
DLC1                  0.058   deleted in liver cancer 1 isoform 2 
ARHGAP27              0.052   Rho GTPase activating protein 27 isoform b 
ARHGAP27              0.052   Rho GTPase activating protein 27 isoform a 
ARHGAP19              0.051   Rho GTPase activating protein 19 
ARHGAP22              0.049   Rho GTPase activating protein 2 
RICH2                 0.049   Rho GTPase-activating protein RICH2 
ARHGAP6               0.049   Rho GTPase activating protein 6 isoform 4 
ARHGAP6               0.049   Rho GTPase activating protein 6 isoform 3 
ARHGAP6               0.049   Rho GTPase activating protein 6 isoform 1 
MYO9B                 0.048   myosin IXB isoform 2 
MYO9B                 0.048   myosin IXB isoform 1 
ARHGAP12              0.047   Rho GTPase activating protein 12 
ARHGAP23              0.046   Rho GTPase activating protein 23 
RALBP1                0.046   ralA binding protein 1 
ARHGAP9               0.045   Rho GTPase activating protein 9 isoform 1 
ARHGAP9               0.045   Rho GTPase activating protein 9 isoform 3 
ABR                   0.044   active breakpoint cluster region-related  protein i...
ARHGAP24              0.044   Rho GTPase activating protein 24 isoform 3 
ARHGAP24              0.044   Rho GTPase activating protein 24 isoform 2 
ARHGAP24              0.044   Rho GTPase activating protein 24 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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