Guide to the Human Genome
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Name: CCNB3 Sequence: fasta or formatted (291aa) NCBI GI: 16306525
Description:

cyclin B3 isoform 1

Referenced in:

Cyclins and Related Functions
Spindle, M phase, and Meiosis

Other entries for this name:
alt prot [1395aa] cyclin B3 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         19           3
 C cysteine            2.7          8           1
 D aspartate           4.1         12           2
 E glutamate           6.5         19           2
 F phenylalanine       3.4         10           2
 G glycine             2.1          6           1
 H histidine           3.4         10           2
 I isoleucine          4.8         14           1
 K lysine              8.6         25           2
 L leucine            14.1         41           3
 M methionine          3.1          9           1
 N asparagine          3.4         10           1
 P proline             5.2         15           2
 Q glutamine           3.8         11           1
 R arginine            2.7          8           2
 S serine              9.6         28           2
 T threonine           3.8         11           1
 V valine              5.8         17           1
 W tryptophan          0.3          1           1
 Y tyrosine            5.8         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cyclin B3 isoform 1 
CCNB3                 0.760   cyclin B3 isoform 3 
CCNB1                 0.181   cyclin B1 
CCNB2                 0.179   cyclin B2 
CCNA1                 0.168   cyclin A1 isoform c 
CCNA1                 0.168   cyclin A1 isoform c 
CCNA1                 0.168   cyclin A1 isoform b 
CCNA1                 0.168   cyclin A1 isoform a 
CCNA2                 0.138   cyclin A 
CCNF                  0.082   cyclin F 
CCNO                  0.063   cyclin domain containing 
CNTD2                 0.063   cyclin N-terminal domain containing 2 isoform 2 [Ho...
CCNE2                 0.055   cyclin E2 
CCNE1                 0.052   cyclin E1 isoform 1 
CCNE1                 0.052   cyclin E1 isoform 2 
CCNJ                  0.048   cyclin J isoform 1 
CCND1                 0.045   cyclin D1 
CCNG1                 0.045   cyclin G1 
CCNG1                 0.045   cyclin G1 
CCND3                 0.034   cyclin D3 isoform 2 
CCND2                 0.034   cyclin D2 
CCNJ                  0.032   cyclin J isoform 2 
CCNJ                  0.032   cyclin J isoform 3 
CCNI2                 0.029   cyclin I family, member 2 
CCND3                 0.027   cyclin D3 isoform 1 
CCNI                  0.027   cyclin I 
CCNJL                 0.023   cyclin J-like 
BRD4                  0.014   bromodomain-containing protein 4 isoform long 
ZFP112                0.009   zinc finger protein 228 isoform 1 
ZFP112                0.009   zinc finger protein 228 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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