Guide to the Human Genome
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Name: CNTD2 Sequence: fasta or formatted (307aa) NCBI GI: 242247025
Description:

cyclin N-terminal domain containing 2 isoform 2

Referenced in:

Cyclins and Related Functions

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.1         37           4
 C cysteine            2.3          7           1
 D aspartate           3.9         12           1
 E glutamate           5.9         18           2
 F phenylalanine       2.9          9           1
 G glycine             8.1         25           3
 H histidine           2.3          7           2
 I isoleucine          1.0          3           1
 K lysine              0.3          1           1
 L leucine            18.6         57           2
 M methionine          2.0          6           1
 N asparagine          0.3          1           1
 P proline             7.2         22           2
 Q glutamine           2.3          7           1
 R arginine           11.1         34           2
 S serine              8.5         26           2
 T threonine           1.3          4           1
 V valine              6.2         19           2
 W tryptophan          1.6          5           1
 Y tyrosine            2.3          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cyclin N-terminal domain containing 2 isoform 2 [Ho... 
CCNB1                 0.129   cyclin B1 
CCNB2                 0.119   cyclin B2 
CCNA1                 0.112   cyclin A1 isoform c 
CCNA1                 0.112   cyclin A1 isoform c 
CCNA1                 0.112   cyclin A1 isoform b 
CCNA1                 0.112   cyclin A1 isoform a 
CCNO                  0.106   cyclin domain containing 
CCNA2                 0.097   cyclin A 
CCNB3                 0.095   cyclin B3 isoform 3 
CCNF                  0.078   cyclin F 
CCND1                 0.073   cyclin D1 
CCNE1                 0.063   cyclin E1 isoform 1 
CCNE1                 0.063   cyclin E1 isoform 2 
CCNI                  0.063   cyclin I 
CCNE2                 0.061   cyclin E2 
CCNB3                 0.060   cyclin B3 isoform 1 
CCND2                 0.053   cyclin D2 
CCND3                 0.049   cyclin D3 isoform 2 
CCNG1                 0.041   cyclin G1 
CCNG1                 0.041   cyclin G1 
CCNG2                 0.031   cyclin G2 
CCNI2                 0.026   cyclin I family, member 2 
CCNJ                  0.024   cyclin J isoform 1 
CCND3                 0.020   cyclin D3 isoform 1 
CCNJ                  0.019   cyclin J isoform 3 
CCNJ                  0.019   cyclin J isoform 2 
CCNK                  0.017   cyclin K isoform 1 
CCNK                  0.017   cyclin K isoform 2 
CCNL1                 0.014   cyclin L1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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