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Search of human proteins with 5729982
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|5729982 DNA-directed DNA polymerase eta [Homo sapiens]
(713 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|5729982 DNA-directed DNA polymerase eta [Homo sapiens] 1422 0.0
gi|154350220 DNA polymerase iota [Homo sapiens] 144 2e-34
gi|7705344 DNA-directed DNA polymerase kappa [Homo sapiens] 107 3e-23
gi|84043967 REV1-like isoform 2 [Homo sapiens] 69 1e-11
gi|7706681 REV1-like isoform 1 [Homo sapiens] 69 1e-11
gi|239758058 PREDICTED: similar to mucin, partial [Homo sapiens] 43 9e-04
gi|239752529 PREDICTED: similar to mucin [Homo sapiens] 42 0.003
gi|91982772 mucin 17 [Homo sapiens] 42 0.003
gi|239743232 PREDICTED: hypothetical protein XP_002342775 [Homo ... 41 0.004
gi|150378545 POM121 membrane glycoprotein (rat)-like [Homo sapiens] 40 0.008
gi|46519147 ankyrin repeat and KH domain containing 1 isoform 1 ... 40 0.010
gi|37620163 ANKHD1-EIF4EBP3 protein [Homo sapiens] 40 0.010
gi|26051278 nuclear pore membrane protein 121 [Homo sapiens] 39 0.013
gi|115298682 HBxAg transactivated protein 2 [Homo sapiens] 39 0.013
gi|161019170 mucin 5AC [Homo sapiens] 39 0.017
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 39 0.017
gi|169214154 PREDICTED: hypothetical protein [Homo sapiens] 39 0.017
gi|169213511 PREDICTED: hypothetical protein [Homo sapiens] 39 0.017
gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens] 39 0.017
gi|161016767 mucin 21 [Homo sapiens] 39 0.017
gi|197276600 microtubule-associated protein 4 isoform 4 [Homo sa... 39 0.022
gi|47519639 microtubule-associated protein 4 isoform 1 [Homo sap... 39 0.022
gi|110431354 transducer of regulated CREB protein 3 isoform a [H... 39 0.022
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 39 0.022
gi|110431352 transducer of regulated CREB protein 3 isoform b [H... 38 0.029
gi|169211436 PREDICTED: hypothetical protein [Homo sapiens] 38 0.037
gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo sa... 38 0.037
gi|32698936 B-cell CLL/lymphoma 9-like [Homo sapiens] 38 0.037
gi|72256200 B-cell CLL/lymphoma 9 [Homo sapiens] 37 0.049
gi|239758038 PREDICTED: mucin 3A, cell surface associated, parti... 37 0.064
>gi|5729982 DNA-directed DNA polymerase eta [Homo sapiens]
Length = 713
Score = 1422 bits (3681), Expect = 0.0
Identities = 713/713 (100%), Positives = 713/713 (100%)
Query: 1 MATGQDRVVALVDMDCFFVQVEQRQNPHLRNKPCAVVQYKSWKGGGIIAVSYEARAFGVT 60
MATGQDRVVALVDMDCFFVQVEQRQNPHLRNKPCAVVQYKSWKGGGIIAVSYEARAFGVT
Sbjct: 1 MATGQDRVVALVDMDCFFVQVEQRQNPHLRNKPCAVVQYKSWKGGGIIAVSYEARAFGVT 60
Query: 61 RSMWADDAKKLCPDLLLAQVRESRGKANLTKYREASVEVMEIMSRFAVIERASIDEAYVD 120
RSMWADDAKKLCPDLLLAQVRESRGKANLTKYREASVEVMEIMSRFAVIERASIDEAYVD
Sbjct: 61 RSMWADDAKKLCPDLLLAQVRESRGKANLTKYREASVEVMEIMSRFAVIERASIDEAYVD 120
Query: 121 LTSAVQERLQKLQGQPISADLLPSTYIEGLPQGPTTAEETVQKEGMRKQGLFQWLDSLQI 180
LTSAVQERLQKLQGQPISADLLPSTYIEGLPQGPTTAEETVQKEGMRKQGLFQWLDSLQI
Sbjct: 121 LTSAVQERLQKLQGQPISADLLPSTYIEGLPQGPTTAEETVQKEGMRKQGLFQWLDSLQI 180
Query: 181 DNLTSPDLQLTVGAVIVEEMRAAIERETGFQCSAGISHNKVLAKLACGLNKPNRQTLVSH 240
DNLTSPDLQLTVGAVIVEEMRAAIERETGFQCSAGISHNKVLAKLACGLNKPNRQTLVSH
Sbjct: 181 DNLTSPDLQLTVGAVIVEEMRAAIERETGFQCSAGISHNKVLAKLACGLNKPNRQTLVSH 240
Query: 241 GSVPQLFSQMPIRKIRSLGGKLGASVIEILGIEYMGELTQFTESQLQSHFGEKNGSWLYA 300
GSVPQLFSQMPIRKIRSLGGKLGASVIEILGIEYMGELTQFTESQLQSHFGEKNGSWLYA
Sbjct: 241 GSVPQLFSQMPIRKIRSLGGKLGASVIEILGIEYMGELTQFTESQLQSHFGEKNGSWLYA 300
Query: 301 MCRGIEHDPVKPRQLPKTIGCSKNFPGKTALATREQVQWWLLQLAQELEERLTKDRNDND 360
MCRGIEHDPVKPRQLPKTIGCSKNFPGKTALATREQVQWWLLQLAQELEERLTKDRNDND
Sbjct: 301 MCRGIEHDPVKPRQLPKTIGCSKNFPGKTALATREQVQWWLLQLAQELEERLTKDRNDND 360
Query: 361 RVATQLVVSIRVQGDKRLSSLRRCCALTRYDAHKMSHDAFTVIKNCNTSGIQTEWSPPLT 420
RVATQLVVSIRVQGDKRLSSLRRCCALTRYDAHKMSHDAFTVIKNCNTSGIQTEWSPPLT
Sbjct: 361 RVATQLVVSIRVQGDKRLSSLRRCCALTRYDAHKMSHDAFTVIKNCNTSGIQTEWSPPLT 420
Query: 421 MLFLCATKFSASAPSSSTDITSFLSSDPSSLPKVPVTSSEAKTQGSGPAVTATKKATTSL 480
MLFLCATKFSASAPSSSTDITSFLSSDPSSLPKVPVTSSEAKTQGSGPAVTATKKATTSL
Sbjct: 421 MLFLCATKFSASAPSSSTDITSFLSSDPSSLPKVPVTSSEAKTQGSGPAVTATKKATTSL 480
Query: 481 ESFFQKAAERQKVKEASLSSLTAPTQAPMSNSPSKPSLPFQTSQSTGTEPFFKQKSLLLK 540
ESFFQKAAERQKVKEASLSSLTAPTQAPMSNSPSKPSLPFQTSQSTGTEPFFKQKSLLLK
Sbjct: 481 ESFFQKAAERQKVKEASLSSLTAPTQAPMSNSPSKPSLPFQTSQSTGTEPFFKQKSLLLK 540
Query: 541 QKQLNNSSVSSPQQNPWSNCKALPNSLPTEYPGCVPVCEGVSKLEESSKATPAEMDLAHN 600
QKQLNNSSVSSPQQNPWSNCKALPNSLPTEYPGCVPVCEGVSKLEESSKATPAEMDLAHN
Sbjct: 541 QKQLNNSSVSSPQQNPWSNCKALPNSLPTEYPGCVPVCEGVSKLEESSKATPAEMDLAHN 600
Query: 601 SQSMHASSASKSVLEVTQKATPNPSLLAAEDQVPCEKCGSLVPVWDMPEHMDYHFALELQ 660
SQSMHASSASKSVLEVTQKATPNPSLLAAEDQVPCEKCGSLVPVWDMPEHMDYHFALELQ
Sbjct: 601 SQSMHASSASKSVLEVTQKATPNPSLLAAEDQVPCEKCGSLVPVWDMPEHMDYHFALELQ 660
Query: 661 KSFLQPHSSNPQVVSAVSHQGKRNPKSPLACTNKRPRPEGMQTLESFFKPLTH 713
KSFLQPHSSNPQVVSAVSHQGKRNPKSPLACTNKRPRPEGMQTLESFFKPLTH
Sbjct: 661 KSFLQPHSSNPQVVSAVSHQGKRNPKSPLACTNKRPRPEGMQTLESFFKPLTH 713
>gi|154350220 DNA polymerase iota [Homo sapiens]
Length = 740
Score = 144 bits (364), Expect = 2e-34
Identities = 129/465 (27%), Positives = 207/465 (44%), Gaps = 61/465 (13%)
Query: 7 RVVALVDMDCFFVQVEQRQNPHLRNKPCAVVQYKSWKGGGIIAVSYEARAFGVTRSMWAD 66
RV+ VD+DCF+ QVE NP L++KP V Q ++ +YEAR GV + M
Sbjct: 53 RVIVHVDLDCFYAQVEMISNPELKDKPLGVQQKYL-----VVTCNYEARKLGVKKLMNVR 107
Query: 67 DAKKLCPDLLLAQVRESRGKANLTKYREASVEVMEIMSRFA-VIERASIDEAYVDLTSAV 125
DAK+ CP L+L + LT+YRE S +V E++ F+ V+ER DE +VDLT V
Sbjct: 108 DAKEKCPQLVLVNGED------LTRYREMSYKVTELLEEFSPVVERLGFDENFVDLTEMV 161
Query: 126 QERLQKLQGQPISADLLPSTYIEGLPQGPTTAEETVQKEGMRKQGLFQWLDSLQIDNLTS 185
++RLQ+LQ +SA TV Q + LD L I
Sbjct: 162 EKRLQQLQSDELSA-------------------VTVSGHVYNNQSI-NLLDVLHI----- 196
Query: 186 PDLQLTVGAVIVEEMRAAIERETGFQCSAGISHNKVLAKLACGLNKPNRQTLVSHGSVPQ 245
+L VG+ I EMR A+ + G AG++ NK+LAKL G+ KPN+QT++ S
Sbjct: 197 ---RLLVGSQIAAEMREAMYNQLGLTGCAGVASNKLLAKLVSGVFKPNQQTVLLPESCQH 253
Query: 246 LFSQM-PIRKIRSLGGKLGASVIEILGIEYMGELTQFTESQLQSHFGEKNGSWLYAMCRG 304
L + I++I +G K A +E LGI + +L F+ L+ G + + G
Sbjct: 254 LIHSLNHIKEIPGIGYKT-AKCLEALGINSVRDLQTFSPKILEKELGISVAQRIQKLSFG 312
Query: 305 IEHDPVKPRQLPKTIGCSKNFPGKTALATREQVQWWLLQLAQELEERLTKDRNDNDRVAT 364
++ PV P++ +F ++ + ++ + L L + D + T
Sbjct: 313 EDNSPVILSGPPQSFSEEDSFKKCSSEVEAKN------KIEELLASLLNRVCQDGRKPHT 366
Query: 365 QLVVSIRVQGDKRLSSLRRCCALTRYDAHKM---SHDAFT----VIKNCNTSGIQTEWSP 417
++ R +K R C + + K+ ++D T ++ + + +
Sbjct: 367 VRLIIRRYSSEKHYGRESRQCPIPSHVIQKLGTGNYDVMTPMVDILMKLFRNMVNVKMPF 426
Query: 418 PLTMLFLCATKFSASAPSSSTDITSFLSSDPSSLPKVPVTSSEAK 462
LT+L +C A + I +L +P + TS K
Sbjct: 427 HLTLLSVCFCNLKALNTAKKGLIDYYL------MPSLSTTSRSGK 465
>gi|7705344 DNA-directed DNA polymerase kappa [Homo sapiens]
Length = 870
Score = 107 bits (268), Expect = 3e-23
Identities = 169/652 (25%), Positives = 262/652 (40%), Gaps = 104/652 (15%)
Query: 12 VDMDCFFVQVEQRQNPHLRNKPCAVVQYKSWKGGGIIAVSYEARAFGVTRSMWADDAKKL 71
+DMD F+ VE R NP L++KP AV + +Y AR FGV +M AK+L
Sbjct: 106 IDMDAFYAAVEMRDNPELKDKPIAVGSMSM-----LSTSNYHARRFGVRAAMPGFIAKRL 160
Query: 72 CPDLLLAQVRESRGKANLTKYREASVEVMEIMSRFAVIERA-SIDEAYVDLTSAVQERLQ 130
CP L++ N KYR S EV EI++ + A S+DEAY+++T ++ER
Sbjct: 161 CPQLIIVP-------PNFDKYRAVSKEVKEILADYDPNFMAMSLDEAYLNITKHLEERQN 213
Query: 131 KLQ---------GQPISADLLPSTYIEGLPQ-----GPTTAEET---VQKEGMRKQGLFQ 173
+ G + D P + L + P EE+ VQ G Q F+
Sbjct: 214 WPEDKRRYFIKMGSSVENDN-PGKEVNKLSEHERSISPLLFEESPSDVQPPGDPFQVNFE 272
Query: 174 WLDSLQIDNLTSPDLQLTVGAVIVEEMRAAIERETGFQCSAGISHNKVLAKLACGLNKPN 233
++ QI L + + T +V+E+R IE++T SAGI+ N +LAK+ NKPN
Sbjct: 273 EQNNPQI--LQNSVVFGTSAQEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPN 330
Query: 234 --RQTLVSHGSVPQLFSQMPIRKIRSLGGKLGASVIEILGIEYMGELTQFTESQLQSHFG 291
Q L + +V +PIRK+ + GK+ +++ LGI EL Q + L F
Sbjct: 331 GQYQILPNRQAVMDFIKDLPIRKVSGI-GKVTEKMLKALGIITCTELYQ-QRALLSLLFS 388
Query: 292 EKNGSWLYAMCRGIEHDPVKPRQLPKTIGCSKNFPGKTALATREQVQWWLLQ-LAQELEE 350
E + + + G+ + K++ + F + + + Q+ L Q L EL +
Sbjct: 389 ETSWHYFLHISLGLGSTHLTRDGERKSMSVERTF----SEINKAEEQYSLCQELCSELAQ 444
Query: 351 RLTKDRNDNDRVATQLVVSIRVQGDKRLSSLRRCCALTRYDAHKMSHDAFTVIKNCNTSG 410
L K+R V +L K ++ + A T + + F + K +
Sbjct: 445 DLQKERLKGRTVTIKL---------KNVNFEVKTRASTVSSVVSTAEEIFAIAKELLKTE 495
Query: 411 IQTEWSPPLTMLFLCATKFSA-----SAPSSSTDITSFLSSDPSSLPKVPVTSSEA-KTQ 464
I ++ PL L L + S+ I FL + +L T + K +
Sbjct: 496 IDADFPHPL-RLRLMGVRISSFPNEEDRKHQQRSIIGFLQAGNQALSATECTLEKTDKDK 554
Query: 465 GSGPAVTATKKATTSLESFFQKAAERQKVKEASLSSLTAPTQAPMSNSPSKPSLPFQTSQ 524
P + KK SFF K +K A + FQTSQ
Sbjct: 555 FVKPLEMSHKK------SFFDKKRSERKWSHQDTFKCEAVNKQ-----------SFQTSQ 597
Query: 525 STGTEPFFKQKSLLLKQKQLNNSSVSSPQQNPWSNCKALPNSLPTEYPGCVPVC---EGV 581
PF +LK+K N +S +C+ L PVC +G
Sbjct: 598 -----PF-----QVLKKKMNENLEISENS----DDCQIL----------TCPVCFRAQGC 633
Query: 582 SKLEESSKATPAEMDLAHNSQSMHASSASK-SVLEVTQKA-TPNPSLLAAED 631
LE +K +D S++ S S S +V +K P SL +D
Sbjct: 634 ISLEALNKHVDECLDGPSISENFKMFSCSHVSATKVNKKENVPASSLCEKQD 685
>gi|84043967 REV1-like isoform 2 [Homo sapiens]
Length = 1250
Score = 69.3 bits (168), Expect = 1e-11
Identities = 45/169 (26%), Positives = 81/169 (47%), Gaps = 3/169 (1%)
Query: 200 MRAAIERETGFQCSAGISHNKVLAKLACGLNKPNRQTLVSHGSVPQLFSQMPIRKIRSLG 259
+R I+ +T S GI N +LA++A KP+ Q + V + + +G
Sbjct: 593 VRMEIKDQTKCAASVGIGSNILLARMATRKAKPDGQYHLKPEEVDDFIRGQLVTNLPGVG 652
Query: 260 GKLGASVIEILGIEYMGELTQFTESQLQSHFGEKNGSWLYAMCRGIEHDPVKPRQLPKTI 319
+ S + LGI+ G+L T ++LQ FG K G LY CRG++ PV+ + K++
Sbjct: 653 HSM-ESKLASLGIKTCGDLQYMTMAKLQKEFGPKTGQMLYRFCRGLDDRPVRTEKERKSV 711
Query: 320 GCSKNFPGKTALATREQVQWWLLQLAQELEERLTKDRNDNDRVATQLVV 368
N+ ++ + +LL L++E++ RL R+ +++V
Sbjct: 712 SAEINY--GIRFTQPKEAEAFLLSLSEEIQRRLEATGMKGKRLTLKIMV 758
Score = 51.2 bits (121), Expect = 3e-06
Identities = 47/167 (28%), Positives = 62/167 (37%), Gaps = 58/167 (34%)
Query: 12 VDMDCFFVQVEQRQNPHLRNKPCAVV-----------------------QYKSWKGGG-- 46
VDMDCFFV V R P L+ KP AV Q K KG
Sbjct: 422 VDMDCFFVSVGIRNRPDLKGKPVAVTSNRGTGRAPLRPGANPQLEWQYYQNKILKGKADI 481
Query: 47 -------------------------IIAVSYEARAFGVTRSMWADDAKKLCPDLLLAQVR 81
I + SYEAR G+ M+ AK+LCP+L
Sbjct: 482 PDSSLWENPDSAQANGIDSVLSRAEIASCSYEARQLGIKNGMFFGHAKQLCPNLQAVPY- 540
Query: 82 ESRGKANLTKYREASVEVMEIMSRFA-VIERASIDEAYVDLTSAVQE 127
+ Y+E + + E ++ + IE S DEA VD+T + E
Sbjct: 541 ------DFHAYKEVAQTLYETLASYTHNIEAVSCDEALVDITEILAE 581
>gi|7706681 REV1-like isoform 1 [Homo sapiens]
Length = 1251
Score = 69.3 bits (168), Expect = 1e-11
Identities = 45/169 (26%), Positives = 81/169 (47%), Gaps = 3/169 (1%)
Query: 200 MRAAIERETGFQCSAGISHNKVLAKLACGLNKPNRQTLVSHGSVPQLFSQMPIRKIRSLG 259
+R I+ +T S GI N +LA++A KP+ Q + V + + +G
Sbjct: 594 VRMEIKDQTKCAASVGIGSNILLARMATRKAKPDGQYHLKPEEVDDFIRGQLVTNLPGVG 653
Query: 260 GKLGASVIEILGIEYMGELTQFTESQLQSHFGEKNGSWLYAMCRGIEHDPVKPRQLPKTI 319
+ S + LGI+ G+L T ++LQ FG K G LY CRG++ PV+ + K++
Sbjct: 654 HSM-ESKLASLGIKTCGDLQYMTMAKLQKEFGPKTGQMLYRFCRGLDDRPVRTEKERKSV 712
Query: 320 GCSKNFPGKTALATREQVQWWLLQLAQELEERLTKDRNDNDRVATQLVV 368
N+ ++ + +LL L++E++ RL R+ +++V
Sbjct: 713 SAEINY--GIRFTQPKEAEAFLLSLSEEIQRRLEATGMKGKRLTLKIMV 759
Score = 50.8 bits (120), Expect = 4e-06
Identities = 47/168 (27%), Positives = 62/168 (36%), Gaps = 59/168 (35%)
Query: 12 VDMDCFFVQVEQRQNPHLRNKPCAVV-----------------------QYKSWKGGG-- 46
VDMDCFFV V R P L+ KP AV Q K KG
Sbjct: 422 VDMDCFFVSVGIRNRPDLKGKPVAVTSNRGTGRAPLRPGANPQLEWQYYQNKILKGKAAD 481
Query: 47 --------------------------IIAVSYEARAFGVTRSMWADDAKKLCPDLLLAQV 80
I + SYEAR G+ M+ AK+LCP+L
Sbjct: 482 IPDSSLWENPDSAQANGIDSVLSRAEIASCSYEARQLGIKNGMFFGHAKQLCPNLQAVPY 541
Query: 81 RESRGKANLTKYREASVEVMEIMSRFA-VIERASIDEAYVDLTSAVQE 127
+ Y+E + + E ++ + IE S DEA VD+T + E
Sbjct: 542 -------DFHAYKEVAQTLYETLASYTHNIEAVSCDEALVDITEILAE 582
>gi|239758058 PREDICTED: similar to mucin, partial [Homo sapiens]
Length = 967
Score = 43.1 bits (100), Expect = 9e-04
Identities = 50/245 (20%), Positives = 96/245 (39%), Gaps = 21/245 (8%)
Query: 386 ALTRYDAHKMSHDAFTVIKNCNTSGIQTEWSPPLTMLFLCATKFSASAPSSSTDITSFLS 445
++T + S +FT + T+ T SPP + T+ ++ +P S T +
Sbjct: 228 SITTIETTSHSTPSFTSLM---TTTETTSLSPPAFTFSISTTETNSHSPPSFTSSIATTE 284
Query: 446 SDPSSLPKVPVTSSEAKTQGSGP-----AVTATKKATTSLESFFQKAAERQKVKEA--SL 498
+ S P + ++ P +T T+ + S SF A + S
Sbjct: 285 TPSHSPPSFTSLITTTESTSHSPLSFTSVITTTESTSHSTPSFTSSIATTETTSHTPPSF 344
Query: 499 SSLTAPTQAPMSNSPSKPSLPFQTSQSTGTEPFFKQKSLLLKQKQLNNSSVSSPQQNPWS 558
+SL T+ P ++PS SL T ++ + P F + + ++S ++
Sbjct: 345 TSLITTTETPSHSNPSFTSLITATESTSHSPPSF--------TSAIATTGITSHSTPIFT 396
Query: 559 NCKALPNSLPTEYPGCVPVCEGVSKLEESSKATPAEMDLAHNSQSMHASSASKSVLEVTQ 618
+ A +S P ++ E S +TP+ L +++ S+ S + L T
Sbjct: 397 SLIATTDSTSHSTPS---FTSSITSTETISHSTPSFSSLITATKTTSHSTPSLTSLITTT 453
Query: 619 KATPN 623
K+TP+
Sbjct: 454 KSTPH 458
Score = 38.5 bits (88), Expect = 0.022
Identities = 40/163 (24%), Positives = 66/163 (40%), Gaps = 6/163 (3%)
Query: 395 MSHDAFTVIKNCNTSGIQTEWSPPLTMLFLCATKFSASAPSSSTDITSFLSSDPSSLPKV 454
MSH + TS + + P T L S S PS + +TS ++ S L
Sbjct: 748 MSHSIPGFASSITTSETTSPFPPRFTSLITTTKTTSHSPPSFTASLTSTEATSHSPLSFT 807
Query: 455 PVTSSEAKTQGSGPAVTA--TKKATTSLESF-FQKAAERQKVKE---ASLSSLTAPTQAP 508
V +S T S P++T+ T T+S + + + K AS +SL A T+
Sbjct: 808 SVIASTKITSQSTPSLTSLITTTGTSSHNTLGLSSSVDTTKTTSHSTASFTSLIATTETT 867
Query: 509 MSNSPSKPSLPFQTSQSTGTEPFFKQKSLLLKQKQLNNSSVSS 551
N+P S T ++ + P F ++ ++ S +S
Sbjct: 868 SHNTPGFTSSIATTEITSHSTPSFTSSITTMETTSRSSPSFTS 910
Score = 36.2 bits (82), Expect = 0.11
Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 10/121 (8%)
Query: 416 SPPLTMLFLCATKFSASAPSSSTDITS---FLSSDPSSLPKVPVTSSEAKTQGSGPA-VT 471
+P LT L S PS ++ IT+ S PS + +T S + + S P+ +T
Sbjct: 616 TPSLTSLITTIETTSHCTPSLTSSITTSGTISHSTPSFTSLITITESTSHSTTSFPSSIT 675
Query: 472 ATKKATTSLESFFQKAAERQKVKEA--SLSSLTAPTQAPMSNSPSKPSLPFQTSQSTGTE 529
T+ + S SF A + + + S +S A T+ P S S PS PF + +T T
Sbjct: 676 TTETTSHSTPSFTSLIATTEIISHSTPSYTSSIATTETP---SHSTPSFPFSIT-TTETI 731
Query: 530 P 530
P
Sbjct: 732 P 732
Score = 35.8 bits (81), Expect = 0.14
Identities = 68/330 (20%), Positives = 120/330 (36%), Gaps = 37/330 (11%)
Query: 396 SHDAFTVIKNCNTSGIQTEWSPPLTMLFLCATKFSASAPSSSTDIT---SFLSSDPSSLP 452
SH + + T+ ++ P T S S PS ++ IT + S PS
Sbjct: 66 SHSTASFTSSIATTETMSQNIPGFTSSIATTEITSHSTPSFTSSITTTETTSQSSPSFTS 125
Query: 453 KVPVTSSEAKTQGS-GPAVTATKKATTSLESFFQKAAERQKVKEASLS--SLTAPTQAPM 509
+ +T S + + S ++T T+ + S S ++ +SLS S A ++ P
Sbjct: 126 LITITGSTSHSTASFTSSITTTETTSHSTRSITSSITTTKRTSHSSLSYTSSIATSETPS 185
Query: 510 SNSPSKPSL-----------PFQTSQSTGTE------PFFKQKSLLLKQKQLNNSSVSSP 552
PS SL P TS T TE P F ++ + S +S
Sbjct: 186 HTVPSFTSLITTTESTSHSNPSLTSAITTTETRSHSPPIFTSSITTIETTSHSTPSFTSL 245
Query: 553 QQNPWSNCKALP------NSLPTEYPGCVPVCEGVSKLEESSKATPAEMDLAHNSQS-MH 605
+ + P ++ T ++ E S + P+ L ++S H
Sbjct: 246 MTTTETTSLSPPAFTFSISTTETNSHSPPSFTSSIATTETPSHSPPSFTSLITTTESTSH 305
Query: 606 ASSASKSVL---EVTQKATPNPSLLAAEDQVPCE---KCGSLVPVWDMPEHMDYHFALEL 659
+ + SV+ E T +TP+ + A + SL+ + P H + F +
Sbjct: 306 SPLSFTSVITTTESTSHSTPSFTSSIATTETTSHTPPSFTSLITTTETPSHSNPSFTSLI 365
Query: 660 QKSFLQPHSSNPQVVSAVSHQGKRNPKSPL 689
+ HS P SA++ G + +P+
Sbjct: 366 TATESTSHSP-PSFTSAIATTGITSHSTPI 394
Score = 32.3 bits (72), Expect = 1.6
Identities = 54/245 (22%), Positives = 88/245 (35%), Gaps = 11/245 (4%)
Query: 396 SHDAFTVIKNCNTSGIQTEWSPPLTMLFLCATKFSASAPSSSTDITSFLSSDPSSLPKVP 455
+ D T + T+ T SPP + +TK ++ + S T + + S P
Sbjct: 493 NRDHLTQFTSLITTTKTTSHSPPSFTALITSTKTTSHSTPSFTSSIATTETTSHSPPSFT 552
Query: 456 VTSSEAKTQG-SGPAVT---ATKKATTSLESFFQKAAERQKVKEASLSSLTAPTQAPMSN 511
+S+ +T S P + AT K T++ F A K S T + +
Sbjct: 553 SSSTTTETHSHSTPGFSSSIATSKTTSTSPPRFTFAIATTKTTLHSTPRFTLAIASTKTT 612
Query: 512 SPSKPSLPFQTSQSTGTEPFFK-QKSLLLKQKQLNNSSVSSPQQNPWSNCKALPNSLPTE 570
S S PSL TS T E SL S S+P + T
Sbjct: 613 SHSTPSL---TSLITTIETTSHCTPSLTSSITTSGTISHSTPSFTSLITITESTSHSTTS 669
Query: 571 YPGCVPVCEGVSKLEESSKATPAEMDLAHNSQSMHASSASKSVLEVTQKATPN-PSLLAA 629
+P + E S S + A ++ +S + SS + + E +TP+ P +
Sbjct: 670 FPSSITTTETTSHSTPSFTSLIATTEIISHSTPSYTSSIATT--ETPSHSTPSFPFSITT 727
Query: 630 EDQVP 634
+ +P
Sbjct: 728 TETIP 732
>gi|239752529 PREDICTED: similar to mucin [Homo sapiens]
Length = 594
Score = 41.6 bits (96), Expect = 0.003
Identities = 60/311 (19%), Positives = 115/311 (36%), Gaps = 35/311 (11%)
Query: 386 ALTRYDAHKMSHDAFTVIKNCNTSGIQTEWSPPLTMLFLCATKFSASAPSSSTDITSFLS 445
++T + S +FT + T+ T SPP + T+ ++ +P S T +
Sbjct: 57 SITTIETTSHSTPSFTSLM---TTTETTSLSPPAFTFSISTTETNSHSPPSFTSSIATTE 113
Query: 446 SDPSSLPKVPVTSSEAKTQGSGP-----AVTATKKATTSLESFFQKAAERQKVKEA--SL 498
+ S P + ++ P +T T+ + S SF A + S
Sbjct: 114 TPSHSPPSFTSLITTTESTSHSPLSFTSVITTTESTSHSTPSFTSSIATTETTSHTPPSF 173
Query: 499 SSLTAPTQAPMSNSPSKPSLPFQTSQSTGTEPFFKQKSLLLKQKQLNNSSVSSPQQNPWS 558
+SL T+ P ++PS SL T ++ + P F + + ++S ++
Sbjct: 174 TSLITTTETPSHSNPSFTSLITATESTSHSPPSF--------TSAIATTGITSHSTPIFT 225
Query: 559 NCKALPNSLPTEYPGCVPVCEGVSKLEESSKATPAEMDL-AHNSQSMHASSASKSVLEVT 617
+ A +S P ++ E S +TP+ L + H++ + S++ T
Sbjct: 226 SLIATTDSTSHSTPS---FTSSITSTETISHSTPSFSSLITATKTTSHSTPSLTSLITTT 282
Query: 618 QKATPNPSLLAAEDQVPCEKCGSLVPVWDMPEHMDYHFALELQKSFLQPHSSNPQVVSAV 677
+ PSL SLV + H F + HS+ P + S++
Sbjct: 283 NTSHSTPSLT------------SLVTSTETASHSTPSFTSLITTIEATSHST-PSLTSSI 329
Query: 678 SHQGKRNPKSP 688
+ G + +P
Sbjct: 330 TTTGTTSHSTP 340
Score = 38.9 bits (89), Expect = 0.017
Identities = 53/242 (21%), Positives = 100/242 (41%), Gaps = 25/242 (10%)
Query: 396 SHDAFTVIKNCNTSGIQTEWSPPLTMLFLCATKFSASAPSSSTDITSFLSSDPSSLPKVP 455
SH + T+GI + +P T L S S PS ++ ITS + S+
Sbjct: 201 SHSPPSFTSAIATTGITSHSTPIFTSLIATTDSTSHSTPSFTSSITSTETISHSTPSFSS 260
Query: 456 VTSSEAKTQGSGPAVTA------TKKATTSLESFFQKAAERQKVKEASLSSLTAPTQAPM 509
+ ++ T S P++T+ T +T SL S + E S +SL +A
Sbjct: 261 LITATKTTSHSTPSLTSLITTTNTSHSTPSLTSLV-TSTETASHSTPSFTSLITTIEATS 319
Query: 510 SNSPSKPSLPFQTSQSTGTEPFFKQKSLLLKQKQLNNSSVSSPQQNPWSNCKALPNSLPT 569
++PS S T ++ + P F + + + + S++S + + + +S+
Sbjct: 320 HSTPSLTSSITTTGTTSHSTPSFTYLTTITESTSHSTPSLTS----AITTTETMSHSILG 375
Query: 570 EYPGCVPVCEGVSKLEESSKATPAEMDLAHNSQS-MHASSASKSVLEVTQKAT-PNPSLL 627
P + S +TP+ + L +++ H++ + S + TQ A+ PSL
Sbjct: 376 FTPSII------------SPSTPSYISLIATTETPSHSTPSFPSSITTTQSASHSTPSLT 423
Query: 628 AA 629
+A
Sbjct: 424 SA 425
>gi|91982772 mucin 17 [Homo sapiens]
Length = 4493
Score = 41.6 bits (96), Expect = 0.003
Identities = 80/328 (24%), Positives = 124/328 (37%), Gaps = 46/328 (14%)
Query: 401 TVIKNCNTSGIQT---EWSPPLTMLFLCATKFSASAPSSSTDITSFLSSDPS-------- 449
T + + TS + T + S P+T T AS+ D TS +S S
Sbjct: 3291 TTVASSETSTLSTTPADTSTPVT------TYSQASSSPPIADGTSMPTSTYSEGSTPLTN 3344
Query: 450 -SLPKVPVTSSEAKTQGSGPAVTATKKATTSLESFFQKAAERQKVKEASLSSLTAPTQAP 508
S PV SSEA T + P T+T T++ EASLS TA +
Sbjct: 3345 MSFSTTPVVSSEASTLSTTPVDTSTPVTTST---------------EASLSPTTAEGTSI 3389
Query: 509 MSNSPSKPSLPFQTSQSTGTEPFFKQKSLLLKQKQLNNSSVSSPQQNPWSNCKALPNSLP 568
++SPS+ + P + + T + + L +N+ V++ + S A SLP
Sbjct: 3390 PTSSPSEGTTPLASMPVSTTPVVSSEVNTLSTTPVDSNTLVTTSTEASSSPTIAEGTSLP 3449
Query: 569 TEYPGCVPVCEGVSKLEESSKATPAEMDLAHNSQSMHASSASKSVLEVTQKATPNPSLLA 628
T EG + L +T +A + S +++ + VT + N S
Sbjct: 3450 TS-----TTSEGSTPLSIMPLST---TPVASSEASTLSTTPVDTSTPVTTSSPTNSSPTT 3501
Query: 629 AE-DQVPCEKCG-SLVPVWDMPEHMDYHFALELQKSFLQPHSSNPQVVSAVSHQGKRNPK 686
AE +P G P+ +MP + E P SN V S S Q +P
Sbjct: 3502 AEVTSMPTSTAGEGSTPLTNMPVSTTPVASSEASTLSTTPVDSNTFVTS--SSQASSSPA 3559
Query: 687 SPLACTNKRPRP-EGMQTLESFFKPLTH 713
+ T + P EG +L + T+
Sbjct: 3560 TLQVTTMRMSTPSEGSSSLTTMLLSSTY 3587
Score = 40.8 bits (94), Expect = 0.004
Identities = 61/235 (25%), Positives = 97/235 (41%), Gaps = 33/235 (14%)
Query: 408 TSGIQTEWSPPLTMLFLCATKFSASAPSSSTDITSFLSSDPSS----LPKVPVT-----S 458
TS + T P+ L T S+ ++ + TS L+S S L +PV+ S
Sbjct: 348 TSEMSTLSITPVDTSTLVTTSTEPSSLPTTAEATSMLTSTLSEGSTPLTNMPVSTILVAS 407
Query: 459 SEAKTQGSGPAVTATKKATTSLESFFQKAAERQKVKEASLSSLTAPTQAPMSNSPSKPSL 518
SEA T + P + T T S EAS S TA + +++PS+ S
Sbjct: 408 SEASTTSTIPVDSKTFVTTAS---------------EASSSPTTAEDTSIATSTPSEGST 452
Query: 519 PFQTSQSTGTEPFFKQKSLLLKQKQLNNSS-VSSPQQNPWSNCKALPNSLPTEYP--GCV 575
P TS T P ++ L +++ + V++ + S A NS+PT P G
Sbjct: 453 PL-TSMPVSTTPVASSEASNLSTTPVDSKTQVTTSTEASSSPPTAEVNSMPTSTPSEGST 511
Query: 576 PVCE-GVSKL----EESSKATPAEMDLAHNSQSMHASSASKSVLEVTQKATPNPS 625
P+ VS + E+S + +D + + +S+S + E T T PS
Sbjct: 512 PLTSMSVSTMPVASSEASTLSTTPVDTSTPVTTSSEASSSSTTPEGTSIPTSTPS 566
Score = 40.0 bits (92), Expect = 0.008
Identities = 57/227 (25%), Positives = 88/227 (38%), Gaps = 47/227 (20%)
Query: 401 TVIKNCNTSGIQTEWSPPLTMLFLCATKFSASAPSSSTDI---TSFLSSDPSSLPKVPVT 457
T++ + TS + T +P T + + S+P+++ D TS S + L VPV+
Sbjct: 2348 TMVASFETSTLST--TPADTSTPVTTYSQAGSSPTTADDTSMPTSTYSEGSTPLTSVPVS 2405
Query: 458 -----SSEAKTQGSGPAVTATKKATTSLESFFQKAAERQKVKEASLSSLTAPTQA----- 507
SSEA T + P T+T T++ S AE + + S T P +
Sbjct: 2406 TMPVVSSEASTHSTTPVDTSTPVTTSTEASSSPTTAEGTSIPTSPPSEGTTPLASMPVST 2465
Query: 508 ---------PMSNSPSKPSLPFQTSQSTGTEP-----------FFKQKSLLLKQKQLNNS 547
+S +P S P TS + P + S LL ++ +
Sbjct: 2466 TPVVSSEAGTLSTTPVDTSTPMTTSTEASSSPTTAEDIVVPISTASEGSTLLTSIPVSTT 2525
Query: 548 SVSSPQQNPWSNCKALPNSLPTEYPGCVPVCEGVSKLEESSKATPAE 594
V+SP+ + S NS PV V+ E SS AT AE
Sbjct: 2526 PVASPEASTLSTTPVDSNS---------PV---VTSTEISSSATSAE 2560
Score = 39.3 bits (90), Expect = 0.013
Identities = 59/244 (24%), Positives = 100/244 (40%), Gaps = 37/244 (15%)
Query: 408 TSGIQTEWSPPLTMLFLCATKFSASAPSSSTDITSFLSSDP-------SSLPK--VPVTS 458
TS I T + P+ A + ++++ TS +S P +S+P PV S
Sbjct: 879 TSAISTLSTTPVDTSTPVTNSTEARSSPTTSEGTSMPTSTPGEGSTPLTSMPDSTTPVVS 938
Query: 459 SEAKTQGSGPAVTATKKATTSLESFFQKAAERQKVKEASLSSLTAPTQAPMSNSPSKPSL 518
SEA+T + P T+T T++ + AE + ++ S T P++++P +L
Sbjct: 939 SEARTLSATPVDTSTPVTTSTEATSSPTTAEGTSIPTSTPSEGT----TPLTSTPVSHTL 994
Query: 519 PFQTSQST-GTEPFFKQKSLLLKQKQLNNSSVSSPQQNPWSNCKALPNSLPTEYPGCVPV 577
+ ST T P L ++ SSP P + ++P S P+E G P+
Sbjct: 995 VANSEASTLSTTPVDSNTPL------TTSTEASSPP--PTAEGTSMPTSTPSE--GSTPL 1044
Query: 578 CE------GVSKLEESS-KATPAEMDLAHNSQSMHASSASKSVLEVTQKATPNPSLLAAE 630
V+ E S+ TPA+ + S +SS++ T T P+ +E
Sbjct: 1045 TRMPVSTTMVASSETSTLSTTPADTSTPVTTYSQASSSST------TADGTSMPTSTYSE 1098
Query: 631 DQVP 634
P
Sbjct: 1099 GSTP 1102
Score = 38.9 bits (89), Expect = 0.017
Identities = 49/224 (21%), Positives = 84/224 (37%), Gaps = 35/224 (15%)
Query: 427 TKFSASAPSSSTDITSFLSSDPSSLPK-------------VPVTSSEAKTQGSGPAVTAT 473
T+ + S +SS+ T+ ++S P+S P +PV SSEA T + P T+T
Sbjct: 481 TQVTTSTEASSSPPTAEVNSMPTSTPSEGSTPLTSMSVSTMPVASSEASTLSTTPVDTST 540
Query: 474 KKATTSLESFFQKAAERQKVKEASLSSLTAPTQAPMSNSPSKPSLPFQTSQSTGTEPFFK 533
T+S S E + +S + P++N P L + ST +
Sbjct: 541 PVTTSSEASSSSTTPEGTSIP----TSTPSEGSTPLTNMPVSTRLVVSSEASTTSTTPAD 596
Query: 534 QKSLLLKQKQLNNSSVSSPQQNPWSNCKALPNSLPTEYPGCVPVCEGVSKLEESSKA--- 590
+ + + ++SS + + ++P S +E + + L SS+A
Sbjct: 597 SNTFVTTSSEASSSSTT-------AEGTSMPTSTYSERGTTITSMSVSTTLVASSEASTL 649
Query: 591 --------TPAEMDLAHNSQSMHASSASKSVLEVTQKATPNPSL 626
TP S S A S T+ +TP S+
Sbjct: 650 STTPVDSNTPVTTSTEATSSSTTAEGTSMPTSTYTEGSTPLTSM 693
Score = 38.9 bits (89), Expect = 0.017
Identities = 33/113 (29%), Positives = 47/113 (41%), Gaps = 19/113 (16%)
Query: 426 ATKFSASAPSSSTDITSFLSSDP-------SSLP--KVPVTSSEAKTQGSGPAVTATKKA 476
AT AS+P + ++TS +S P +S+P PV SSEA T + P T+T
Sbjct: 1192 ATSTEASSPPPTAEVTSMPTSTPGERSTPLTSMPVRHTPVASSEASTLSTSPVDTSTPVT 1251
Query: 477 TTSLESFFQKAAERQKVKEASLSSLTAPTQAPMSNSPSKPSLPFQTSQSTGTE 529
T++ S AE + PT S S+P T+ T E
Sbjct: 1252 TSAETSSSPTTAE----------GTSLPTSTTSEGSTLLTSIPVSTTLVTSPE 1294
Score = 37.0 bits (84), Expect = 0.064
Identities = 37/146 (25%), Positives = 61/146 (41%), Gaps = 23/146 (15%)
Query: 408 TSGIQTEWSPPLTMLFLCATKFSASAPSSSTDITSFLSSDPS-------SLP--KVPVTS 458
+S I T + P+ A + ++++ TS +S PS S+P +PV +
Sbjct: 2175 SSAISTLSTTPVDTSTPVTNSTEARSSPTTSEGTSMPTSTPSEGSTPFTSMPVSTMPVVT 2234
Query: 459 SEAKTQGSGPAVTATKKATTSLESFFQKAAERQKVKEASLSSLTAP-TQAP--------- 508
SEA T + P T+T T++ + AE + ++LS T P T P
Sbjct: 2235 SEASTLSATPVDTSTPVTTSTEATSSPTTAEGTSIPTSTLSEGTTPLTSIPVSHTLVANS 2294
Query: 509 ----MSNSPSKPSLPFQTSQSTGTEP 530
+S +P + PF TS + P
Sbjct: 2295 EVSTLSTTPVDSNTPFTTSTEASSPP 2320
Score = 37.0 bits (84), Expect = 0.064
Identities = 51/214 (23%), Positives = 80/214 (37%), Gaps = 43/214 (20%)
Query: 427 TKFSASAPSS-STDITSFLSSDPSSLPKVPVTSSEAKTQGSGPAVTATKKATTSLESFFQ 485
T S PS ST +TS L S +PV SSEA T + P T T T++ S
Sbjct: 2621 TSMPISTPSEVSTSLTSILVST------MPVASSEASTLSTTPVDTRTLVTTSTGTSSSP 2674
Query: 486 KAAERQKVKEASLSSLTAP--------------TQAPMSNSPSKPSLPFQTSQSTGTEPF 531
AE + ++ + P + +S +P S P TS + P
Sbjct: 2675 TTAEGSSMPTSTPGERSTPLTNILVSTTLLANSEASTLSTTPVDTSTPVTTSAEASSSPT 2734
Query: 532 FKQKSLLLKQKQLNNSSVSSPQQNPWSNCKALPNSLPTEYPGCVPVCEGVSKLEESSKAT 591
+ + + +S+P L ++LP V+ E S+ +T
Sbjct: 2735 TAEGT---------SMRISTPSDGSTPLTSILVSTLP------------VASSEASTVST 2773
Query: 592 PAEMDLAHNSQSMHASSASKSVLEVTQKATPNPS 625
A +D + + +S+S + EVT T PS
Sbjct: 2774 TA-VDTSIPVTTSTEASSSPTTAEVTSMPTSTPS 2806
Score = 36.2 bits (82), Expect = 0.11
Identities = 46/203 (22%), Positives = 82/203 (40%), Gaps = 17/203 (8%)
Query: 427 TKFSASAPSSS-TDITSFLSSDPSSLPKVPVTSSEAKTQGSGPAVTATKKATTSLESFFQ 485
T S P+S+ T+ ++ L+S P+S +PV +SE T P T+T T++ S
Sbjct: 318 TAEGTSIPTSTYTEGSTPLTSTPAST--MPVATSEMSTLSITPVDTSTLVTTSTEPSSLP 375
Query: 486 KAAERQKVKEASLSSLTAPTQAPMSNSPSKPSLPFQTSQSTGTEPFFKQKSLLLKQKQLN 545
AE + L+S + P++N P L + ST + K+ + + +
Sbjct: 376 TTAEATSM----LTSTLSEGSTPLTNMPVSTILVASSEASTTSTIPVDSKTFVTTASEAS 431
Query: 546 NSSVSSPQQNPWSNCKALPNSLPTEYP---GCVPVCEGVSKLEESSKATPAEMDLAHNSQ 602
+S ++ ++ S P+E +PV E+S + +D
Sbjct: 432 SSPTTAED-------TSIATSTPSEGSTPLTSMPVSTTPVASSEASNLSTTPVDSKTQVT 484
Query: 603 SMHASSASKSVLEVTQKATPNPS 625
+ +S+S EV T PS
Sbjct: 485 TSTEASSSPPTAEVNSMPTSTPS 507
Score = 36.2 bits (82), Expect = 0.11
Identities = 50/228 (21%), Positives = 86/228 (37%), Gaps = 17/228 (7%)
Query: 427 TKFSASAPSSSTDITSFLSSDPS-------SLP--KVPVTSSEAKTQGSGPAVTATKKAT 477
T AS+ ++ ++TS +S PS S+P PV SSEA T + P T+T T
Sbjct: 2784 TSTEASSSPTTAEVTSMPTSTPSETSTPLTSMPVNHTPVASSEAGTLSTTPVDTSTPVTT 2843
Query: 478 TSLESFFQKAAERQKVKEASLS-SLTAPTQAPMSNSPSKPSLPFQTSQSTGTEPFFKQKS 536
++ S AE V ++ S T T P+S +P S + + T P
Sbjct: 2844 STKASSSPTTAEGIVVPISTASEGSTLLTSIPVSTTPVASS----EASTLSTTPVDTSIP 2899
Query: 537 LLLKQKQLNNSSVSSPQQNPWSNCKALPNSLPTEYPGCVPVCEGVSKLEESSKA---TPA 593
+ + ++ + + P S + L + VPV + ++ TP
Sbjct: 2900 VTTSTEGSSSPTTAEGTSMPISTPSEVSTPLTSILVSTVPVAGSEASTLSTTPVDTRTPV 2959
Query: 594 EMDLAHNSQSMHASSASKSVLEVTQKATPNPSLLAAEDQVPCEKCGSL 641
+S A S + ++ TP S+ + V + +L
Sbjct: 2960 TTSAEASSSPTTAEGTSMPISTPGERRTPLTSMSVSTMPVASSEASTL 3007
Score = 35.4 bits (80), Expect = 0.18
Identities = 46/198 (23%), Positives = 80/198 (40%), Gaps = 34/198 (17%)
Query: 408 TSGIQTEWSPPLTMLFLCATKFSASAPSSSTDITSFLSSDPS-------SLP--KVPVTS 458
+S I T + P+ T A + ++++ TS +S PS S+P PV S
Sbjct: 1704 SSAISTLSTTPVDNSTPVTTSTEARSSPTTSEGTSMPNSTPSEGTTPLTSIPVSTTPVLS 1763
Query: 459 SEAKTQGSGPAVTATKKATTSLESFFQKAAERQKVKEASLS-SLTAPTQAP--------- 508
SEA T + P T+T T++ + AE + ++LS +T T P
Sbjct: 1764 SEASTLSATPIDTSTPVTTSTEATSSPTTAEGTSIPTSTLSEGMTPLTSTPVSHTLVANS 1823
Query: 509 ----MSNSPSKPSLPFQTSQSTGTEP-----------FFKQKSLLLKQKQLNNSSVSSPQ 553
+S +P + P TS + + P + S L ++ ++V+S +
Sbjct: 1824 EASTLSTTPVDSNSPVVTSTAVSSSPTPAEGTSIATSTPSEGSTALTSIPVSTTTVASSE 1883
Query: 554 QNPWSNCKALPNSLPTEY 571
N S A+ ++ T Y
Sbjct: 1884 TNTLSTTPAVTSTPVTTY 1901
Score = 35.4 bits (80), Expect = 0.18
Identities = 55/224 (24%), Positives = 83/224 (37%), Gaps = 31/224 (13%)
Query: 427 TKFSASAPSSSTDITSFLSSDPSSLP-------------KVPVTSSEAKTQGSGPAVTAT 473
T + SA +SS+ T+ +S P S P +PV SSEA T PA T+T
Sbjct: 2957 TPVTTSAEASSSPTTAEGTSMPISTPGERRTPLTSMSVSTMPVASSEASTLSRTPADTST 3016
Query: 474 KKATTSLESFFQKAAERQKVKEASLSSLTAPTQAPMSNSPSKPSLPFQTSQSTGTEPFFK 533
T++ EAS S TA ++PS+ S P + + T
Sbjct: 3017 PVTTST---------------EASSSPTTAEGTGIPISTPSEGSTPLTSIPVSTTPVAIP 3061
Query: 534 QKSLLLKQKQLNNSSVSSPQQNPWSNCKALPNSLP--TEYPGCVPVC-EGVSKLEESSKA 590
+ S L +NS V + + S A S+P T G P+ VS +S A
Sbjct: 3062 EASTLSTTPVDSNSPVVTSTEVSSSPTPAEGTSMPISTYSEGSTPLTGVPVSTTPVTSSA 3121
Query: 591 TPAEMDLAHNSQSMHASSASKSVLEVTQKATPNPSLLAAEDQVP 634
++ + +S T + T P+ +E P
Sbjct: 3122 ISTLSTTPVDTSTPVTTSTEAHSSPTTSEGTSMPTSTPSEGSTP 3165
Score = 35.0 bits (79), Expect = 0.24
Identities = 64/288 (22%), Positives = 107/288 (37%), Gaps = 54/288 (18%)
Query: 401 TVIKNCNTSGIQT---EWSPPLTMLFLCATKFSASAPSSSTDITSFLSSDPSS------- 450
T++ N S + T + S P+T T AS+ ++ + TS S PS
Sbjct: 2702 TLLANSEASTLSTTPVDTSTPVT------TSAEASSSPTTAEGTSMRISTPSDGSTPLTS 2755
Query: 451 --LPKVPVTSSEAKTQGSGPAVTATKKATTSLESFFQKAAERQKVKEASLSSLTAP-TQA 507
+ +PV SSEA T + T+ T++ S AE + ++ S + P T
Sbjct: 2756 ILVSTLPVASSEASTVSTTAVDTSIPVTTSTEASSSPTTAEVTSMPTSTPSETSTPLTSM 2815
Query: 508 P-------------MSNSPSKPSLPFQTSQSTGTEP-----------FFKQKSLLLKQKQ 543
P +S +P S P TS + P + S LL
Sbjct: 2816 PVNHTPVASSEAGTLSTTPVDTSTPVTTSTKASSSPTTAEGIVVPISTASEGSTLLTSIP 2875
Query: 544 LNNSSVSSPQQNPWSNC---KALPNSLPTEYPGCVPVCEGVSKLEESSKATPAEMDLAHN 600
++ + V+S + + S ++P + TE EG S +TP+E+
Sbjct: 2876 VSTTPVASSEASTLSTTPVDTSIPVTTSTEGSSSPTTAEGTS----MPISTPSEVSTPLT 2931
Query: 601 S---QSMHASSASKSVLEVTQKATPNPSLLAAE-DQVPCEKCGSLVPV 644
S ++ + + S L T T P +AE P G+ +P+
Sbjct: 2932 SILVSTVPVAGSEASTLSTTPVDTRTPVTTSAEASSSPTTAEGTSMPI 2979
Score = 35.0 bits (79), Expect = 0.24
Identities = 35/117 (29%), Positives = 52/117 (44%), Gaps = 16/117 (13%)
Query: 413 TEWSPPLTMLFLCATKFSASAPSSSTDITSFLSSDPSSLPKVPVTSSEAKTQGSGPAVTA 472
+E S PLT + + T+ ++S S+ S PS + PVT+S S A
Sbjct: 3690 SEGSTPLTTMPVSTTRVTSSEGSTL--------STPSVVTSTPVTTSTEAISSS-----A 3736
Query: 473 TKKATTSLESFFQKAAERQKVKEASLSSLTAPTQAPMSNSPSKPSLPFQTSQSTGTE 529
T +TT S E + L S T T+ P S++PS PS+ S +T +E
Sbjct: 3737 TLDSTTMSVSM---PMEISTLGTTILVSTTPVTRFPESSTPSIPSVYTSMSMTTASE 3790
Score = 34.3 bits (77), Expect = 0.41
Identities = 55/224 (24%), Positives = 83/224 (37%), Gaps = 28/224 (12%)
Query: 411 IQTEWSPPLTMLFLCATKFS-------ASAPSSSTDITSFLSSDPSSLPKVPVT---SSE 460
I +E S PLT L + T + AS P T T S+D +S P +PV S
Sbjct: 3868 ITSERSTPLTTLLVSTTLPTSFPGASIASTPPLDTSTTFTPSTDTASTPTIPVATTISVS 3927
Query: 461 AKTQGSGPAVTATKKATTSLESFFQKAAERQKVKEASLSSLTAPT-QAPMSNSPSKPSLP 519
T+GS P T +T S V A+ +++ P + N+PS S
Sbjct: 3928 VITEGSTPGTTIFIPSTPVTSS-------TADVFPATTGAVSTPVITSTELNTPSTSSSS 3980
Query: 520 FQTSQSTGTEPFFKQKSLLLKQKQLNNSSVSSPQQNPWSNCKALPNSL---PTEYPGCVP 576
TS ST E + + S+ S + C ++L T +
Sbjct: 3981 TTTSFSTTKEFTTPAMTTAAPLTYVTMSTAPSTPRTTSRGCTTSASTLSATSTPHTSTSV 4040
Query: 577 VCEGVSKLEESSKAT-------PAEMDLAHNSQSMHASSASKSV 613
V+ ESS+ + P AH+S S++S +V
Sbjct: 4041 TTRPVTPSSESSRPSTITSHTIPPTFPPAHSSTPPTTSASSTTV 4084
Score = 33.5 bits (75), Expect = 0.70
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 10/97 (10%)
Query: 427 TKFSASAPSSSTDITSFLSSDPS-------SLP--KVPVTSSEAKTQGSGPAVTATKKAT 477
T A + ++++ TS +S+PS S+P PV SSEA T + P T+T T
Sbjct: 1370 TSTEACSSPTTSEGTSMPNSNPSEGTTPLTSIPVSTTPVVSSEASTLSATPVDTSTPGTT 1429
Query: 478 TSLESFFQKAAERQKVKEASLSSLTAPTQA-PMSNSP 513
++ + AE + ++ S P ++ P+SN+P
Sbjct: 1430 SAEATSSPTTAEGISIPTSTPSEGKTPLKSIPVSNTP 1466
Score = 33.1 bits (74), Expect = 0.92
Identities = 49/195 (25%), Positives = 78/195 (40%), Gaps = 42/195 (21%)
Query: 430 SASAPSSSTDITSFLSSDPSS-LPKVPVT-----SSEAKTQGSGPAVTATKKATTSLESF 483
S+ P+ T I S+ S+ L +PV+ SSE + + PAVT+T T S S
Sbjct: 1494 SSPTPAEGTSIAISTPSEGSTALTSIPVSTTTVASSEINSLSTTPAVTSTPVTTYSQASS 1553
Query: 484 FQKAAERQKVKEASLSSLTAP-TQAPMS---------NSPSKPSLPFQTSQSTGTEPFF- 532
A+ ++ ++ S + P T P+S N+ S + +T + TE
Sbjct: 1554 SPTTADGTSMQTSTYSEGSTPLTSLPVSTMLVVSSEANTLSTTPIDSKTQVTASTEASSS 1613
Query: 533 -------------KQKSLLLKQKQLNNSSVSSPQQNPWSNCKALPNSLPTEYPGCVPVCE 579
+ S LL ++ + V+SP+ + S NS PV
Sbjct: 1614 TTAEGSSMTISTPSEGSPLLTSIPVSTTPVASPEASTLSTTPVDSNS---------PV-- 1662
Query: 580 GVSKLEESSKATPAE 594
++ E SS TPAE
Sbjct: 1663 -ITSTEVSSSPTPAE 1676
Score = 31.6 bits (70), Expect = 2.7
Identities = 31/124 (25%), Positives = 47/124 (37%), Gaps = 28/124 (22%)
Query: 424 LCATKFSASAP-SSSTDITSFLSSDPSSLP-----------------KVPVTSSEAKTQG 465
L AT S P ++ST+ TS +++ +S+P PV SSEA
Sbjct: 3184 LSATPVDTSTPVTTSTEATSSTTAEGTSIPTSTPSEGMTPLTSVPVSNTPVASSEASILS 3243
Query: 466 SGPAVTATKKATTSLESFFQKAAERQKVKEASLSSLTAPTQAPMSNSPSKPSLPFQTSQS 525
+ P + T T++ S AE + PT P S S+P T+
Sbjct: 3244 TTPVDSNTPLTTSTEASSSPPTAE----------GTSMPTSTPSEGSTPLTSMPVSTTTV 3293
Query: 526 TGTE 529
+E
Sbjct: 3294 ASSE 3297
Score = 30.4 bits (67), Expect = 6.0
Identities = 38/128 (29%), Positives = 54/128 (42%), Gaps = 23/128 (17%)
Query: 426 ATKFSASAPSSSTDIT----SFLSSDPSS----LPKVP-----VTSSEAKTQGSGPAVTA 472
+T + SA +SS+ T S +S PS L ++P V SSEA T + PA T
Sbjct: 244 STPVTISAQASSSPTTAEGPSLSNSAPSGGSTPLTRMPLSVMLVVSSEASTLSTTPAATN 303
Query: 473 TKKATTSLESFFQKAAERQKVKEASLSSLTAP-TQAPMSNSPSKPS-------LPFQTSQ 524
T++ S AE + ++ + + P T P S P S P TS
Sbjct: 304 IPVITSTEASSSPTTAEGTSIPTSTYTEGSTPLTSTPASTMPVATSEMSTLSITPVDTST 363
Query: 525 --STGTEP 530
+T TEP
Sbjct: 364 LVTTSTEP 371
Score = 30.4 bits (67), Expect = 6.0
Identities = 49/219 (22%), Positives = 85/219 (38%), Gaps = 28/219 (12%)
Query: 426 ATKFSASAPSSSTDITSFL--SSDPSSLP--KVPVTSSEAKTQGSGPAVTATKKATTSLE 481
AT S +A +S +++ S+ +S+P V SSEA T + P T+T T++
Sbjct: 666 ATSSSTTAEGTSMPTSTYTEGSTPLTSMPVNTTLVASSEASTLSTTPVDTSTPVTTST-- 723
Query: 482 SFFQKAAERQKVKEASLSSLTA-----PTQAPMSNSPSKPSLPFQTSQSTGTEPFFKQKS 536
EAS S TA PT P S S+P + T +E +
Sbjct: 724 -------------EASSSPTTADGASMPTSTPSEGSTPLTSMPVSKTLLTSSEASTLSTT 770
Query: 537 LLLKQKQLNNSSVSSPQQNPWSNCKALPNSLPTE-YPGCVPVCEGVSKLEESSKATPAEM 595
L + S+ +S + ++P S P+E P + ++ + +T +
Sbjct: 771 PLDTSTHITTSTEASCSPTT-TEGTSMPISTPSEGSPLLTSIPVSITPVTSPEASTLSTT 829
Query: 596 DLAHNSQSMHASSASKSVLEVTQKATPNPSLLAAEDQVP 634
+ NS ++ S S + T P+ +E + P
Sbjct: 830 PVDSNSPVTTSTEVSSS--PTPAEGTSMPTSTYSEGRTP 866
Score = 30.0 bits (66), Expect = 7.8
Identities = 29/111 (26%), Positives = 44/111 (39%), Gaps = 11/111 (9%)
Query: 430 SASAPSSSTDITSFLSSDPSSLPKVPVTSSEAKTQGSGPAVTATKKATTSLESFFQKAA- 488
+ + P S+T S L + P ++ SEA T + P T+T T++ F A
Sbjct: 3801 TTTMPMSTTSERSTLLTTVLISPISVMSPSEASTLSTPPGDTSTPLLTSTKAGSFSIPAE 3860
Query: 489 ----------ERQKVKEASLSSLTAPTQAPMSNSPSKPSLPFQTSQSTGTE 529
ER L S T PT P ++ S P L T+ + T+
Sbjct: 3861 VTTIRISITSERSTPLTTLLVSTTLPTSFPGASIASTPPLDTSTTFTPSTD 3911
>gi|239743232 PREDICTED: hypothetical protein XP_002342775 [Homo
sapiens]
Length = 834
Score = 40.8 bits (94), Expect = 0.004
Identities = 53/227 (23%), Positives = 77/227 (33%), Gaps = 29/227 (12%)
Query: 416 SPPLTMLFLCATKFSASA------PSSSTDITSF--LSSDPSSLPKVPVTSSEAKTQGSG 467
+PP T+L L A P+ + T+ +S PS PK T S
Sbjct: 240 NPPTTLLGLIPAPSMVPATDTKAPPTLQAETTTKPQATSAPSPAPKQSFLFGTQNTSPSS 299
Query: 468 PAVTATKKATTSLESFFQKAAERQKVKEASLSSLTAPTQAPMSNSPSKPSLPFQTSQSTG 527
PA A A+ + F + +K T P + + +PS SLP TS +
Sbjct: 300 PAAPAASSASPMFKPIFTAPPKSEK------EGPTPPGPSVSATAPSSSSLPTTTSTTAP 353
Query: 528 T-EPFFKQKSLLLKQKQLNNSSVSSPQQNPWSNCKALPNSLPTE----YPGCVPVCEGVS 582
T +P F S P P+ P + PT + G V+
Sbjct: 354 TFQPVFSSM----------GPPASVPLPAPFFKQTTTPATAPTTTAPLFTGLASATSAVA 403
Query: 583 KLEESSKATPAEMDLAHNSQSMHASSASKSVLEVTQKATPNPSLLAA 629
+ +S +T + A SS+S S T A P L A
Sbjct: 404 PITSASPSTDSASKPAFGFGINSVSSSSVSTTTSTATAASQPFLFGA 450
Score = 36.6 bits (83), Expect = 0.083
Identities = 55/242 (22%), Positives = 94/242 (38%), Gaps = 49/242 (20%)
Query: 416 SPPLTMLFLCATKFSASAPSSSTDITSFLSSDPSSLPKVPVTSSEAKTQGS-----GPAV 470
S PL F T A+AP+++ + + L+S S++ P+TS+ T + G +
Sbjct: 367 SVPLPAPFFKQTTTPATAPTTTAPLFTGLASATSAV--APITSASPSTDSASKPAFGFGI 424
Query: 471 TATKKATTSLESFFQKAAERQKV---KEASLSSLTAPTQAPMSNSPSKPSLPFQTSQSTG 527
+ ++ S + AA + + +AS +S T P + P+LP T+ +T
Sbjct: 425 NSVSSSSVSTTTSTATAASQPFLFGAPQASAASFT-PAMGSIFQFGKPPALPTTTTVTTF 483
Query: 528 TEPFFKQKSLLLKQKQLNNSSVSSPQQNPWSNCKALPNSLPTEYPGCVPVCEGV-SKLEE 586
++ +LP ++PT G S L
Sbjct: 484 SQ--------------------------------SLPTAVPTATSSSAADFSGFGSTLAT 511
Query: 587 SSKATPAEMDLAHNSQSMHA-----SSASKSVLEVTQKATPNPSLLAAEDQVPCEKCGSL 641
S+ AT ++ L ++ S S++KS L A P P+ AAE Q P +L
Sbjct: 512 SAPATSSQPTLTFSNTSTPTFNIPFGSSAKSPLPSYPGANPQPAFGAAEGQPPGAAKPAL 571
Query: 642 VP 643
P
Sbjct: 572 TP 573
>gi|150378545 POM121 membrane glycoprotein (rat)-like [Homo sapiens]
Length = 987
Score = 40.0 bits (92), Expect = 0.008
Identities = 45/190 (23%), Positives = 64/190 (33%), Gaps = 21/190 (11%)
Query: 445 SSDPSSLPKVPVTSSEAKTQGSGPAVTATKKATTSLESFFQKAAERQKVKEASLSSLTAP 504
+S PS PK T S PA A A+ + F + +K T P
Sbjct: 428 TSAPSPAPKQSFLFGTQNTSPSSPAAPAASSASPMFKPIFTAPPKSEK------EGPTPP 481
Query: 505 TQAPMSNSPSKPSLPFQTSQSTGT-EPFFKQKSLLLKQKQLNNSSVSSPQQNPWSNCKAL 563
+ + +PS SLP TS + T +P F S P P+
Sbjct: 482 GPSVTATAPSSSSLPTTTSTTAPTFQPVFSSM----------GPPASVPLPAPFFKQTTT 531
Query: 564 PNSLPTE----YPGCVPVCEGVSKLEESSKATPAEMDLAHNSQSMHASSASKSVLEVTQK 619
P + PT + G V+ + +S +T + A SS+S S T
Sbjct: 532 PATAPTTTAPLFTGLASATSAVAPITSASPSTDSASKPAFGFGINSVSSSSVSTTTSTAT 591
Query: 620 ATPNPSLLAA 629
A P L A
Sbjct: 592 AASQPFLFGA 601
Score = 36.6 bits (83), Expect = 0.083
Identities = 55/242 (22%), Positives = 94/242 (38%), Gaps = 49/242 (20%)
Query: 416 SPPLTMLFLCATKFSASAPSSSTDITSFLSSDPSSLPKVPVTSSEAKTQGS-----GPAV 470
S PL F T A+AP+++ + + L+S S++ P+TS+ T + G +
Sbjct: 518 SVPLPAPFFKQTTTPATAPTTTAPLFTGLASATSAV--APITSASPSTDSASKPAFGFGI 575
Query: 471 TATKKATTSLESFFQKAAERQKV---KEASLSSLTAPTQAPMSNSPSKPSLPFQTSQSTG 527
+ ++ S + AA + + +AS +S T P + P+LP T+ +T
Sbjct: 576 NSVSSSSVSTTTSTATAASQPFLFGAPQASAASFT-PAMGSIFQFGKPPALPTTTTVTTF 634
Query: 528 TEPFFKQKSLLLKQKQLNNSSVSSPQQNPWSNCKALPNSLPTEYPGCVPVCEGV-SKLEE 586
++ +LP ++PT G S L
Sbjct: 635 SQ--------------------------------SLPTAVPTATSSSAADFSGFGSTLAT 662
Query: 587 SSKATPAEMDLAHNSQSMHA-----SSASKSVLEVTQKATPNPSLLAAEDQVPCEKCGSL 641
S+ AT ++ L ++ S S++KS L A P P+ AAE Q P +L
Sbjct: 663 SAPATSSQPTLTFSNTSTPTFNIPFGSSAKSPLPSYPGANPQPAFGAAEGQPPGAAKPAL 722
Query: 642 VP 643
P
Sbjct: 723 TP 724
>gi|46519147 ankyrin repeat and KH domain containing 1 isoform 1 [Homo
sapiens]
Length = 2542
Score = 39.7 bits (91), Expect = 0.010
Identities = 42/151 (27%), Positives = 69/151 (45%), Gaps = 10/151 (6%)
Query: 422 LFLCATKFSASAPSSSTDITSFLSSDPSSLPKVPVTSSEAKTQGSGPAVTATKKATTSLE 481
LF C K S A S+ +TS SS PS + P+TS +A T + + + ++ +E
Sbjct: 1962 LFACVPKTSPPATVISS-VTSTCSSLPS-VSSAPITSGQAPTTFLPASTSQAQLSSQKME 2019
Query: 482 SFFQKAAERQKV--KEASLSSLTAPTQAPMSNSPSKPSLPFQTSQSTGTEPFFKQKSLLL 539
SF ++KV ++ +++L P+ S S S + P + P +
Sbjct: 2020 SFSAVPPTKEKVSTQDQPMANLCTPSSTANSCSSSASNTPGAPETHPSSSPTPTSSN--- 2076
Query: 540 KQKQLNNSSVS--SPQQNPW-SNCKALPNSL 567
Q++ SSVS SP P+ SN + P +L
Sbjct: 2077 TQEEAQPSSVSDLSPMSMPFASNSEPAPLTL 2107
Score = 32.0 bits (71), Expect = 2.0
Identities = 42/191 (21%), Positives = 70/191 (36%), Gaps = 19/191 (9%)
Query: 455 PVTSSEAKTQGSGPAVTATKKATTSLESFFQKAAERQKVKEASLSSLTAPTQAPMSNSPS 514
P+T S VT T+ ++ + F + +SS+T+ S+ PS
Sbjct: 1934 PITVSSVVAASQQLCVTNTRTPSSVRKQLFA-CVPKTSPPATVISSVTSTC----SSLPS 1988
Query: 515 KPSLPFQTSQSTGTE-PFFKQKSLLLKQKQLNNSSVS------SPQQNPWSNCKALPNSL 567
S P + Q+ T P ++ L QK + S+V S Q P +N P+S
Sbjct: 1989 VSSAPITSGQAPTTFLPASTSQAQLSSQKMESFSAVPPTKEKVSTQDQPMANL-CTPSST 2047
Query: 568 PTEYPGCVPVCEGVSKLEESSKATPAEMDLAHNSQSMHASSASKSVLEVTQKATP----- 622
G + SS TP + +Q S S + + P
Sbjct: 2048 ANSCSSSASNTPGAPETHPSSSPTPTSSNTQEEAQPSSVSDLSPMSMPFASNSEPAPLTL 2107
Query: 623 -NPSLLAAEDQ 632
+P ++AA++Q
Sbjct: 2108 TSPRMVAADNQ 2118
>gi|37620163 ANKHD1-EIF4EBP3 protein [Homo sapiens]
Length = 2617
Score = 39.7 bits (91), Expect = 0.010
Identities = 42/151 (27%), Positives = 69/151 (45%), Gaps = 10/151 (6%)
Query: 422 LFLCATKFSASAPSSSTDITSFLSSDPSSLPKVPVTSSEAKTQGSGPAVTATKKATTSLE 481
LF C K S A S+ +TS SS PS + P+TS +A T + + + ++ +E
Sbjct: 1962 LFACVPKTSPPATVISS-VTSTCSSLPS-VSSAPITSGQAPTTFLPASTSQAQLSSQKME 2019
Query: 482 SFFQKAAERQKV--KEASLSSLTAPTQAPMSNSPSKPSLPFQTSQSTGTEPFFKQKSLLL 539
SF ++KV ++ +++L P+ S S S + P + P +
Sbjct: 2020 SFSAVPPTKEKVSTQDQPMANLCTPSSTANSCSSSASNTPGAPETHPSSSPTPTSSN--- 2076
Query: 540 KQKQLNNSSVS--SPQQNPW-SNCKALPNSL 567
Q++ SSVS SP P+ SN + P +L
Sbjct: 2077 TQEEAQPSSVSDLSPMSMPFASNSEPAPLTL 2107
Score = 32.0 bits (71), Expect = 2.0
Identities = 42/191 (21%), Positives = 70/191 (36%), Gaps = 19/191 (9%)
Query: 455 PVTSSEAKTQGSGPAVTATKKATTSLESFFQKAAERQKVKEASLSSLTAPTQAPMSNSPS 514
P+T S VT T+ ++ + F + +SS+T+ S+ PS
Sbjct: 1934 PITVSSVVAASQQLCVTNTRTPSSVRKQLFA-CVPKTSPPATVISSVTSTC----SSLPS 1988
Query: 515 KPSLPFQTSQSTGTE-PFFKQKSLLLKQKQLNNSSVS------SPQQNPWSNCKALPNSL 567
S P + Q+ T P ++ L QK + S+V S Q P +N P+S
Sbjct: 1989 VSSAPITSGQAPTTFLPASTSQAQLSSQKMESFSAVPPTKEKVSTQDQPMANL-CTPSST 2047
Query: 568 PTEYPGCVPVCEGVSKLEESSKATPAEMDLAHNSQSMHASSASKSVLEVTQKATP----- 622
G + SS TP + +Q S S + + P
Sbjct: 2048 ANSCSSSASNTPGAPETHPSSSPTPTSSNTQEEAQPSSVSDLSPMSMPFASNSEPAPLTL 2107
Query: 623 -NPSLLAAEDQ 632
+P ++AA++Q
Sbjct: 2108 TSPRMVAADNQ 2118
>gi|26051278 nuclear pore membrane protein 121 [Homo sapiens]
Length = 984
Score = 39.3 bits (90), Expect = 0.013
Identities = 45/190 (23%), Positives = 63/190 (33%), Gaps = 21/190 (11%)
Query: 445 SSDPSSLPKVPVTSSEAKTQGSGPAVTATKKATTSLESFFQKAAERQKVKEASLSSLTAP 504
+S PS PK T S PA A A + F + +K T P
Sbjct: 428 TSAPSPAPKQSFLFGTQNTSPSSPAAPAASSAPPMFKPIFTAPPKSEK------EGPTPP 481
Query: 505 TQAPMSNSPSKPSLPFQTSQSTGT-EPFFKQKSLLLKQKQLNNSSVSSPQQNPWSNCKAL 563
+ + +PS SLP TS + T +P F S P P+
Sbjct: 482 GPSVTATAPSSSSLPTTTSTTAPTFQPVFSSM----------GPPASVPLPAPFFKQTTT 531
Query: 564 PNSLPTE----YPGCVPVCEGVSKLEESSKATPAEMDLAHNSQSMHASSASKSVLEVTQK 619
P + PT + G V+ + +S +T + A SS+S S T
Sbjct: 532 PATAPTTTAPLFTGLASATSAVAPITSASPSTDSASKPAFGFGINSVSSSSVSTTTSTAT 591
Query: 620 ATPNPSLLAA 629
A P L A
Sbjct: 592 AASQPFLFGA 601
Score = 34.3 bits (77), Expect = 0.41
Identities = 51/236 (21%), Positives = 96/236 (40%), Gaps = 37/236 (15%)
Query: 416 SPPLTMLFLCATKFSASAPSSSTDITSFLSSDPSSLPKVPVTSSEAKTQGS-----GPAV 470
S PL F T A+AP+++ + + L+S S++ P+TS+ T + G +
Sbjct: 518 SVPLPAPFFKQTTTPATAPTTTAPLFTGLASATSAV--APITSASPSTDSASKPAFGFGI 575
Query: 471 TATKKATTSLESFFQKAAERQKV---KEASLSSLTAPTQAPMSNSPSKPSLPFQTSQSTG 527
+ ++ S + AA + + +AS +S T P + P+LP T+ +T
Sbjct: 576 NSVSSSSVSTTTSTATAASQPFLFGAPQASAASFT-PAMGSIFQFGKPPALPTTTTVTTF 634
Query: 528 TEPFFKQKSLLLKQKQLNNSSVSSPQQNPWSNCKALPNSLPTEYPGCVPVCEGVSKLEES 587
++ +++V + + ++ ++L T P L S
Sbjct: 635 SQSL--------------HTAVPTATSSSAADFSGFGSTLATS----APATSSQPTLTFS 676
Query: 588 SKATPAEMDLAHNSQSMHASSASKSVLEVTQKATPNPSLLAAEDQVPCEKCGSLVP 643
+ +TP + ++ S++KS L A P P+ AAE Q P +L P
Sbjct: 677 NTSTP--------TFNIPFGSSAKSPLPSYPGANPQPAFGAAEGQPPGAAKPALAP 724
>gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]
Length = 2817
Score = 39.3 bits (90), Expect = 0.013
Identities = 51/196 (26%), Positives = 79/196 (40%), Gaps = 31/196 (15%)
Query: 416 SPPLTMLFLCATKFSASAPSSSTDIT------SFLSSDPSSLPKVPVTSSEAKTQGSGPA 469
S P+ L S SAP ++ + S +S P+S +TSS A S PA
Sbjct: 1782 SAPVPASTLAPVLASTSAPVPASPLAPVSASASVSASVPASTSAAAITSSSAPA--SAPA 1839
Query: 470 VTATKKATTSLESFFQKAAERQKVKEASLSSLTAPTQAPMSNSPSKPSLPFQT---SQST 526
T + ++ S A+ + ++L+S +APT AP ++SP+ P + T S T
Sbjct: 1840 PTPILASVSTPASVTILASASIPILASALASTSAPTPAPAASSPAAPVITAPTIPASAPT 1899
Query: 527 GTEPFFKQKSLLLKQKQLNNSSVSSPQQNPWSNCKALPNSLP-----TEYPGCVPVCEGV 581
+ P L +S S+P P + PN P T+ PV +
Sbjct: 1900 ASVP-------------LAPASASAPAPAP--TPVSAPNPAPPAPAQTQAQTHKPVQNPL 1944
Query: 582 SKLEESSKATPAEMDL 597
+SSK P + L
Sbjct: 1945 QTTSQSSKQPPPSIRL 1960
Score = 36.6 bits (83), Expect = 0.083
Identities = 36/124 (29%), Positives = 55/124 (44%), Gaps = 13/124 (10%)
Query: 407 NTSGIQTEWSPPLTMLFLCATKFSASAPSSSTDITSFLSSDPSSLPKVPVTS--SEAKTQ 464
N+ ++ + SP + AT S+SA ST ++ S +S+P++PV S A
Sbjct: 2259 NSPNVREKGSPVTSTAPPIATGVSSSASGPST--ANYNSFSSASMPQIPVASVTPTASLS 2316
Query: 465 GSGPAVT---ATKKATTSLESFFQKAAERQKVKEASLSSLTAPTQAPMSNSPSKPSLPFQ 521
G+G T +TK TTS KVK L + + P+ + S PSL Q
Sbjct: 2317 GAGTYTTSSLSTKSTTTS------DPPNICKVKPQQLQTSSLPSASHFSQLSCMPSLIAQ 2370
Query: 522 TSQS 525
Q+
Sbjct: 2371 QQQN 2374
>gi|161019170 mucin 5AC [Homo sapiens]
Length = 6207
Score = 38.9 bits (89), Expect = 0.017
Identities = 35/129 (27%), Positives = 55/129 (42%), Gaps = 8/129 (6%)
Query: 408 TSGIQTEWSPP-----LTMLFLCATKFSASAPS---SSTDITSFLSSDPSSLPKVPVTSS 459
TS + T S P LT L AT +A+ P+ SST T+++ ++PS+ V V +
Sbjct: 3702 TSSMSTPSSTPGTTWILTELTTAATTTAATGPTATPSSTPGTTWILTEPSTTATVTVPTG 3761
Query: 460 EAKTQGSGPAVTATKKATTSLESFFQKAAERQKVKEASLSSLTAPTQAPMSNSPSKPSLP 519
T S A T K TS + + R + ++ P + +P+ S+
Sbjct: 3762 STATASSTRATAGTLKVLTSTATTPTVISSRATPSSSPGTATALPALRSTATTPTATSVT 3821
Query: 520 FQTSQSTGT 528
S S GT
Sbjct: 3822 AIPSSSLGT 3830
Score = 30.0 bits (66), Expect = 7.8
Identities = 34/131 (25%), Positives = 53/131 (40%), Gaps = 26/131 (19%)
Query: 408 TSGIQTEWSPP-----LTMLFLCAT---KFSASAPSSSTDITSFLSSDPSSLPKVPVTSS 459
TS T S P LT L AT ++A SST T+++ ++PS+ V V +
Sbjct: 4205 TSSTATPSSTPGTTWILTKLTTTATTTESTGSTATPSSTPGTTWILTEPSTTATVTVPTG 4264
Query: 460 EAKTQGSGPAVTATKKATTSLESFFQKAAERQKVKEASLSSLTAPTQAPMSNSPSKPSLP 519
T S A T +T+ A+ ++T+ P S+ + +LP
Sbjct: 4265 STATASSTQATAGTPHVSTT----------------ATTPTVTSSKATPFSSPGTATALP 4308
Query: 520 FQTSQSTGTEP 530
+ST T P
Sbjct: 4309 --ALRSTATTP 4317
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 38.9 bits (89), Expect = 0.017
Identities = 69/248 (27%), Positives = 90/248 (36%), Gaps = 47/248 (18%)
Query: 430 SASAPSSSTDITSFLSSDPSS--LPKVPVTSSEAKTQG----SGPAVTATKK-------- 475
S S SS+T ++S S PS+ P+ P S+ K +G P VT +K
Sbjct: 239 SRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGP 298
Query: 476 ------ATTSLESFFQKAAERQKVKEASLSSLTAPTQAPMSNSPSKPSLP--FQTSQS-T 526
AT S + Q A SSLT P+ +P PS P QT S
Sbjct: 299 LSSSPLATPSPSAALQSQAPPTLPATPHSSSLTCQLATPLPLAPPSPSAPPSLQTLPSPP 358
Query: 527 GTEPFFKQKSLLLKQKQLNNSSVSSPQQNPWSN-------CKALPNSLPTEYPGCVPVCE 579
T P SL Q +S + SP +P + ALP P + P P
Sbjct: 359 ATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALP---PLQAPPSPPASP 415
Query: 580 GVSKLEESSKATPAEMDLAHNSQSMHASSASKSVL---------EVTQKATP----NPSL 626
+S L S P + H Q+ + S V V+ ATP PSL
Sbjct: 416 PLSPLATPSPQAPNAL-AVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSL 474
Query: 627 LAAEDQVP 634
A QVP
Sbjct: 475 AAPPLQVP 482
>gi|169214154 PREDICTED: hypothetical protein [Homo sapiens]
Length = 737
Score = 38.9 bits (89), Expect = 0.017
Identities = 34/149 (22%), Positives = 65/149 (43%), Gaps = 7/149 (4%)
Query: 395 MSHDAFTVIKNCNTSGIQTEWSPPLTMLFLCATKFSASAPSSSTDITSFLSSDPSSLPKV 454
+SH + N +TS T S T F+ ++ ++++ +S++ +SF +S ++ +
Sbjct: 103 LSHHTLHITSNSSTSSSSTT-SSTSTSSFITSSFTTSTSITSTSSTSSFTTSTATTSTSI 161
Query: 455 PVTSSEAKTQGSGPAVTATKKATTSLESFFQKAAERQKVKEASLSSLTAPTQAPMSNSPS 514
+TS T ++T+T +TTS S S S+ T+ + + S +
Sbjct: 162 SITS----TSSISSSITSTSTSTTSTSS--NSTTSTVTSTSTSTSTSTSTSTSSTFTSTT 215
Query: 515 KPSLPFQTSQSTGTEPFFKQKSLLLKQKQ 543
S ++ ST T + L QKQ
Sbjct: 216 STSTTSTSTTSTSTSATSSIRKLTPHQKQ 244
Score = 33.1 bits (74), Expect = 0.92
Identities = 29/148 (19%), Positives = 59/148 (39%), Gaps = 6/148 (4%)
Query: 416 SPPLTMLFLCATKFSASAPSSSTDITSFLSSDPSSLPKVPVTSSEAKTQGSGPAVTATKK 475
+PP+++L ++++ +SS+ TS S+ ++S T + T+T
Sbjct: 97 APPMSVLSHHTLHITSNSSTSSSSTTSSTSTSSFITSSFTTSTSITSTSSTSSFTTSTAT 156
Query: 476 ATTSLESFFQKAAERQKVKEASLSSLTAPTQAPMSNSPSKPSLPFQTSQSTGTEPFFKQK 535
+TS+ + +S++S + T + SNS + TS ST T
Sbjct: 157 TSTSISITSTSSI------SSSITSTSTSTTSTSSNSTTSTVTSTSTSTSTSTSTSTSST 210
Query: 536 SLLLKQKQLNNSSVSSPQQNPWSNCKAL 563
++S +S + S+ + L
Sbjct: 211 FTSTTSTSTTSTSTTSTSTSATSSIRKL 238
Score = 32.7 bits (73), Expect = 1.2
Identities = 53/268 (19%), Positives = 96/268 (35%), Gaps = 19/268 (7%)
Query: 378 LSSLRRCCALTR---YDAHKMSHDAFTVIKNCNTSGI-----QTEWSPPLTMLF-LCATK 428
LSS CC + D S ++ C + + +PPL + AT
Sbjct: 15 LSSKPSCCEMVTCISLDGRLFSLKMAISVRRCRLRASGGRAGERDTAPPLMLPGPTIATS 74
Query: 429 FSASAPSSSTDITSFLSSDPSSLPKVPV--------TSSEAKTQGSGPAVTATKKATTSL 480
+ P+S+ TS LSS + P + V TS+ + + S + T+T TS
Sbjct: 75 ATRPPPASNEVSTSVLSSTITPAPPMSVLSHHTLHITSNSSTSSSSTTSSTSTSSFITSS 134
Query: 481 ESFFQKAAERQKVKEASLSSLTAPTQAPMSNSPSKPSLPFQTSQSTGTEPFFKQKSLLLK 540
+ + S+ T T ++++ S S TS ST + S +
Sbjct: 135 FTTSTSITSTSSTSSFTTSTATTSTSISITSTSSISSSITSTSTSTTSTSSNSTTSTVTS 194
Query: 541 QKQLNNSSVSSPQQNPWSNCKALPNSLPTEYPGCVPVCEGVSKLEESSKATPAEMDLAHN 600
++S S+ + +++ + + + + KL K A
Sbjct: 195 TSTSTSTSTSTSTSSTFTSTTSTSTTSTSTTSTSTSATSSIRKLTPHQKQCGALASAFLF 254
Query: 601 SQSMHASSASKSVLE--VTQKATPNPSL 626
S+ S+ +K + VT + +P P L
Sbjct: 255 GLSLLVSTGTKGLGRSLVTPRPSPPPPL 282
>gi|169213511 PREDICTED: hypothetical protein [Homo sapiens]
Length = 737
Score = 38.9 bits (89), Expect = 0.017
Identities = 34/149 (22%), Positives = 65/149 (43%), Gaps = 7/149 (4%)
Query: 395 MSHDAFTVIKNCNTSGIQTEWSPPLTMLFLCATKFSASAPSSSTDITSFLSSDPSSLPKV 454
+SH + N +TS T S T F+ ++ ++++ +S++ +SF +S ++ +
Sbjct: 103 LSHHTLHITSNSSTSSSSTT-SSTSTSSFITSSFTTSTSITSTSSTSSFTTSTATTSTSI 161
Query: 455 PVTSSEAKTQGSGPAVTATKKATTSLESFFQKAAERQKVKEASLSSLTAPTQAPMSNSPS 514
+TS T ++T+T +TTS S S S+ T+ + + S +
Sbjct: 162 SITS----TSSISSSITSTSTSTTSTSS--NSTTSTVTSTSTSTSTSTSTSTSSTFTSTT 215
Query: 515 KPSLPFQTSQSTGTEPFFKQKSLLLKQKQ 543
S ++ ST T + L QKQ
Sbjct: 216 STSTTSTSTTSTSTSATSSIRKLTPHQKQ 244
Score = 33.1 bits (74), Expect = 0.92
Identities = 29/148 (19%), Positives = 59/148 (39%), Gaps = 6/148 (4%)
Query: 416 SPPLTMLFLCATKFSASAPSSSTDITSFLSSDPSSLPKVPVTSSEAKTQGSGPAVTATKK 475
+PP+++L ++++ +SS+ TS S+ ++S T + T+T
Sbjct: 97 APPMSVLSHHTLHITSNSSTSSSSTTSSTSTSSFITSSFTTSTSITSTSSTSSFTTSTAT 156
Query: 476 ATTSLESFFQKAAERQKVKEASLSSLTAPTQAPMSNSPSKPSLPFQTSQSTGTEPFFKQK 535
+TS+ + +S++S + T + SNS + TS ST T
Sbjct: 157 TSTSISITSTSSI------SSSITSTSTSTTSTSSNSTTSTVTSTSTSTSTSTSTSTSST 210
Query: 536 SLLLKQKQLNNSSVSSPQQNPWSNCKAL 563
++S +S + S+ + L
Sbjct: 211 FTSTTSTSTTSTSTTSTSTSATSSIRKL 238
Score = 32.7 bits (73), Expect = 1.2
Identities = 53/268 (19%), Positives = 96/268 (35%), Gaps = 19/268 (7%)
Query: 378 LSSLRRCCALTR---YDAHKMSHDAFTVIKNCNTSGI-----QTEWSPPLTMLF-LCATK 428
LSS CC + D S ++ C + + +PPL + AT
Sbjct: 15 LSSKPSCCEMVTCISLDGRLFSLKMAISVRRCRLRASGGRAGERDTAPPLMLPGPTIATS 74
Query: 429 FSASAPSSSTDITSFLSSDPSSLPKVPV--------TSSEAKTQGSGPAVTATKKATTSL 480
+ P+S+ TS LSS + P + V TS+ + + S + T+T TS
Sbjct: 75 ATRPPPASNEVSTSVLSSTITPAPPMSVLSHHTLHITSNSSTSSSSTTSSTSTSSFITSS 134
Query: 481 ESFFQKAAERQKVKEASLSSLTAPTQAPMSNSPSKPSLPFQTSQSTGTEPFFKQKSLLLK 540
+ + S+ T T ++++ S S TS ST + S +
Sbjct: 135 FTTSTSITSTSSTSSFTTSTATTSTSISITSTSSISSSITSTSTSTTSTSSNSTTSTVTS 194
Query: 541 QKQLNNSSVSSPQQNPWSNCKALPNSLPTEYPGCVPVCEGVSKLEESSKATPAEMDLAHN 600
++S S+ + +++ + + + + KL K A
Sbjct: 195 TSTSTSTSTSTSTSSTFTSTTSTSTTSTSTTSTSTSATSSIRKLTPHQKQCGALASAFLF 254
Query: 601 SQSMHASSASKSVLE--VTQKATPNPSL 626
S+ S+ +K + VT + +P P L
Sbjct: 255 GLSLLVSTGTKGLGRSLVTPRPSPPPPL 282
>gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens]
Length = 5765
Score = 38.9 bits (89), Expect = 0.017
Identities = 35/129 (27%), Positives = 55/129 (42%), Gaps = 8/129 (6%)
Query: 408 TSGIQTEWSPP-----LTMLFLCATKFSASAPS---SSTDITSFLSSDPSSLPKVPVTSS 459
TS + T S P LT L AT +A+ P+ SST T+++ ++PS+ V V +
Sbjct: 3122 TSSMSTPSSTPGTTWILTELTTAATTTAATGPTATPSSTPGTTWILTEPSTTATVTVPTG 3181
Query: 460 EAKTQGSGPAVTATKKATTSLESFFQKAAERQKVKEASLSSLTAPTQAPMSNSPSKPSLP 519
T S A T K TS + + R + ++ P + +P+ S+
Sbjct: 3182 STATASSTRATAGTLKVLTSTATTPTVISSRATPSSSPGTATALPALRSTATTPTATSVT 3241
Query: 520 FQTSQSTGT 528
S S GT
Sbjct: 3242 AIPSSSLGT 3250
Score = 30.0 bits (66), Expect = 7.8
Identities = 34/131 (25%), Positives = 53/131 (40%), Gaps = 26/131 (19%)
Query: 408 TSGIQTEWSPP-----LTMLFLCAT---KFSASAPSSSTDITSFLSSDPSSLPKVPVTSS 459
TS T S P LT L AT ++A SST T+++ ++PS+ V V +
Sbjct: 3680 TSSTATPSSTPGTTWILTKLTTTATTTESTGSTATPSSTPGTTWILTEPSTTATVTVPTG 3739
Query: 460 EAKTQGSGPAVTATKKATTSLESFFQKAAERQKVKEASLSSLTAPTQAPMSNSPSKPSLP 519
T S A T +T+ A+ ++T+ P S+ + +LP
Sbjct: 3740 STATASSTQATAGTPHVSTT----------------ATTPTVTSSKATPFSSPGTATALP 3783
Query: 520 FQTSQSTGTEP 530
+ST T P
Sbjct: 3784 --ALRSTATTP 3792
Score = 30.0 bits (66), Expect = 7.8
Identities = 31/122 (25%), Positives = 47/122 (38%), Gaps = 16/122 (13%)
Query: 408 TSGIQTEWSPP-LTMLFLCATKFSASAPSSSTDITSFLSSDPSSLPKVPVTSSEAKTQGS 466
+S QT +PP LT T ++ SST T+ ++ +S P +S T S
Sbjct: 4671 SSSTQTSGTPPSLTTTATTITATGSTTNPSSTPGTTPITPVLTSTATTPAATSSKATSSS 4730
Query: 467 GPAVTATKKATTSLESFFQKAAERQKVKEASLSSLTAPTQAPMSNSPSKPSLPFQTSQST 526
P T TS A+ S+ T+ T P S + ++P QT+
Sbjct: 4731 SPRTATTLPVLTS---------------TATKSTATSFTPIPSSTLWTTWTVPAQTTTPM 4775
Query: 527 GT 528
T
Sbjct: 4776 ST 4777
>gi|161016767 mucin 21 [Homo sapiens]
Length = 566
Score = 38.9 bits (89), Expect = 0.017
Identities = 57/265 (21%), Positives = 96/265 (36%), Gaps = 38/265 (14%)
Query: 408 TSGIQT----EWSPPLTMLFLCATKFSASAPSSSTDITSFLSSDPSSLPKV--------- 454
+SGI T E+S + + + S++ S ++ T+ SS PSS
Sbjct: 84 SSGISTATNSEFSTVSSGISIATNSESSTTSSGASTATNSESSTPSSGASTATNSDSSTT 143
Query: 455 ------------PVTSSEAKTQGSGPAVTATKKATTSLESFFQKAAERQKVKEASLSSLT 502
TSSEA T + + T + A+T+ S + R S SS T
Sbjct: 144 SSGASTATNSDSSTTSSEASTATNSESSTTSSGASTATNSESSTVSSRASTATNSESSTT 203
Query: 503 APTQAPMSNSPSKPSLPFQTSQSTGTEPFFKQKSLLLKQKQLNNSSVSSPQQNPWSNCKA 562
+ + +NS S+ TS GT + + NS S+P + +
Sbjct: 204 SSGASTATNSESR-----TTSNGAGTATNSESSTTSSGASTATNSESSTPSSGAGTATNS 258
Query: 563 LPNSLPTEYPGCV------PVCEGVSKLEESSKATPAE-MDLAHNSQSMHASSASKSVLE 615
+S + G V G+S + S +TP+ + A NS+S SS + +
Sbjct: 259 -ESSTTSSGAGTATNSESSTVSSGISTVTNSESSTPSSGANTATNSESSTTSSGANTATN 317
Query: 616 VTQKATPNPSLLAAEDQVPCEKCGS 640
T + + A + G+
Sbjct: 318 SDSSTTSSGASTATNSESSTTSSGA 342
>gi|197276600 microtubule-associated protein 4 isoform 4 [Homo
sapiens]
Length = 1135
Score = 38.5 bits (88), Expect = 0.022
Identities = 58/256 (22%), Positives = 102/256 (39%), Gaps = 40/256 (15%)
Query: 406 CNTSGIQTEWSPPLTMLFLCATKFSASAPSSSTDITSFLSSDPSSLPKVPVT-------S 458
CNT+ + WS + ++P S + ++ ++P VP+ +
Sbjct: 181 CNTAVVPQGWSVE-----------ALNSPHSESFVSPEAVAEPPQPTAVPLELAKEIEMA 229
Query: 459 SEAKTQGSGPAVTATKKATTSLESFFQKAAERQKVKEASLSSLTAPTQAPMSNSPSKPSL 518
SE + + K T S K E K+ +L++ T A SP+K
Sbjct: 230 SEERPPAQALEIMMGLKTTDMAPS---KETEMALAKDMALATKTEVALAKDMESPTK--- 283
Query: 519 PFQTSQSTGTEPFFKQKSLLLKQKQLNNSS-------VSSPQQNPWSNCKALPNSLPTEY 571
+ + +P + L+K +L V P + S+ K + LPTE
Sbjct: 284 -LDVTLAKDMQPSMESDMALVKDMELPTEKEVALVKDVRWPTETDVSSAKNVV--LPTET 340
Query: 572 PGCVPVCEGVSKLEESSKATPAEMDLAHNSQSMHASSASKSVLEVTQKATPNPSLLAAED 631
V + V+ L+E+ +A+P +MDLA S+ M +K + T++A+P LA
Sbjct: 341 E--VAPAKDVTLLKETERASPIKMDLA-PSKDMGPPKENK---KETERASPIKMDLAPSK 394
Query: 632 QVPCEKCGSLVPVWDM 647
+ K +VP D+
Sbjct: 395 DMGPPKENKIVPAKDL 410
>gi|47519639 microtubule-associated protein 4 isoform 1 [Homo
sapiens]
Length = 1152
Score = 38.5 bits (88), Expect = 0.022
Identities = 58/256 (22%), Positives = 102/256 (39%), Gaps = 40/256 (15%)
Query: 406 CNTSGIQTEWSPPLTMLFLCATKFSASAPSSSTDITSFLSSDPSSLPKVPVT-------S 458
CNT+ + WS + ++P S + ++ ++P VP+ +
Sbjct: 181 CNTAVVPQGWSVE-----------ALNSPHSESFVSPEAVAEPPQPTAVPLELAKEIEMA 229
Query: 459 SEAKTQGSGPAVTATKKATTSLESFFQKAAERQKVKEASLSSLTAPTQAPMSNSPSKPSL 518
SE + + K T S K E K+ +L++ T A SP+K
Sbjct: 230 SEERPPAQALEIMMGLKTTDMAPS---KETEMALAKDMALATKTEVALAKDMESPTK--- 283
Query: 519 PFQTSQSTGTEPFFKQKSLLLKQKQLNNSS-------VSSPQQNPWSNCKALPNSLPTEY 571
+ + +P + L+K +L V P + S+ K + LPTE
Sbjct: 284 -LDVTLAKDMQPSMESDMALVKDMELPTEKEVALVKDVRWPTETDVSSAKNVV--LPTET 340
Query: 572 PGCVPVCEGVSKLEESSKATPAEMDLAHNSQSMHASSASKSVLEVTQKATPNPSLLAAED 631
V + V+ L+E+ +A+P +MDLA S+ M +K + T++A+P LA
Sbjct: 341 E--VAPAKDVTLLKETERASPIKMDLA-PSKDMGPPKENK---KETERASPIKMDLAPSK 394
Query: 632 QVPCEKCGSLVPVWDM 647
+ K +VP D+
Sbjct: 395 DMGPPKENKIVPAKDL 410
>gi|110431354 transducer of regulated CREB protein 3 isoform a [Homo
sapiens]
Length = 619
Score = 38.5 bits (88), Expect = 0.022
Identities = 46/189 (24%), Positives = 79/189 (41%), Gaps = 32/189 (16%)
Query: 403 IKNCNTSGIQTEWSPPLTMLFLC---------ATKFSASAPSSSTDITSFLSSDPSSLPK 453
+ N SG PP++ L L + + S+++P + + +SSD S L
Sbjct: 374 LSTTNLSGPSRRRQPPVSPLTLSPGPEAHQGFSRQLSSTSPLAPYPTSQMVSSDRSQLSF 433
Query: 454 VPVTSSEAKTQGSGPAVTATKKATTSLESFFQKAAERQKVKEASLSSLTAPTQAPMSNSP 513
+P +EA+ Q S P + T Q ++ + EA A + P S+
Sbjct: 434 LP---TEAQAQVSPPPPYPAPQELT------QPLLQQPRAPEAPAQQPQAASSLPQSDFQ 484
Query: 514 SKPSLPFQTS----------QSTGTEPFFKQKSLLLKQ--KQLNNSSVSSPQQNPWSNCK 561
P+ + QS P F Q+ L++Q ++L +S P +P+SNC
Sbjct: 485 LLPAQGSSLTNFFPDVGFDQQSMRPGPAFPQQVPLVQQGSRELQDSFHLRP--SPYSNCG 542
Query: 562 ALPNSLPTE 570
+LPN++ E
Sbjct: 543 SLPNTILPE 551
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 38.5 bits (88), Expect = 0.022
Identities = 49/210 (23%), Positives = 78/210 (37%), Gaps = 12/210 (5%)
Query: 430 SASAP---SSSTDITSFLSSDPSSLPKVPVTSSEAKTQGSGPAVTATKKATTSLESFFQK 486
S S+P SST S S PKV S + SG + + + T+ +
Sbjct: 892 SGSSPPRVKSSTPPRQSPSRSSSPQPKVKAIISPRQRSHSGSSSPSPSRVTSRTTPRRSR 951
Query: 487 AAERQKVKEASLSSLTAPTQAPMSNSPSKPSLPFQTSQSTGTEPFFKQKSLLLKQKQLNN 546
+ E+ L + + + ++ KP P + S S P+ K K+ L+
Sbjct: 952 SVSPCSNVESRLLPRYSHSGSSSPDTKVKPETPPRQSHSGSISPYPKVKAQTPPGPSLSG 1011
Query: 547 SSVSSPQQNPWSNCKALPNSLPTEYPGCVPVCEGV--SKLEESSKATPAEMDLAHNSQSM 604
S PQ+ +SL PG + +C GV S S + + L SQ+
Sbjct: 1012 SKSPCPQEKS-------KDSLVQSCPGSLSLCAGVKSSTPPGESYFGVSSLQLKGQSQTS 1064
Query: 605 HASSASKSVLEVTQKATPNPSLLAAEDQVP 634
+ S EV Q + +PSL + P
Sbjct: 1065 PDHRSDTSSPEVRQSHSESPSLQSKSQTSP 1094
Score = 32.0 bits (71), Expect = 2.0
Identities = 50/211 (23%), Positives = 80/211 (37%), Gaps = 25/211 (11%)
Query: 418 PLTMLFLCATKFSASAPSSSTDITSFLSSDPSSLPKVPVTSSEAKTQGSGPAV---TATK 474
P + L K S+ SSS+ +S SS SS SS + ++GS V A K
Sbjct: 2518 PSALAALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALK 2577
Query: 475 KATTSLESFFQKAAERQKVKEASLSSLTAPTQAPMSNSPSKPSLPFQTSQSTGTEPFFKQ 534
+ + A ++ V+E T + S+S S S +S S+ +
Sbjct: 2578 RVPS------PTPAPKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSS 2631
Query: 535 KSLLLKQKQLNNSSVSSPQQNPWSNCKALPNSLPTEYPGCVPVCEGVSKLEESSKATPAE 594
S ++SS SSP S K P +LP P E S++
Sbjct: 2632 SSSSSSSSSSSSSSSSSP-----SPAKPGPQALPKPASPKKP-----PPGERRSRSPRKP 2681
Query: 595 MDLAHNSQSMHASSASKSVLEVTQKATPNPS 625
+D +S+S+ S + ++ +P PS
Sbjct: 2682 IDSLRDSRSLSYSPVER------RRPSPQPS 2706
>gi|110431352 transducer of regulated CREB protein 3 isoform b [Homo
sapiens]
Length = 618
Score = 38.1 bits (87), Expect = 0.029
Identities = 45/186 (24%), Positives = 78/186 (41%), Gaps = 32/186 (17%)
Query: 403 IKNCNTSGIQTEWSPPLTMLFLC---------ATKFSASAPSSSTDITSFLSSDPSSLPK 453
+ N SG PP++ L L + + S+++P + + +SSD S L
Sbjct: 374 LSTTNLSGPSRRRQPPVSPLTLSPGPEAHQGFSRQLSSTSPLAPYPTSQMVSSDRSQLSF 433
Query: 454 VPVTSSEAKTQGSGPAVTATKKATTSLESFFQKAAERQKVKEASLSSLTAPTQAPMSNSP 513
+P +EA+ Q S P + T Q ++ + EA A + P S+
Sbjct: 434 LP---TEAQAQVSPPPPYPAPQELT------QPLLQQPRAPEAPAQQPQAASSLPQSDFQ 484
Query: 514 SKPSLPFQTS----------QSTGTEPFFKQKSLLLKQ--KQLNNSSVSSPQQNPWSNCK 561
P+ + QS P F Q+ L++Q ++L +S P +P+SNC
Sbjct: 485 LLPAQGSSLTNFFPDVGFDQQSMRPGPAFPQQVPLVQQGSRELQDSFHLRP--SPYSNCG 542
Query: 562 ALPNSL 567
+LPN++
Sbjct: 543 SLPNTI 548
>gi|169211436 PREDICTED: hypothetical protein [Homo sapiens]
Length = 280
Score = 37.7 bits (86), Expect = 0.037
Identities = 47/193 (24%), Positives = 72/193 (37%), Gaps = 27/193 (13%)
Query: 406 CNTSGIQTEWSPPLTMLF---LCATKFSASAPSSSTDIT--SFLSSDPSSLPKVPVTSSE 460
C+T + +P LT L + PSS+ +T S + PSS P + +S+
Sbjct: 81 CSTPTLTPSNTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTP 140
Query: 461 AKTQGSGPAVTATKKATTSLESFFQKAAERQKVKEASLSSLTAPTQAPMSNSPSKPSL-P 519
T+ S P +T + T + S +L+ + PT P S PS P
Sbjct: 141 TLTRSSTPTLTPSSTPTLTPSS------------TPTLTPSSTPTLTPSSTPTLTPSSRP 188
Query: 520 FQTSQSTGTEPFFKQKSLLLKQKQLNNSSVSSPQQNPWSNCKALPNSLPTEYPGCVPVCE 579
T ST T L + S+P P + +P+S PT P P
Sbjct: 189 ILTRSSTPT---------LTPSSTPTLTPSSTPTLTPSNTPTLIPSSTPTLTPSSTPTLT 239
Query: 580 GVSKLEESSKATP 592
S+ + +TP
Sbjct: 240 PSSRPTLTRSSTP 252
Score = 35.4 bits (80), Expect = 0.18
Identities = 43/198 (21%), Positives = 70/198 (35%), Gaps = 22/198 (11%)
Query: 434 PSSSTDITSFLSSDPSSLPKVPVTSSEAKTQGSGPAVTATKKATTSLESFFQKAAERQKV 493
PSS+ +T PSS P + +S+ T S P +T + T + S
Sbjct: 96 PSSTPTLT------PSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSS----------- 138
Query: 494 KEASLSSLTAPTQAPMSNSPSKPS-LPFQTSQSTGTEPFFKQKSLLLKQKQL---NNSSV 549
+L+ + PT P S PS P T ST T +L + + +++
Sbjct: 139 -TPTLTRSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPT 197
Query: 550 SSPQQNPWSNCKALPNSLPTEYPGCVPVCEGVSKLEESSKATPAEMDLAHNSQSMHASSA 609
+P P + P P+ P +P + TP+ S + + +
Sbjct: 198 LTPSSTPTLTPSSTPTLTPSNTPTLIPSSTPTLTPSSTPTLTPSSRPTLTRSSTPTLTPS 257
Query: 610 SKSVLEVTQKATPNPSLL 627
S L + T PS L
Sbjct: 258 STPTLTPSSTPTLTPSSL 275
>gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo
sapiens]
Length = 699
Score = 37.7 bits (86), Expect = 0.037
Identities = 50/208 (24%), Positives = 78/208 (37%), Gaps = 27/208 (12%)
Query: 430 SASAPSSSTDITSFLSSDPSSLPKVPVTSSEAKTQGSGPAVTATKKATTSLESFFQKAAE 489
+ A SSS+ +S SSD S K T + + A K ATT
Sbjct: 211 NGKAASSSSSSSSSSSSDDSEEEKAAATPKKTVPKKQVVAKAPVKAATT--------PTR 262
Query: 490 RQKVKEASLSSLTAPTQAPMSNSPS------KPSLPFQTSQSTGTEPFFKQKSLLLKQKQ 543
+ E S S + PM N P PS P +S GT+P K + KQ+
Sbjct: 263 KSSSSEDSSSDEEEEQKKPMKNKPGPYSSVPPPSAP-PPKKSLGTQP---PKKAVEKQQP 318
Query: 544 LNNSSVSSPQQNPWSN------CKALPNSLPTEYPGCVPVCEGVSKLEESSKATPAEMDL 597
+ +S SS + + S KA+ + T+ P P + +SS + +E D
Sbjct: 319 VESSEDSSDESDSSSEEEKKPPTKAVVSKATTKPP---PAKKAAESSSDSSDSDSSEDDE 375
Query: 598 AHNSQSMHASSASKSVLEVTQKATPNPS 625
A + + ++S T+ P+
Sbjct: 376 APSKPAGTTKNSSNKPAVTTKSPAVKPA 403
>gi|32698936 B-cell CLL/lymphoma 9-like [Homo sapiens]
Length = 1499
Score = 37.7 bits (86), Expect = 0.037
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 12/107 (11%)
Query: 418 PLTMLFLCATKFS--ASAPSSSTDITSFLSSDPSSLPKVPVTSSEAKTQGSGPAVTATKK 475
PL+++ +K++ +S P I + +SD LP P+ QGSGP ++ ++
Sbjct: 1083 PLSLMMTQMSKYAMPSSTPLYHNAIKTIATSDDELLPDRPLLPPPPPPQGSGPGISNSQP 1142
Query: 476 ATTSLESFFQKAAERQKVKEASLSSLTAPTQAPMSNSPSKPSLPFQT 522
+ L S AA+ S + P Q P+S+ P LP T
Sbjct: 1143 SQMHLNS---AAAQ-------SPMGMNLPGQQPLSHEPPPAMLPSPT 1179
>gi|72256200 B-cell CLL/lymphoma 9 [Homo sapiens]
Length = 1426
Score = 37.4 bits (85), Expect = 0.049
Identities = 51/182 (28%), Positives = 70/182 (38%), Gaps = 22/182 (12%)
Query: 440 ITSFLSSDPSSLPKVPVTSSEAKTQGSGPAVTATKKATTSLESFFQKAAERQKVKEASLS 499
+ S + PS K P T S+ +GPA A+ K+ L S AA +K SL
Sbjct: 871 VQSPMLGSPSGNLKSPQTPSQLAGMLAGPAAAASIKSPPVLGS---AAASPVHLKSPSL- 926
Query: 500 SLTAPTQAPMSNSPSKPSLPFQTSQSTGTEPFFKQKSLLLKQKQLNNSSVSSPQQNPWSN 559
P +P S KP L QS G P K + L N P S
Sbjct: 927 ----PAPSPGWTSSPKPPL-----QSPGIPPNHKAPLTMASPAMLGNVESGGPPPPTASQ 977
Query: 560 CKA--LPNSLPTEYPGCVPVCEGVSK------LEESSK-ATPAEMDLAHNSQSMHASSAS 610
+ +P SLP+ P +P +S+ + SK A P+ L H++ ASS
Sbjct: 978 PASVNIPGSLPSSTPYTMPPEPTLSQNPLSIMMSRMSKFAMPSSTPLYHDAIKTVASSDD 1037
Query: 611 KS 612
S
Sbjct: 1038 DS 1039
>gi|239758038 PREDICTED: mucin 3A, cell surface associated, partial
[Homo sapiens]
Length = 909
Score = 37.0 bits (84), Expect = 0.064
Identities = 49/230 (21%), Positives = 86/230 (37%), Gaps = 13/230 (5%)
Query: 396 SHDAFTVIKNCNTSGIQTEWSPPLTMLFLCATKFSASAPSSSTDITSFLS---SDPSSLP 452
SH + + +T+ + +P T L S S PS +T IT+ + S PS
Sbjct: 42 SHSTPSFTSSISTTETTSHSTPSFTSLITITETTSHSTPSYTTSITTTETPSHSTPSYTT 101
Query: 453 KVPVTSSEAKTQGSGPAVTATKKATTSLESFFQKAAERQKVKEASLSSLTAPTQAPMSNS 512
+ T + + + S + T + T+ F + + S S T+ + S
Sbjct: 102 SITTTETPSHSTPSFTSSITTTETTSHSTPSFTSSIRTTETTSYSTPSFTSSNTITETTS 161
Query: 513 PSKPSLPFQTSQSTGTEPFFKQKSLLLKQKQLNNSSVSSPQ-QNPWSNCKALPNSLPTEY 571
S PS + TS +T P S +S S+P + + + +S P+
Sbjct: 162 HSTPS--YITSITTTETPSSSTPSFSSSITTTETTSHSTPGFTSSITTTETTSHSTPS-- 217
Query: 572 PGCVPVCEGVSKLEESSKATPAEMDLAHNSQSMHASSASKSVLEVTQKAT 621
++ E +S TP+ S++ S+ S + L T K T
Sbjct: 218 -----FTSSITTTETTSHDTPSFTSSITTSETPSHSTPSSTSLITTTKTT 262
Score = 34.7 bits (78), Expect = 0.32
Identities = 34/143 (23%), Positives = 56/143 (39%), Gaps = 6/143 (4%)
Query: 396 SHDAFTVIKNCNTSGIQTEWSPPLTMLFLCATKFSASAPSSSTDITSF---LSSDPSSLP 452
SH + + T+ + +P T S S PS T IT+ SS PS
Sbjct: 127 SHSTPSFTSSIRTTETTSYSTPSFTSSNTITETTSHSTPSYITSITTTETPSSSTPSFSS 186
Query: 453 KVPVTSSEA-KTQGSGPAVTATKKATTSLESFFQKAAERQKVKE--ASLSSLTAPTQAPM 509
+ T + + T G ++T T+ + S SF + S +S ++ P
Sbjct: 187 SITTTETTSHSTPGFTSSITTTETTSHSTPSFTSSITTTETTSHDTPSFTSSITTSETPS 246
Query: 510 SNSPSKPSLPFQTSQSTGTEPFF 532
++PS SL T ++ + P F
Sbjct: 247 HSTPSSTSLITTTKTTSHSTPSF 269
Score = 30.0 bits (66), Expect = 7.8
Identities = 34/135 (25%), Positives = 57/135 (42%), Gaps = 20/135 (14%)
Query: 403 IKNCNTSGIQTEWSPPLTMLFLCATK------FSASAPSSSTDITSF------------L 444
I + ++S +QT S P L +T F+ + S++ +TSF +
Sbjct: 520 IPSTHSSTLQTTPSTPSLQTSLTSTSEFTTESFTRGSTSTNAILTSFSTIIWSSTPTIIM 579
Query: 445 SSDPSSLPKVPVTSSEAKTQGSGPAVTATKKATTSLESFFQKAAERQKVKEASLSS--LT 502
SS PSS PV S+ + S P + +T+ ++ + F + +S SS T
Sbjct: 580 SSSPSSASITPVFSTTIHSVPSSPYIFSTENVGSASITGFPSLSSSATTSTSSTSSSLTT 639
Query: 503 APTQAPMSNSPSKPS 517
A T+ + S PS
Sbjct: 640 ALTEITPFSYISLPS 654
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.127 0.370
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,869,804
Number of Sequences: 37866
Number of extensions: 1190273
Number of successful extensions: 4208
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 162
Number of HSP's that attempted gapping in prelim test: 3816
Number of HSP's gapped (non-prelim): 482
length of query: 713
length of database: 18,247,518
effective HSP length: 109
effective length of query: 604
effective length of database: 14,120,124
effective search space: 8528554896
effective search space used: 8528554896
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.