Guide to the Human Genome
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Name: SLC35D3 Sequence: fasta or formatted (416aa) NCBI GI: 56912198
Description:

solute carrier family 35, member D3

Referenced in:

Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.6         40           2
 C cysteine            2.4         10           1
 D aspartate           2.4         10           1
 E glutamate           5.0         21           2
 F phenylalanine       3.8         16           1
 G glycine             9.4         39           2
 H histidine           1.2          5           1
 I isoleucine          5.3         22           2
 K lysine              2.6         11           2
 L leucine            13.0         54           2
 M methionine          2.2          9           1
 N asparagine          1.9          8           1
 P proline             4.8         20           2
 Q glutamine           2.9         12           1
 R arginine            4.8         20           2
 S serine              8.9         37           2
 T threonine           6.2         26           2
 V valine              9.9         41           3
 W tryptophan          1.0          4           1
 Y tyrosine            2.6         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 35, member D3 
SLC35D1               0.081   solute carrier family 35 (UDP-glucuronic acid/UDP-N-...
SLC35D2               0.067   solute carrier family 35, member D2 
C18orf45              0.016   hypothetical protein LOC85019 
LOC100287396          0.013   PREDICTED: hypothetical protein XP_002343076 
LOC100289996          0.011   PREDICTED: hypothetical protein XP_002347212 
LOC100290274          0.010   PREDICTED: hypothetical protein XP_002346984 
LOC100288645          0.010   PREDICTED: hypothetical protein XP_002342846 
LOC100129531          0.009   PREDICTED: hypothetical protein 
LOC100129531          0.009   PREDICTED: hypothetical protein 
RIN1                  0.009   ras inhibitor RIN1 
SEMA6C                0.009   semaphorin Y 
DARC                  0.009   Duffy blood group antigen isoform b 
DARC                  0.009   Duffy blood group antigen isoform a 
SLC35B1               0.009   solute carrier family 35, member B1 
PANK2                 0.009   pantothenate kinase 2 isoform 1 preproprotein 
SFRS14                0.008   splicing factor, arginine/serine-rich 14 
SFRS14                0.008   splicing factor, arginine/serine-rich 14 
PRB1                  0.008   proline-rich protein BstNI subfamily 1 isoform 2 pre...
PELP1                 0.008   proline, glutamic acid and leucine rich protein 1 [...
ONECUT2               0.008   one cut domain, family member 2 
PRB1                  0.008   proline-rich protein BstNI subfamily 1 isoform 1 pre...
MUC12                 0.006   PREDICTED: mucin 12 
CSF1                  0.006   colony stimulating factor 1 isoform a precursor [Hom...
CSF1                  0.006   colony stimulating factor 1 isoform a precursor [Hom...
BAT2                  0.006   HLA-B associated transcript-2 
RPGR                  0.006   retinitis pigmentosa GTPase regulator isoform C [Hom...
C6orf174              0.006   hypothetical protein LOC387104 
LOC651986             0.006   PREDICTED: similar to forkhead box L2 
LOC100288524          0.006   PREDICTED: hypothetical protein XP_002342748 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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