Guide to the Human Genome
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Name: PANK2 Sequence: fasta or formatted (570aa) NCBI GI: 85838513
Description:

pantothenate kinase 2 isoform 1 preproprotein

Referenced in:

Vitamin Pathways, Coenzymes, and 1-Carbon Metabolism

Other entries for this name:
alt prot [279aa] pantothenate kinase 2 isoform 2
alt prot [279aa] pantothenate kinase 2 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.4         42           2
 C cysteine            1.9         11           2
 D aspartate           4.4         25           1
 E glutamate           6.0         34           6
 F phenylalanine       4.4         25           2
 G glycine            10.7         61           3
 H histidine           1.8         10           1
 I isoleucine          3.9         22           1
 K lysine              4.4         25           2
 L leucine            11.6         66           3
 M methionine          1.8         10           2
 N asparagine          3.3         19           2
 P proline             5.4         31           2
 Q glutamine           1.9         11           1
 R arginine            8.9         51           3
 S serine              8.2         47           2
 T threonine           5.3         30           2
 V valine              4.7         27           2
 W tryptophan          1.2          7           1
 Y tyrosine            2.8         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   pantothenate kinase 2 isoform 1 preproprotein 
PANK1                 0.539   pantothenate kinase 1 isoform alpha 
PANK3                 0.535   pantothenate kinase 3 
PANK1                 0.529   pantothenate kinase 1 isoform beta 
PANK2                 0.479   pantothenate kinase 2 isoform 2 
PANK2                 0.479   pantothenate kinase 2 isoform 2 
PANK1                 0.347   pantothenate kinase 1 isoform gamma 
PANK4                 0.162   pantothenate kinase 4 
SRRM2                 0.013   splicing coactivator subunit SRm300 
LOC100128703          0.012   PREDICTED: hypothetical protein 
LOC100292407          0.012   PREDICTED: hypothetical protein 
LOC100130882          0.012   PREDICTED: hypothetical protein 
LOC100130882          0.012   PREDICTED: hypothetical protein 
LOC100130882          0.012   PREDICTED: hypothetical protein 
LOC646509             0.012   PREDICTED: hypothetical protein 
LOC338758             0.011   PREDICTED: hypothetical protein 
LOC338758             0.011   PREDICTED: hypothetical protein 
LOC338758             0.011   PREDICTED: hypothetical protein 
LOC100290372          0.011   PREDICTED: hypothetical protein XP_002346788 
LOC100292397          0.010   PREDICTED: hypothetical protein 
LOC100128703          0.010   PREDICTED: hypothetical protein LOC100128703 
LOC100129500          0.010   PREDICTED: hypothetical protein isoform 1 
LOC100129500          0.010   PREDICTED: hypothetical protein isoform 2 
LOC100129500          0.010   PREDICTED: hypothetical protein 
RP1L1                 0.010   retinitis pigmentosa 1-like 1 
TSGA10IP              0.010   testis specific, 10 interacting protein 
GPR37                 0.009   G protein-coupled receptor 37 
LOC100288606          0.009   PREDICTED: hypothetical protein XP_002342652 
SCAF1                 0.009   SR-related CTD-associated factor 1 
C6orf132              0.008   PREDICTED: chromosome 6 open reading frame 132 [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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