Guide to the Human Genome
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Name: SFRS14 Sequence: fasta or formatted (1082aa) NCBI GI: 224282119
Description:

splicing factor, arginine/serine-rich 14

Referenced in:

RNA-binding Proteins
Capping and Splicing

Other entries for this name:
alt mRNA [1082aa] splicing factor, arginine/serine-rich 14
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         77           2
 C cysteine            1.5         16           1
 D aspartate           6.7         73           2
 E glutamate           7.5         81           3
 F phenylalanine       4.3         47           2
 G glycine             7.3         79           3
 H histidine           2.0         22           2
 I isoleucine          3.6         39           2
 K lysine              7.7         83           4
 L leucine             9.2        100           2
 M methionine          2.3         25           2
 N asparagine          2.3         25           1
 P proline             6.9         75           3
 Q glutamine           4.6         50           2
 R arginine            6.4         69           2
 S serine              9.0         97           2
 T threonine           4.6         50           2
 V valine              4.3         47           2
 W tryptophan          0.9         10           1
 Y tyrosine            1.6         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   splicing factor, arginine/serine-rich 14 
SFRS14                1.000   splicing factor, arginine/serine-rich 14 
SF4                   0.026   splicing factor 4 
NKRF                  0.013   transcription factor NRF 
RBM10                 0.013   RNA binding motif protein 10 isoform 1 
RBM10                 0.013   RNA binding motif protein 10 isoform 2 
RBM5                  0.012   RNA binding motif protein 5 
GPATCH2               0.012   G patch domain containing 2 
AGGF1                 0.011   angiogenic factor VG5Q 
CUX1                  0.010   cut-like homeobox 1 isoform a 
CCDC75                0.009   coiled-coil domain containing 75 
IRX3                  0.009   iroquois homeobox 3 
ANP32A                0.008   acidic (leucine-rich) nuclear phosphoprotein 32 famil...
SON                   0.008   SON DNA-binding protein isoform F 
AAK1                  0.008   AP2 associated kinase 1 
AEBP2                 0.008   AE binding protein 2 isoform b 
AEBP2                 0.008   AE binding protein 2 isoform a 
SETD1A                0.007   SET domain containing 1A 
SALL2                 0.007   sal-like 2 
MINK1                 0.007   misshapen/NIK-related kinase isoform 1 
KIAA1429              0.007   hypothetical protein LOC25962 isoform 1 
KIAA1429              0.007   hypothetical protein LOC25962 isoform 2 
CHERP                 0.007   calcium homeostasis endoplasmic reticulum protein [...
PINX1                 0.007   PIN2-interacting protein 1 
TFIP11                0.007   tuftelin interacting protein 11 
TFIP11                0.007   tuftelin interacting protein 11 
MACROD2               0.007   MACRO domain containing 2 isoform 2 
SF3A1                 0.007   splicing factor 3a, subunit 1, 120kDa isoform 2 [Hom...
SF3A1                 0.007   splicing factor 3a, subunit 1, 120kDa isoform 1 [Homo...
MACROD2               0.007   MACRO domain containing 2 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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