LOC100129531 8303

Name: LOC100129531	Sequence: fasta or formatted (145aa)		NCBI GI: 169202578
Description: PREDICTED: hypothetical protein		Not currently referenced in the text
Other entries for this name: alt mRNA {145aa} PREDICTED: hypothetical protein
Composition: Amino acid Percentage Count Longest homopolymer A alanine 12.4 18 3 C cysteine 0.7 1 1 D aspartate 6.2 9 2 E glutamate 7.6 11 2 F phenylalanine 2.1 3 1 G glycine 13.1 19 4 H histidine 1.4 2 1 I isoleucine 0.7 1 1 K lysine 6.9 10 2 L leucine 4.8 7 2 M methionine 0.7 1 1 N asparagine 0.7 1 1 P proline 12.4 18 2 Q glutamine 3.4 5 1 R arginine 9.7 14 2 S serine 8.3 12 2 T threonine 4.8 7 1 V valine 2.8 4 1 W tryptophan 1.4 2 1 Y tyrosine 0.0 0 0			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein LOC100129531 1.000 PREDICTED: hypothetical protein COL2A1 0.054 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.054 collagen, type II, alpha 1 isoform 2 precursor [Hom... LOC100128398 0.051 PREDICTED: hypothetical protein LOC100128392 0.051 PREDICTED: hypothetical protein LOC100128398 0.051 PREDICTED: hypothetical protein LOC100128392 0.051 PREDICTED: hypothetical protein LOC100128398 0.051 PREDICTED: hypothetical protein LOC100128392 0.051 PREDICTED: hypothetical protein C2orf55 0.051 hypothetical protein LOC343990 MYPOP 0.051 Myb protein P42POP CABIN1 0.051 calcineurin binding protein 1 KIF26B 0.051 kinesin family member 26B LRCH4 0.047 leucine-rich repeats and calponin homology (CH) doma... LMTK3 0.043 lemur tyrosine kinase 3 C14orf80 0.040 hypothetical protein LOC283643 isoform 4 C14orf80 0.040 hypothetical protein LOC283643 isoform 2 C14orf80 0.040 hypothetical protein LOC283643 isoform 1 COL4A1 0.040 alpha 1 type IV collagen preproprotein GNAS 0.040 GNAS complex locus XLas CDX1 0.040 caudal type homeobox 1 RPGR 0.036 retinitis pigmentosa GTPase regulator isoform C [Hom... SFPQ 0.036 splicing factor proline/glutamine rich (polypyrimidin... ZC3H6 0.036 zinc finger CCCH-type domain containing 6 ZNF541 0.036 zinc finger protein 541 TBC1D10B 0.036 TBC1 domain family, member 10B LOC730130 0.036 hypothetical protein LOC730130 ATXN2 0.032 ataxin 2 RP1L1 0.032 retinitis pigmentosa 1-like 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.