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Search of human proteins with 56549649
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|56549649 nuclear factor I/X (CCAAT-binding transcription
factor) [Homo sapiens]
(441 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|56549649 nuclear factor I/X (CCAAT-binding transcription fact... 909 0.0
gi|224465184 nuclear factor I/A isoform 4 [Homo sapiens] 602 e-172
gi|30840980 nuclear factor I/A isoform 2 [Homo sapiens] 602 e-172
gi|197927284 nuclear factor I/A isoform 1 [Homo sapiens] 602 e-172
gi|224465182 nuclear factor I/A isoform 3 [Homo sapiens] 585 e-167
gi|45505149 nuclear factor I/C isoform 1 [Homo sapiens] 473 e-133
gi|93004092 nuclear factor I/B [Homo sapiens] 467 e-131
gi|45505151 nuclear factor I/C isoform 2 [Homo sapiens] 460 e-129
gi|55750053 atrophin-1 [Homo sapiens] 38 0.021
gi|55750041 atrophin-1 [Homo sapiens] 38 0.021
gi|61676188 HECT, UBA and WWE domain containing 1 [Homo sapiens] 35 0.14
gi|67514036 SH3-domain kinase binding protein 1 isoform b [Homo ... 35 0.18
gi|13994242 SH3-domain kinase binding protein 1 isoform a [Homo ... 35 0.18
gi|58530845 zyxin [Homo sapiens] 35 0.18
gi|4508047 zyxin [Homo sapiens] 35 0.18
gi|88501738 TRIO and F-actin binding protein isoform 6 [Homo sap... 35 0.18
gi|169202626 PREDICTED: similar to mucin 5, partial [Homo sapiens] 34 0.30
gi|91982772 mucin 17 [Homo sapiens] 33 0.52
gi|239742114 PREDICTED: similar to hCG2023245 [Homo sapiens] 32 0.88
gi|171543895 ataxin 2 [Homo sapiens] 32 0.88
gi|239749217 PREDICTED: similar to Mucin-12, partial [Homo sapiens] 32 1.5
gi|38261971 cyclic AMP-regulated phosphoprotein, 21 kD isoform 1... 32 1.5
gi|224611699 GATA binding protein 2 isoform 1 [Homo sapiens] 31 2.0
gi|20070352 GATA binding protein 2 isoform 1 [Homo sapiens] 31 2.0
gi|224611701 GATA binding protein 2 isoform 2 [Homo sapiens] 31 2.0
gi|239754668 PREDICTED: mucin 12 [Homo sapiens] 31 2.0
gi|111120318 NK6 transcription factor related, locus 1 [Homo sap... 31 2.0
gi|205361109 multiple C2 domains, transmembrane 1 isoform L [Hom... 31 2.0
gi|116235456 ring finger protein 214 [Homo sapiens] 31 2.0
gi|116235451 ring finger protein 214 [Homo sapiens] 31 2.0
>gi|56549649 nuclear factor I/X (CCAAT-binding transcription factor)
[Homo sapiens]
Length = 441
Score = 909 bits (2350), Expect = 0.0
Identities = 441/441 (100%), Positives = 441/441 (100%)
Query: 1 MYSPYCLTQDEFHPFIEALLPHVRAFSYTWFNLQARKRKYFKKHEKRMSKDEERAVKDEL 60
MYSPYCLTQDEFHPFIEALLPHVRAFSYTWFNLQARKRKYFKKHEKRMSKDEERAVKDEL
Sbjct: 1 MYSPYCLTQDEFHPFIEALLPHVRAFSYTWFNLQARKRKYFKKHEKRMSKDEERAVKDEL 60
Query: 61 LGEKPEIKQKWASRLLAKLRKDIRPEFREDFVLTITGKKPPCCVLSNPDQKGKIRRIDCL 120
LGEKPEIKQKWASRLLAKLRKDIRPEFREDFVLTITGKKPPCCVLSNPDQKGKIRRIDCL
Sbjct: 61 LGEKPEIKQKWASRLLAKLRKDIRPEFREDFVLTITGKKPPCCVLSNPDQKGKIRRIDCL 120
Query: 121 RQADKVWRLDLVMVILFKGIPLESTDGERLYKSPQCSNPGLCVQPHHIGVTIKELDLYLA 180
RQADKVWRLDLVMVILFKGIPLESTDGERLYKSPQCSNPGLCVQPHHIGVTIKELDLYLA
Sbjct: 121 RQADKVWRLDLVMVILFKGIPLESTDGERLYKSPQCSNPGLCVQPHHIGVTIKELDLYLA 180
Query: 181 YFVHTPESGQSDSSNQQGDADIKPLPNGHLSFQDCFVTSGVWNVTELVRVSQTPVATASG 240
YFVHTPESGQSDSSNQQGDADIKPLPNGHLSFQDCFVTSGVWNVTELVRVSQTPVATASG
Sbjct: 181 YFVHTPESGQSDSSNQQGDADIKPLPNGHLSFQDCFVTSGVWNVTELVRVSQTPVATASG 240
Query: 241 PNFSLADLESPSYYNINQVTLGRRSITSPPSTSTTKRPKSIDDSEMESPVDDVFYPGTGR 300
PNFSLADLESPSYYNINQVTLGRRSITSPPSTSTTKRPKSIDDSEMESPVDDVFYPGTGR
Sbjct: 241 PNFSLADLESPSYYNINQVTLGRRSITSPPSTSTTKRPKSIDDSEMESPVDDVFYPGTGR 300
Query: 301 SPAAGSSQSSGWPNDVDAGPASLKKSGKLDFCSALSSQGSSPRMAFTHHPLPVLAGVRPG 360
SPAAGSSQSSGWPNDVDAGPASLKKSGKLDFCSALSSQGSSPRMAFTHHPLPVLAGVRPG
Sbjct: 301 SPAAGSSQSSGWPNDVDAGPASLKKSGKLDFCSALSSQGSSPRMAFTHHPLPVLAGVRPG 360
Query: 361 SPRATASALHFPSTSIIQQSSPYFTHPTIRYHHHHGQDSLKEFVQFVCSDGSGQATGQHS 420
SPRATASALHFPSTSIIQQSSPYFTHPTIRYHHHHGQDSLKEFVQFVCSDGSGQATGQHS
Sbjct: 361 SPRATASALHFPSTSIIQQSSPYFTHPTIRYHHHHGQDSLKEFVQFVCSDGSGQATGQHS 420
Query: 421 QRQAPPLPTGLSASDPGTATF 441
QRQAPPLPTGLSASDPGTATF
Sbjct: 421 QRQAPPLPTGLSASDPGTATF 441
>gi|224465184 nuclear factor I/A isoform 4 [Homo sapiens]
Length = 554
Score = 602 bits (1553), Expect = e-172
Identities = 311/422 (73%), Positives = 350/422 (82%), Gaps = 13/422 (3%)
Query: 1 MYSPYCLTQDEFHPFIEALLPHVRAFSYTWFNLQARKRKYFKKHEKRMSKDEERAVKDEL 60
MYSP CLTQDEFHPFIEALLPHVRAF+YTWFNLQARKRKYFKKHEKRMSK+EERAVKDEL
Sbjct: 46 MYSPLCLTQDEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKEEERAVKDEL 105
Query: 61 LGEKPEIKQKWASRLLAKLRKDIRPEFREDFVLTITGKKPPCCVLSNPDQKGKIRRIDCL 120
L EKPE+KQKWASRLLAKLRKDIRPE+REDFVLT+TGKKPPCCVLSNPDQKGK+RRIDCL
Sbjct: 106 LSEKPEVKQKWASRLLAKLRKDIRPEYREDFVLTVTGKKPPCCVLSNPDQKGKMRRIDCL 165
Query: 121 RQADKVWRLDLVMVILFKGIPLESTDGERLYKSPQCSNPGLCVQPHHIGVTIKELDLYLA 180
RQADKVWRLDLVMVILFKGIPLESTDGERL KSPQCSNPGLCVQPHHIGV++KELDLYLA
Sbjct: 166 RQADKVWRLDLVMVILFKGIPLESTDGERLVKSPQCSNPGLCVQPHHIGVSVKELDLYLA 225
Query: 181 YFVHTPESGQSDSSNQQGDADIKPLP-NGHLSFQDCFVTSGVWNVTELVRVSQTPVATAS 239
YFVH +S QS+S +Q DADIK P NGHL FQD FVTSGV++VTELVRVSQTP+A +
Sbjct: 226 YFVHAADSSQSESPSQPSDADIKDQPENGHLGFQDSFVTSGVFSVTELVRVSQTPIAAGT 285
Query: 240 GPNFSLADLESPSYYNINQVTLGRRSITSPPSTSTTKRPKSIDDSEMESPVDDVFYPGTG 299
GPNFSL+DLES SYY+++ + RRS+ S STS+TKR KS++D EM+SP ++ FY G G
Sbjct: 286 GPNFSLSDLESSSYYSMSPGAM-RRSLPSTSSTSSTKRLKSVED-EMDSPGEEPFYTGQG 343
Query: 300 RSPAAGSSQSSGWPNDVDAG---PASLKKSGKLDFCSALSSQGSSPRMAFTHHPLPVLAG 356
RSP +G SQSSGW ++V+ G P +LKKS K F S SQ SS AFT H PV+ G
Sbjct: 344 RSPGSG-SQSSGW-HEVEPGMPSPTTLKKSEKSGFSSPSPSQTSSLGTAFTQHHRPVITG 401
Query: 357 VRPGSPRATASALHFPSTSIIQQSSPYFTHPTIRYHHHHGQDSLKEFVQFVCSDGSGQAT 416
R SP AT S LHFP++ IIQQ PYF+HP IRY H Q++LKEFVQ VC D +GQ
Sbjct: 402 PR-ASPHATPSTLHFPTSPIIQQPGPYFSHPAIRY---HPQETLKEFVQLVCPD-AGQQA 456
Query: 417 GQ 418
GQ
Sbjct: 457 GQ 458
>gi|30840980 nuclear factor I/A isoform 2 [Homo sapiens]
Length = 498
Score = 602 bits (1553), Expect = e-172
Identities = 311/422 (73%), Positives = 350/422 (82%), Gaps = 13/422 (3%)
Query: 1 MYSPYCLTQDEFHPFIEALLPHVRAFSYTWFNLQARKRKYFKKHEKRMSKDEERAVKDEL 60
MYSP CLTQDEFHPFIEALLPHVRAF+YTWFNLQARKRKYFKKHEKRMSK+EERAVKDEL
Sbjct: 1 MYSPLCLTQDEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKEEERAVKDEL 60
Query: 61 LGEKPEIKQKWASRLLAKLRKDIRPEFREDFVLTITGKKPPCCVLSNPDQKGKIRRIDCL 120
L EKPE+KQKWASRLLAKLRKDIRPE+REDFVLT+TGKKPPCCVLSNPDQKGK+RRIDCL
Sbjct: 61 LSEKPEVKQKWASRLLAKLRKDIRPEYREDFVLTVTGKKPPCCVLSNPDQKGKMRRIDCL 120
Query: 121 RQADKVWRLDLVMVILFKGIPLESTDGERLYKSPQCSNPGLCVQPHHIGVTIKELDLYLA 180
RQADKVWRLDLVMVILFKGIPLESTDGERL KSPQCSNPGLCVQPHHIGV++KELDLYLA
Sbjct: 121 RQADKVWRLDLVMVILFKGIPLESTDGERLVKSPQCSNPGLCVQPHHIGVSVKELDLYLA 180
Query: 181 YFVHTPESGQSDSSNQQGDADIKPLP-NGHLSFQDCFVTSGVWNVTELVRVSQTPVATAS 239
YFVH +S QS+S +Q DADIK P NGHL FQD FVTSGV++VTELVRVSQTP+A +
Sbjct: 181 YFVHAADSSQSESPSQPSDADIKDQPENGHLGFQDSFVTSGVFSVTELVRVSQTPIAAGT 240
Query: 240 GPNFSLADLESPSYYNINQVTLGRRSITSPPSTSTTKRPKSIDDSEMESPVDDVFYPGTG 299
GPNFSL+DLES SYY+++ + RRS+ S STS+TKR KS++D EM+SP ++ FY G G
Sbjct: 241 GPNFSLSDLESSSYYSMSPGAM-RRSLPSTSSTSSTKRLKSVED-EMDSPGEEPFYTGQG 298
Query: 300 RSPAAGSSQSSGWPNDVDAG---PASLKKSGKLDFCSALSSQGSSPRMAFTHHPLPVLAG 356
RSP +G SQSSGW ++V+ G P +LKKS K F S SQ SS AFT H PV+ G
Sbjct: 299 RSPGSG-SQSSGW-HEVEPGMPSPTTLKKSEKSGFSSPSPSQTSSLGTAFTQHHRPVITG 356
Query: 357 VRPGSPRATASALHFPSTSIIQQSSPYFTHPTIRYHHHHGQDSLKEFVQFVCSDGSGQAT 416
R SP AT S LHFP++ IIQQ PYF+HP IRY H Q++LKEFVQ VC D +GQ
Sbjct: 357 PR-ASPHATPSTLHFPTSPIIQQPGPYFSHPAIRY---HPQETLKEFVQLVCPD-AGQQA 411
Query: 417 GQ 418
GQ
Sbjct: 412 GQ 413
>gi|197927284 nuclear factor I/A isoform 1 [Homo sapiens]
Length = 509
Score = 602 bits (1553), Expect = e-172
Identities = 311/422 (73%), Positives = 350/422 (82%), Gaps = 13/422 (3%)
Query: 1 MYSPYCLTQDEFHPFIEALLPHVRAFSYTWFNLQARKRKYFKKHEKRMSKDEERAVKDEL 60
MYSP CLTQDEFHPFIEALLPHVRAF+YTWFNLQARKRKYFKKHEKRMSK+EERAVKDEL
Sbjct: 1 MYSPLCLTQDEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKEEERAVKDEL 60
Query: 61 LGEKPEIKQKWASRLLAKLRKDIRPEFREDFVLTITGKKPPCCVLSNPDQKGKIRRIDCL 120
L EKPE+KQKWASRLLAKLRKDIRPE+REDFVLT+TGKKPPCCVLSNPDQKGK+RRIDCL
Sbjct: 61 LSEKPEVKQKWASRLLAKLRKDIRPEYREDFVLTVTGKKPPCCVLSNPDQKGKMRRIDCL 120
Query: 121 RQADKVWRLDLVMVILFKGIPLESTDGERLYKSPQCSNPGLCVQPHHIGVTIKELDLYLA 180
RQADKVWRLDLVMVILFKGIPLESTDGERL KSPQCSNPGLCVQPHHIGV++KELDLYLA
Sbjct: 121 RQADKVWRLDLVMVILFKGIPLESTDGERLVKSPQCSNPGLCVQPHHIGVSVKELDLYLA 180
Query: 181 YFVHTPESGQSDSSNQQGDADIKPLP-NGHLSFQDCFVTSGVWNVTELVRVSQTPVATAS 239
YFVH +S QS+S +Q DADIK P NGHL FQD FVTSGV++VTELVRVSQTP+A +
Sbjct: 181 YFVHAADSSQSESPSQPSDADIKDQPENGHLGFQDSFVTSGVFSVTELVRVSQTPIAAGT 240
Query: 240 GPNFSLADLESPSYYNINQVTLGRRSITSPPSTSTTKRPKSIDDSEMESPVDDVFYPGTG 299
GPNFSL+DLES SYY+++ + RRS+ S STS+TKR KS++D EM+SP ++ FY G G
Sbjct: 241 GPNFSLSDLESSSYYSMSPGAM-RRSLPSTSSTSSTKRLKSVED-EMDSPGEEPFYTGQG 298
Query: 300 RSPAAGSSQSSGWPNDVDAG---PASLKKSGKLDFCSALSSQGSSPRMAFTHHPLPVLAG 356
RSP +G SQSSGW ++V+ G P +LKKS K F S SQ SS AFT H PV+ G
Sbjct: 299 RSPGSG-SQSSGW-HEVEPGMPSPTTLKKSEKSGFSSPSPSQTSSLGTAFTQHHRPVITG 356
Query: 357 VRPGSPRATASALHFPSTSIIQQSSPYFTHPTIRYHHHHGQDSLKEFVQFVCSDGSGQAT 416
R SP AT S LHFP++ IIQQ PYF+HP IRY H Q++LKEFVQ VC D +GQ
Sbjct: 357 PR-ASPHATPSTLHFPTSPIIQQPGPYFSHPAIRY---HPQETLKEFVQLVCPD-AGQQA 411
Query: 417 GQ 418
GQ
Sbjct: 412 GQ 413
>gi|224465182 nuclear factor I/A isoform 3 [Homo sapiens]
Length = 501
Score = 585 bits (1508), Expect = e-167
Identities = 303/413 (73%), Positives = 342/413 (82%), Gaps = 13/413 (3%)
Query: 10 DEFHPFIEALLPHVRAFSYTWFNLQARKRKYFKKHEKRMSKDEERAVKDELLGEKPEIKQ 69
DEFHPFIEALLPHVRAF+YTWFNLQARKRKYFKKHEKRMSK+EERAVKDELL EKPE+KQ
Sbjct: 2 DEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKEEERAVKDELLSEKPEVKQ 61
Query: 70 KWASRLLAKLRKDIRPEFREDFVLTITGKKPPCCVLSNPDQKGKIRRIDCLRQADKVWRL 129
KWASRLLAKLRKDIRPE+REDFVLT+TGKKPPCCVLSNPDQKGK+RRIDCLRQADKVWRL
Sbjct: 62 KWASRLLAKLRKDIRPEYREDFVLTVTGKKPPCCVLSNPDQKGKMRRIDCLRQADKVWRL 121
Query: 130 DLVMVILFKGIPLESTDGERLYKSPQCSNPGLCVQPHHIGVTIKELDLYLAYFVHTPESG 189
DLVMVILFKGIPLESTDGERL KSPQCSNPGLCVQPHHIGV++KELDLYLAYFVH +S
Sbjct: 122 DLVMVILFKGIPLESTDGERLVKSPQCSNPGLCVQPHHIGVSVKELDLYLAYFVHAADSS 181
Query: 190 QSDSSNQQGDADIKPLP-NGHLSFQDCFVTSGVWNVTELVRVSQTPVATASGPNFSLADL 248
QS+S +Q DADIK P NGHL FQD FVTSGV++VTELVRVSQTP+A +GPNFSL+DL
Sbjct: 182 QSESPSQPSDADIKDQPENGHLGFQDSFVTSGVFSVTELVRVSQTPIAAGTGPNFSLSDL 241
Query: 249 ESPSYYNINQVTLGRRSITSPPSTSTTKRPKSIDDSEMESPVDDVFYPGTGRSPAAGSSQ 308
ES SYY+++ + RRS+ S STS+TKR KS++D EM+SP ++ FY G GRSP +G SQ
Sbjct: 242 ESSSYYSMSPGAM-RRSLPSTSSTSSTKRLKSVED-EMDSPGEEPFYTGQGRSPGSG-SQ 298
Query: 309 SSGWPNDVDAG---PASLKKSGKLDFCSALSSQGSSPRMAFTHHPLPVLAGVRPGSPRAT 365
SSGW ++V+ G P +LKKS K F S SQ SS AFT H PV+ G R SP AT
Sbjct: 299 SSGW-HEVEPGMPSPTTLKKSEKSGFSSPSPSQTSSLGTAFTQHHRPVITGPR-ASPHAT 356
Query: 366 ASALHFPSTSIIQQSSPYFTHPTIRYHHHHGQDSLKEFVQFVCSDGSGQATGQ 418
S LHFP++ IIQQ PYF+HP IRY H Q++LKEFVQ VC D +GQ GQ
Sbjct: 357 PSTLHFPTSPIIQQPGPYFSHPAIRY---HPQETLKEFVQLVCPD-AGQQAGQ 405
>gi|45505149 nuclear factor I/C isoform 1 [Homo sapiens]
Length = 428
Score = 473 bits (1216), Expect = e-133
Identities = 260/421 (61%), Positives = 302/421 (71%), Gaps = 13/421 (3%)
Query: 3 SPYCLTQDEFHPFIEALLPHVRAFSYTWFNLQARKRKYFKKHEKRMSKDEERAVKDELLG 62
SP CLTQDEFHPFIEALLPHVRAF+YTWFNLQARKRKYFKKHEKRMSKDEERAVKDELLG
Sbjct: 4 SPLCLTQDEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKDEERAVKDELLG 63
Query: 63 EKPEIKQKWASRLLAKLRKDIRPEFREDFVLTITGKKPPCCVLSNPDQKGKIRRIDCLRQ 122
EKPE+KQKWASRLLAKLRKDIRPE REDFVL+ITGKK P CVLSNPDQKGK+RRIDCLRQ
Sbjct: 64 EKPEVKQKWASRLLAKLRKDIRPECREDFVLSITGKKAPGCVLSNPDQKGKMRRIDCLRQ 123
Query: 123 ADKVWRLDLVMVILFKGIPLESTDGERLYKSPQCSNPGLCVQPHHIGVTIKELDLYLAYF 182
ADKVWRLDLVMVILFKGIPLESTDGERL K+ QC +P LCVQPHHIGV +KELDLYLAYF
Sbjct: 124 ADKVWRLDLVMVILFKGIPLESTDGERLVKAAQCGHPVLCVQPHHIGVAVKELDLYLAYF 183
Query: 183 VHTPESGQSDSSNQ---QGDADIKPLPNGHLSFQDCFVTSGVWNVTELVRVSQTPVATAS 239
V ++ QS S D KP+ FQ+ FVTSGV++VTEL++VS+TPV T +
Sbjct: 184 VRERDAEQSGSPRTGMGSDQEDSKPITLDTTDFQESFVTSGVFSVTELIQVSRTPVVTGT 243
Query: 240 GPNFSLADLESPSYYNINQVTLGRRSITSPPSTSTTKRPKSIDDSEMESPVDDVFYPGTG 299
GPNFSL +L+ Y++N + G R S+S +KR KS ME VD
Sbjct: 244 GPNFSLGELQGHLAYDLNPASTGLRRTLPSTSSSGSKRHKS---GSMEEDVDTSPGGDYY 300
Query: 300 RSPAAGSSQSSGWPNDVDAGPASLKKSGKLDFCSALS-SQGSSPRM-AFTHHPLPVLAGV 357
SP++ +S S W D++ G +S K ++D S S SPR+ +FT H PV+A V
Sbjct: 301 TSPSSPTSSSRNWTEDMEGGISSPVKKTEMDKSPFNSPSPQDSPRLSSFTQHHRPVIA-V 359
Query: 358 RPGSPRA--TASALHFPSTSII-QQSSPYFTHPTIRYHHH-HGQDSLKEFVQFVCSDGSG 413
G R+ +SALHFP+TSI+ Q +S YF H IRY H + QD LK+ V C S
Sbjct: 360 HSGIARSPHPSSALHFPTTSILPQTASTYFPHTAIRYPPHLNPQDPLKDLVSLACDPASQ 419
Query: 414 Q 414
Q
Sbjct: 420 Q 420
>gi|93004092 nuclear factor I/B [Homo sapiens]
Length = 420
Score = 467 bits (1201), Expect = e-131
Identities = 264/414 (63%), Positives = 308/414 (74%), Gaps = 22/414 (5%)
Query: 1 MYSPYCLTQDEFHPFIEALLPHVRAFSYTWFNLQARKRKYFKKHEKRMSKDEERAVKDEL 60
MYSP CLTQDEFHPFIEALLPHVRA +YTWFNLQARKRKYFKKHEKRMSKDEERAVKDEL
Sbjct: 2 MYSPICLTQDEFHPFIEALLPHVRAIAYTWFNLQARKRKYFKKHEKRMSKDEERAVKDEL 61
Query: 61 LGEKPEIKQKWASRLLAKLRKDIRPEFREDFVLTITGKKPPCCVLSNPDQKGKIRRIDCL 120
L EKPEIKQKWASRLLAKLRKDIR E+REDFVLT+TGKK PCCVLSNPDQKGKIRRIDCL
Sbjct: 62 LSEKPEIKQKWASRLLAKLRKDIRQEYREDFVLTVTGKKHPCCVLSNPDQKGKIRRIDCL 121
Query: 121 RQADKVWRLDLVMVILFKGIPLESTDGERLYKSPQCSNPGLCVQPHHIGVTIKELDLYLA 180
RQADKVWRLDLVMVILFKGIPLESTDGERL KSP C+NP LCVQPHHI V++KELDL+LA
Sbjct: 122 RQADKVWRLDLVMVILFKGIPLESTDGERLMKSPHCTNPALCVQPHHITVSVKELDLFLA 181
Query: 181 YFVHTPESGQSDSSNQQGDADIKPLPNGHLSFQDCFVTSGVWNVTELVRVSQTPVATASG 240
Y+V +SGQS S + A P G+L +D FV SGV+NV+ELVRVS+TP+ +G
Sbjct: 182 YYVQEQDSGQSGSPSHNDPAKNPP---GYL--EDSFVKSGVFNVSELVRVSRTPITQGTG 236
Query: 241 PNFSLADLES-PSYYNINQVTLGRRSITSPPSTSTTKRPK--SIDDSEMESPVDDVFYPG 297
NF + ++ S P Y+++N +RS++SPPS +KRPK SID++ SP D FYP
Sbjct: 237 VNFPIGEIPSQPYYHDMNSGVNLQRSLSSPPS---SKRPKTISIDENMEPSPTGD-FYPS 292
Query: 298 TGRSPAAGSSQSSGWPNDVDAGPASLKKSGKLDFCSALSSQGSSPRMA-FTHHPLPVLAG 356
SPAAGS D+ + P ++KK K F SA S Q SSPR++ F H P + G
Sbjct: 293 PS-SPAAGSRTWHERDQDM-SSPTTMKKPEKPLFSSA-SPQDSSPRLSTFPQHHHPGIPG 349
Query: 357 VRPG--SPRA--TASALHFPSTSIIQQS-SPYFTHPTIRYHHH-HGQDSLKEFV 404
V S R S L FP+ +I+ + S YF+HPTIRY H + QD+LK +V
Sbjct: 350 VAHSVISTRTPPPPSPLPFPTQAILPPAPSSYFSHPTIRYPPHLNPQDTLKNYV 403
>gi|45505151 nuclear factor I/C isoform 2 [Homo sapiens]
Length = 499
Score = 460 bits (1184), Expect = e-129
Identities = 261/441 (59%), Positives = 305/441 (69%), Gaps = 26/441 (5%)
Query: 10 DEFHPFIEALLPHVRAFSYTWFNLQARKRKYFKKHEKRMSKDEERAVKDELLGEKPEIKQ 69
DEFHPFIEALLPHVRAF+YTWFNLQARKRKYFKKHEKRMSKDEERAVKDELLGEKPE+KQ
Sbjct: 2 DEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKDEERAVKDELLGEKPEVKQ 61
Query: 70 KWASRLLAKLRKDIRPEFREDFVLTITGKKPPCCVLSNPDQKGKIRRIDCLRQADKVWRL 129
KWASRLLAKLRKDIRPE REDFVL+ITGKK P CVLSNPDQKGK+RRIDCLRQADKVWRL
Sbjct: 62 KWASRLLAKLRKDIRPECREDFVLSITGKKAPGCVLSNPDQKGKMRRIDCLRQADKVWRL 121
Query: 130 DLVMVILFKGIPLESTDGERLYKSPQCSNPGLCVQPHHIGVTIKELDLYLAYFVHTPESG 189
DLVMVILFKGIPLESTDGERL K+ QC +P LCVQPHHIGV +KELDLYLAYFV ++
Sbjct: 122 DLVMVILFKGIPLESTDGERLVKAAQCGHPVLCVQPHHIGVAVKELDLYLAYFVRERDAE 181
Query: 190 QSDSSNQ---QGDADIKPLPNGHLSFQDCFVTSGVWNVTELVRVSQTPVATASGPNFSLA 246
QS S D KP+ FQ+ FVTSGV++VTEL++VS+TPV T +GPNFSL
Sbjct: 182 QSGSPRTGMGSDQEDSKPITLDTTDFQESFVTSGVFSVTELIQVSRTPVVTGTGPNFSLG 241
Query: 247 DLESPSYYNINQVTLGRRSITSPPSTSTTKRPKSIDDSEMESPVDDVFYPGTGRSPAAGS 306
+L+ Y++N + G R S+S +KR KS ME VD SP++ +
Sbjct: 242 ELQGHLAYDLNPASTGLRRTLPSTSSSGSKRHKS---GSMEEDVDTSPGGDYYTSPSSPT 298
Query: 307 SQSSGWPNDVDAGPASLKKSGKLDFCSALS-SQGSSPRM-AFTHHPLPVLAGVRPGSPRA 364
S S W D++ G +S K ++D S S SPR+ +FT H PV+A V G R+
Sbjct: 299 SSSRNWTEDMEGGISSPVKKTEMDKSPFNSPSPQDSPRLSSFTQHHRPVIA-VHSGIARS 357
Query: 365 --TASALHFPSTSII-QQSSPYFTHPTIRYHHH-HGQDSLKEFVQFVCSDGSGQ-----A 415
+SALHFP+TSI+ Q +S YF H IRY H + QD LK+ V C S Q
Sbjct: 358 PHPSSALHFPTTSILPQTASTYFPHTAIRYPPHLNPQDPLKDLVSLACDPASQQPGPLNG 417
Query: 416 TGQ--------HSQRQAPPLP 428
+GQ +Q APP P
Sbjct: 418 SGQLKMPSHCLSAQMLAPPPP 438
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 37.7 bits (86), Expect = 0.021
Identities = 52/206 (25%), Positives = 71/206 (34%), Gaps = 19/206 (9%)
Query: 236 ATASGPNFSLADLES--PSYYNINQVTLGRRSITSPPSTSTTKRPK--SIDDSEMESPVD 291
A+AS P L PS + + Q G + P T P S+ + +P
Sbjct: 313 ASASPPGLGAQPLPGHLPSPHAMGQ---GMGGLPPGPEKGPTLAPSPHSLPPASSSAPAP 369
Query: 292 DVFYP--GTGRSPAAGSSQSSGWPNDVDAGPASLK-KSGKLDFCSALSSQGSSPRMAFTH 348
+ +P + S AA SS SS + PAS S F S S+ +T
Sbjct: 370 PMRFPYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPHSFPPPTSLSVSNQPPKYTQ 429
Query: 349 HPLPVLAGVRPGSP------RATASALHFPSTSIIQQSSPYFTHPTIRYHHHHGQDSLKE 402
LP A G P R A++ P + HP + HHHH Q ++
Sbjct: 430 PSLPSQAVWSQGPPPPPPYGRLLANSNAHPGPFPPSTGAQSTAHPPVSTHHHHHQQQQQQ 489
Query: 403 FVQFVCSDGSGQATGQHSQRQAPPLP 428
Q Q QH PP P
Sbjct: 490 QQQ---QQQQQQQQQQHHGNSGPPPP 512
>gi|55750041 atrophin-1 [Homo sapiens]
Length = 1190
Score = 37.7 bits (86), Expect = 0.021
Identities = 52/206 (25%), Positives = 71/206 (34%), Gaps = 19/206 (9%)
Query: 236 ATASGPNFSLADLES--PSYYNINQVTLGRRSITSPPSTSTTKRPK--SIDDSEMESPVD 291
A+AS P L PS + + Q G + P T P S+ + +P
Sbjct: 313 ASASPPGLGAQPLPGHLPSPHAMGQ---GMGGLPPGPEKGPTLAPSPHSLPPASSSAPAP 369
Query: 292 DVFYP--GTGRSPAAGSSQSSGWPNDVDAGPASLK-KSGKLDFCSALSSQGSSPRMAFTH 348
+ +P + S AA SS SS + PAS S F S S+ +T
Sbjct: 370 PMRFPYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPHSFPPPTSLSVSNQPPKYTQ 429
Query: 349 HPLPVLAGVRPGSP------RATASALHFPSTSIIQQSSPYFTHPTIRYHHHHGQDSLKE 402
LP A G P R A++ P + HP + HHHH Q ++
Sbjct: 430 PSLPSQAVWSQGPPPPPPYGRLLANSNAHPGPFPPSTGAQSTAHPPVSTHHHHHQQQQQQ 489
Query: 403 FVQFVCSDGSGQATGQHSQRQAPPLP 428
Q Q QH PP P
Sbjct: 490 QQQ---QQQQQQQQQQHHGNSGPPPP 512
>gi|61676188 HECT, UBA and WWE domain containing 1 [Homo sapiens]
Length = 4374
Score = 35.0 bits (79), Expect = 0.14
Identities = 74/295 (25%), Positives = 102/295 (34%), Gaps = 43/295 (14%)
Query: 141 PLESTDGERLYKSPQCS----NPGLCVQPHHIGVTIKELDLYLAYFVHTPESGQSD---- 192
P+ES G L + C+ + L Q + + Y+ FVHT GQS+
Sbjct: 861 PIESPGGSVLLRELACAGNVADATLSAQATPLLHALTAAHAYIMMFVHTCRVGQSEIRSI 920
Query: 193 SSNQQGDADIKPLPNGHLSFQDCFVTSGVWNVTELVRVSQTPVATASGPNFSLADLES-- 250
S NQ G L LS S VW T L+ + TP + SG F AD++
Sbjct: 921 SVNQWG----SQLGLSVLSKLSQLYCSLVWESTVLLSLC-TPNSLPSGCEFGQADMQKLV 975
Query: 251 PSYYNINQVTLGRRSITSPPSTSTTKRPKSIDDSEMESPVDDVFYPGTGRSPAAGSSQSS 310
P G+RS + + + E D P P A S S
Sbjct: 976 PKDEKAGTTQGGKRSDGEQDGAAGSMDASTQGLLEGIGLDGDTLAPMETDEPTA--SDSK 1033
Query: 311 GWPNDVDAGPASLKKSGKLDFCSALSSQ--------------GSSPRMAFTHHPLPVLAG 356
G A A +K+ L S+ + GS R +HH
Sbjct: 1034 GKSKITPAMAARIKQIKPLLSASSRLGRALAELFGLLVKLCVGSPVRQRRSHHAASTTTA 1093
Query: 357 VRPGSPRATASALHFPSTSIIQQSSPYFTHPTIRYHHHHGQDSLKEFVQFVCSDG 411
P + R+TASAL T + P +T PT R+ F+CS G
Sbjct: 1094 PTPAA-RSTASALTKLLTKGLSWQPPPYT-PTPRF----------RLTFFICSVG 1136
>gi|67514036 SH3-domain kinase binding protein 1 isoform b [Homo
sapiens]
Length = 628
Score = 34.7 bits (78), Expect = 0.18
Identities = 47/176 (26%), Positives = 68/176 (38%), Gaps = 21/176 (11%)
Query: 269 PPSTSTTKRPKSIDDSEMESPVDDVFYPGTGRSP---AAGSSQSSGWPNDVDAGPASLKK 325
PP T++ RP ++ E PV + + G SP AGSS S D+ +
Sbjct: 368 PPKTNSLSRPGALPPRRPERPVGPLTHT-RGDSPKIDLAGSSLSGILDKDLS------DR 420
Query: 326 SGKLDFCSALSSQGSSPRMAFTHHPLPVLAGVRPGSPRATASALHFPSTSIIQQSSPYFT 385
S +D S S+ +++ P G RP S T+S+L P I SP
Sbjct: 421 SNDIDLEGFDSVVSSTEKLSHPTTSRPKATGRRPPSQSLTSSSLSSP--DIFDSPSPEED 478
Query: 386 HPTIRYHHHHGQDSLKEFVQFVCSDGSGQATGQHSQRQA--PPLPTGLSASDPGTA 439
H G D+ K+ + V Q S +A PP P ++A G A
Sbjct: 479 KEEHISLAHRGVDASKKTSKTV-------TISQVSDNKASLPPKPGTMAAGGGGPA 527
>gi|13994242 SH3-domain kinase binding protein 1 isoform a [Homo
sapiens]
Length = 665
Score = 34.7 bits (78), Expect = 0.18
Identities = 47/176 (26%), Positives = 68/176 (38%), Gaps = 21/176 (11%)
Query: 269 PPSTSTTKRPKSIDDSEMESPVDDVFYPGTGRSP---AAGSSQSSGWPNDVDAGPASLKK 325
PP T++ RP ++ E PV + + G SP AGSS S D+ +
Sbjct: 405 PPKTNSLSRPGALPPRRPERPVGPLTHT-RGDSPKIDLAGSSLSGILDKDLS------DR 457
Query: 326 SGKLDFCSALSSQGSSPRMAFTHHPLPVLAGVRPGSPRATASALHFPSTSIIQQSSPYFT 385
S +D S S+ +++ P G RP S T+S+L P I SP
Sbjct: 458 SNDIDLEGFDSVVSSTEKLSHPTTSRPKATGRRPPSQSLTSSSLSSP--DIFDSPSPEED 515
Query: 386 HPTIRYHHHHGQDSLKEFVQFVCSDGSGQATGQHSQRQA--PPLPTGLSASDPGTA 439
H G D+ K+ + V Q S +A PP P ++A G A
Sbjct: 516 KEEHISLAHRGVDASKKTSKTV-------TISQVSDNKASLPPKPGTMAAGGGGPA 564
>gi|58530845 zyxin [Homo sapiens]
Length = 572
Score = 34.7 bits (78), Expect = 0.18
Identities = 24/94 (25%), Positives = 36/94 (38%), Gaps = 5/94 (5%)
Query: 259 VTLGRRSITSPPSTSTTKRPKSIDDSEMESPVDDVFYPGTGRSPAAGSSQSSGWPNDVDA 318
V+L PP++S PK + +PV F PG + +Q G P + A
Sbjct: 245 VSLANTQPRGPPASSPAPAPKFSPVTPKFTPVASKFSPGAPGGSGSQPNQKLGHPEALSA 304
Query: 319 GPASLKKSGKLDFCSALSSQGSSPRMAFTHHPLP 352
G S + + Q PR+ HP+P
Sbjct: 305 GTGSPQPPS-----FTYAQQREKPRVQEKQHPVP 333
>gi|4508047 zyxin [Homo sapiens]
Length = 572
Score = 34.7 bits (78), Expect = 0.18
Identities = 24/94 (25%), Positives = 36/94 (38%), Gaps = 5/94 (5%)
Query: 259 VTLGRRSITSPPSTSTTKRPKSIDDSEMESPVDDVFYPGTGRSPAAGSSQSSGWPNDVDA 318
V+L PP++S PK + +PV F PG + +Q G P + A
Sbjct: 245 VSLANTQPRGPPASSPAPAPKFSPVTPKFTPVASKFSPGAPGGSGSQPNQKLGHPEALSA 304
Query: 319 GPASLKKSGKLDFCSALSSQGSSPRMAFTHHPLP 352
G S + + Q PR+ HP+P
Sbjct: 305 GTGSPQPPS-----FTYAQQREKPRVQEKQHPVP 333
>gi|88501738 TRIO and F-actin binding protein isoform 6 [Homo
sapiens]
Length = 2365
Score = 34.7 bits (78), Expect = 0.18
Identities = 28/126 (22%), Positives = 56/126 (44%), Gaps = 9/126 (7%)
Query: 267 TSPPSTSTTKRPKSIDDSEMESPVDDVFYPGTGRSPAAGSSQSSGWPNDVDAGPASLKKS 326
+ P ST++ P D ++ S + R +S++S ++ ++ +++
Sbjct: 250 SGPRSTTSQASPAQRDTAQAASTREIPRASSPHRITQRDTSRASSTQQEISRASSTQQET 309
Query: 327 GKLDFCSALSSQGSSPRMAFTHHPLPVLAGVRPGSPRAT----ASALHFPSTSIIQQSSP 382
+ A S+Q +PR + T P + + +PRA+ ++ L P TS QQ +P
Sbjct: 310 SR-----ASSTQEDTPRASSTQEDTPRASSTQWNTPRASSPSRSTQLDNPRTSSTQQDNP 364
Query: 383 YFTHPT 388
+ PT
Sbjct: 365 QTSFPT 370
>gi|169202626 PREDICTED: similar to mucin 5, partial [Homo sapiens]
Length = 2013
Score = 33.9 bits (76), Expect = 0.30
Identities = 28/97 (28%), Positives = 41/97 (42%), Gaps = 15/97 (15%)
Query: 231 SQTPVATASGPNFSLADLESPSYYNINQVTLGRRSITSPPSTSTTKRPKSIDDSEMESPV 290
S +P +T SGP + + + + S ++ SITS P+TSTT P S S
Sbjct: 1921 SASPASTTSGPGNTPSPVPTTS-----TISAPTTSITSAPTTSTTSAPTSSTTSA----- 1970
Query: 291 DDVFYPGTGRSPAAGSSQSSGWPNDVDAGPASLKKSG 327
P T + A SS +S + P + SG
Sbjct: 1971 -----PTTSTTSAPTSSTTSSPQTSTTSAPTTSTTSG 2002
>gi|91982772 mucin 17 [Homo sapiens]
Length = 4493
Score = 33.1 bits (74), Expect = 0.52
Identities = 41/162 (25%), Positives = 63/162 (38%), Gaps = 25/162 (15%)
Query: 230 VSQTPVATASGPNFSLADLESPSYYNINQVTLGRRSITSPPSTSTTKRPKSIDDSEMESP 289
VS TPVA++ N S ++S + QVT + +SPP+ P S SE +P
Sbjct: 459 VSTTPVASSEASNLSTTPVDSKT-----QVTTSTEASSSPPTAEVNSMPTS-TPSEGSTP 512
Query: 290 VDDVFYPGTGRSPAAGSSQSSGWPNDVD----------AGPASLKKSGKLDFCSALSSQG 339
+ + P A S S+ VD A +S G ++ S+G
Sbjct: 513 LTSM---SVSTMPVASSEASTLSTTPVDTSTPVTTSSEASSSSTTPEG-TSIPTSTPSEG 568
Query: 340 SSPRMAFTHHPLPVLAGVRPGSPRATASALHFPSTSIIQQSS 381
S+P +PV + S +T S S + + SS
Sbjct: 569 STPLT-----NMPVSTRLVVSSEASTTSTTPADSNTFVTTSS 605
Score = 30.0 bits (66), Expect = 4.4
Identities = 37/160 (23%), Positives = 58/160 (36%), Gaps = 11/160 (6%)
Query: 231 SQTPVATASGPNFSLADLESPSYYNINQVTLGRRSITSPPSTSTTKRPK-----SIDDSE 285
S TPV T++ S E S + T G +TS P +T S +
Sbjct: 656 SNTPVTTSTEATSSSTTAEGTSMPT-STYTEGSTPLTSMPVNTTLVASSEASTLSTTPVD 714
Query: 286 MESPVDDVFYPGTGRSPAAGSSQSSGWPNDVDAGPASLKKSGKLDFCSALSSQGSSPRMA 345
+PV + + A G+S + P++ S+ S L S S+ ++P
Sbjct: 715 TSTPVTTSTEASSSPTTADGASMPTSTPSEGSTPLTSMPVSKTLLTSSEASTLSTTPLDT 774
Query: 346 FTHHPLPVLAGVRPGSPRATASALHFPSTSIIQQSSPYFT 385
TH A P + T+ + PS + SP T
Sbjct: 775 STHITTSTEASCSPTTTEGTSMPISTPS-----EGSPLLT 809
Score = 30.0 bits (66), Expect = 4.4
Identities = 46/218 (21%), Positives = 81/218 (37%), Gaps = 19/218 (8%)
Query: 185 TPESGQSDSSNQQGDADIKPLPN-----GHLSFQDCFVTSGVWNVTELVRVSQTPVATAS 239
TP + +++S+ AD +P G V+ + +E +S TP+ T++
Sbjct: 717 TPVTTSTEASSSPTTADGASMPTSTPSEGSTPLTSMPVSKTLLTSSEASTLSTTPLDTST 776
Query: 240 GPNFSLADLESPSYYNINQVTLGRRSITSP----------PSTSTTKRPKSIDDSEMESP 289
S SP+ + + S SP P TS S + SP
Sbjct: 777 HITTSTEASCSPTTTEGTSMPISTPSEGSPLLTSIPVSITPVTSPEASTLSTTPVDSNSP 836
Query: 290 VDDVFYPGTGRSPAAGSSQSSGWPNDVDAGPASLKKSGKLDFCSALSSQGSSPRMAFTHH 349
V + +PA G+S + ++ S+ S L SA+S+ ++P T
Sbjct: 837 VTTSTEVSSSPTPAEGTSMPTSTYSEGRTPLTSMPVSTTLVATSAISTLSTTPVDTST-- 894
Query: 350 PLPVLAGVRPGSPRATASALHFPSTSIIQQSSPYFTHP 387
PV S T+ P+++ + S+P + P
Sbjct: 895 --PVTNSTEARSSPTTSEGTSMPTSTPGEGSTPLTSMP 930
Score = 29.3 bits (64), Expect = 7.5
Identities = 36/158 (22%), Positives = 67/158 (42%), Gaps = 6/158 (3%)
Query: 233 TPVATASGPNFSLADLESPSYYNINQVTLGRRSITSPPSTSTTKRPKSIDDSEMESPVDD 292
TP+ T++ + S ES + + G +TS P+ ST K S + + +PV+
Sbjct: 186 TPLTTSTQASSSPTTPESTTIPKSTN-SEGSTPLTSMPA-STMKVASSEAITLLTTPVE- 242
Query: 293 VFYPGTGRSPAAGSSQSSGWP---NDVDAGPASLKKSGKLDFCSALSSQGSSPRMAFTHH 349
+ P T + A+ S ++ P N +G ++ L +SS+ S+
Sbjct: 243 ISTPVTISAQASSSPTTAEGPSLSNSAPSGGSTPLTRMPLSVMLVVSSEASTLSTTPAAT 302
Query: 350 PLPVLAGVRPGSPRATASALHFPSTSIIQQSSPYFTHP 387
+PV+ S TA P+++ + S+P + P
Sbjct: 303 NIPVITSTEASSSPTTAEGTSIPTSTYTEGSTPLTSTP 340
Score = 28.9 bits (63), Expect = 9.7
Identities = 43/218 (19%), Positives = 85/218 (38%), Gaps = 19/218 (8%)
Query: 185 TPESGQSDSSNQQGDADIKPLPNGHLSFQDCFVTSGVWNVTELVR-----VSQTPVATAS 239
TP + +++ + ++ +PN + S +TS + T +V +S TPV T++
Sbjct: 1366 TPVTTSTEACSSPTTSEGTSMPNSNPSEGTTPLTSIPVSTTPVVSSEASTLSATPVDTST 1425
Query: 240 GPNFSLADLESP----------SYYNINQVTLGRRSITSPPSTSTTKRPKSIDDSEMESP 289
S SP S + + L +++ P ++ S + SP
Sbjct: 1426 PGTTSAEATSSPTTAEGISIPTSTPSEGKTPLKSIPVSNTPVANSEASTLSTTPVDSNSP 1485
Query: 290 VDDVFYPGTGRSPAAGSSQSSGWPNDVDAGPASLKKSGKLDFCSALSSQGSSPRMAFTHH 349
V + +PA G+S + P++ S+ S S ++S ++P + T
Sbjct: 1486 VVTSTAVSSSPTPAEGTSIAISTPSEGSTALTSIPVSTTTVASSEINSLSTTPAVTST-- 1543
Query: 350 PLPVLAGVRPGSPRATASALHFPSTSIIQQSSPYFTHP 387
PV + S TA +++ + S+P + P
Sbjct: 1544 --PVTTYSQASSSPTTADGTSMQTSTYSEGSTPLTSLP 1579
>gi|239742114 PREDICTED: similar to hCG2023245 [Homo sapiens]
Length = 329
Score = 32.3 bits (72), Expect = 0.88
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 8/56 (14%)
Query: 270 PSTSTTKRPKSIDDSEMESPVDDVFYPGTGRSPAA-----GSSQSSGWPNDVDAGP 320
P+ +RP S D P PG GR+P A GSS+++G P D GP
Sbjct: 127 PTEPAFRRPSSADRPLAPGPSSS---PGAGRAPRAMASPSGSSEATGKPRGRDGGP 179
>gi|171543895 ataxin 2 [Homo sapiens]
Length = 1313
Score = 32.3 bits (72), Expect = 0.88
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Query: 339 GSSPRMAFTHHPLPVLAGVRPGSPRATA--SALHFPSTSIIQQSSPYFTHPTIRYHH 393
G P H P+ ++ PG P+A SAL P PY THP+++ HH
Sbjct: 1254 GMVPSHPTAHAPMMLMTTQPPGGPQAALAQSALQ-PIPVSTTAHFPYMTHPSVQAHH 1309
>gi|239749217 PREDICTED: similar to Mucin-12, partial [Homo sapiens]
Length = 861
Score = 31.6 bits (70), Expect = 1.5
Identities = 45/196 (22%), Positives = 64/196 (32%), Gaps = 40/196 (20%)
Query: 265 SITSPPSTSTTKRP----------KSIDDSEMESPVDDVFYPGTGRSPAAGSS----QSS 310
S + P ST TT P +S P D PG+ + + G SS
Sbjct: 523 SHSRPGSTHTTAFPGSTTMPGLSQESTASHSSPGPTDTTLSPGSTTASSLGPEYTTFHSS 582
Query: 311 GWPNDVDAGPASLKKSGKLDFCSALSSQGSSPRMAF-------------THHPLPVLAGV 357
+ P + SG L+ + + S SP T H P
Sbjct: 583 PGSTETTLLPDNTTASGLLEASTPVHSSTRSPHTTLSPAGSTTRQGESTTFHSWPSSKDT 642
Query: 358 RPGSPRATASALHFPSTSIIQQSSPYFTHPTIR------------YHHHHGQDSLKEFVQ 405
RP P T++ + +TS SS TH + R YH G F +
Sbjct: 643 RPAPPTTTSAFVEPSTTSHGSPSSIPTTHISARSTTSGLVEESTTYHSSPGSTQTMHFPE 702
Query: 406 FVCSDGSG-QATGQHS 420
+ G G ++T HS
Sbjct: 703 SDTTSGRGEESTTSHS 718
>gi|38261971 cyclic AMP-regulated phosphoprotein, 21 kD isoform 1
[Homo sapiens]
Length = 812
Score = 31.6 bits (70), Expect = 1.5
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
Query: 321 ASLKKSGKLDFCSALSSQ--GSSPRMAFTHHPL---PVLAGVRPGSPRATASALHFPSTS 375
+S + +GKL + SS GSS ++ TH PL P+++GV GSP + +P
Sbjct: 397 SSTRSTGKLSKAGSESSSSAGSSGSLSRTHPPLQSTPLVSGVAAGSP----GCVPYPENG 452
Query: 376 IIQQSSPYFT 385
I Q +P T
Sbjct: 453 IGGQVAPSST 462
>gi|224611699 GATA binding protein 2 isoform 1 [Homo sapiens]
Length = 480
Score = 31.2 bits (69), Expect = 2.0
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 7/76 (9%)
Query: 301 SPAAGSSQSSGWPNDVDAGPASLKKSGKLDFCS----ALSSQGSSPRMAFTHHPLPVLAG 356
S +AG S + G D SL +S K++ S L++ G+ P THHP+P
Sbjct: 195 SSSAGGSAARGEDKDGVKYQVSLTESMKMESGSPLRPGLATMGTQPA---THHPIPTYPS 251
Query: 357 VRPGSPRATASALHFP 372
P + +S L P
Sbjct: 252 YVPAAAHDYSSGLFHP 267
>gi|20070352 GATA binding protein 2 isoform 1 [Homo sapiens]
Length = 480
Score = 31.2 bits (69), Expect = 2.0
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 7/76 (9%)
Query: 301 SPAAGSSQSSGWPNDVDAGPASLKKSGKLDFCS----ALSSQGSSPRMAFTHHPLPVLAG 356
S +AG S + G D SL +S K++ S L++ G+ P THHP+P
Sbjct: 195 SSSAGGSAARGEDKDGVKYQVSLTESMKMESGSPLRPGLATMGTQPA---THHPIPTYPS 251
Query: 357 VRPGSPRATASALHFP 372
P + +S L P
Sbjct: 252 YVPAAAHDYSSGLFHP 267
>gi|224611701 GATA binding protein 2 isoform 2 [Homo sapiens]
Length = 466
Score = 31.2 bits (69), Expect = 2.0
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 7/76 (9%)
Query: 301 SPAAGSSQSSGWPNDVDAGPASLKKSGKLDFCS----ALSSQGSSPRMAFTHHPLPVLAG 356
S +AG S + G D SL +S K++ S L++ G+ P THHP+P
Sbjct: 195 SSSAGGSAARGEDKDGVKYQVSLTESMKMESGSPLRPGLATMGTQPA---THHPIPTYPS 251
Query: 357 VRPGSPRATASALHFP 372
P + +S L P
Sbjct: 252 YVPAAAHDYSSGLFHP 267
>gi|239754668 PREDICTED: mucin 12 [Homo sapiens]
Length = 1952
Score = 31.2 bits (69), Expect = 2.0
Identities = 35/135 (25%), Positives = 52/135 (38%), Gaps = 27/135 (20%)
Query: 265 SITSPPSTSTTKRPKSIDDSEMESPVDDVFYPGTGRSPAAGSSQSSGWPNDVDAGPASLK 324
S +SP ST TT P+S S + P F+ G GS++++ P++ A
Sbjct: 1057 SHSSPGSTDTTLSPRSTTASSL-GPESTTFHSG------PGSTETTLLPDNTTA------ 1103
Query: 325 KSGKLDFCSALSSQGSSPRMAF-------------THHPLPVLAGVRPGSPRATASALHF 371
SG L+ + + S SPR T P P P T++ +
Sbjct: 1104 -SGLLEASTPVHSSTGSPRTTLSPAGSTTRQGESTTFQSWPSSKDTMPAPPTTTSAFVEL 1162
Query: 372 PSTSIIQQSSPYFTH 386
+TS SS TH
Sbjct: 1163 STTSHGSPSSIPTTH 1177
Score = 30.4 bits (67), Expect = 3.3
Identities = 46/175 (26%), Positives = 68/175 (38%), Gaps = 26/175 (14%)
Query: 265 SITSPPSTSTTKRPKSIDDSEMESPVDDVFYPGTGRSPAAGSSQSSGWPNDVDAG---PA 321
S +SP T TT P S S + P F+ GS++++ P++ A A
Sbjct: 616 SHSSPGPTDTTLSPGSTTASSL-GPEYTTFHS------RPGSTETTLLPDNTTASGLLEA 668
Query: 322 SLK-KSGKLDFCSALSSQGSSPRM--AFTHHPLPVLAGVRPGSPRATASALHFPSTSIIQ 378
S+ S + LS GS+ R + T H P RP P T++ + +TS
Sbjct: 669 SMPVHSSTRSPHTTLSPAGSTTRQGESTTFHSWPSSNDTRPAPPTTTSAFVEPSTTSHGS 728
Query: 379 QSSPYFTHPTIR------------YHHHHGQDSLKEFVQFVCSDGSG-QATGQHS 420
SS TH + R YH G F + + G G ++T HS
Sbjct: 729 PSSIPTTHISARSTTSGLVEESTTYHSSPGSTQTMHFPESDTTSGRGEESTTSHS 783
>gi|111120318 NK6 transcription factor related, locus 1 [Homo
sapiens]
Length = 367
Score = 31.2 bits (69), Expect = 2.0
Identities = 34/104 (32%), Positives = 45/104 (43%), Gaps = 11/104 (10%)
Query: 284 SEMESPVDDVFYP----GTGRSPAAGSSQSSGWPNDVDAGPASLKKSGKLDFCSALSSQG 339
+EM++P+ YP G S ++ SS SS P P LK LSS G
Sbjct: 29 AEMKTPLYPAAYPPLPAGPPSSSSSSSSSSSPSPPLGTHNPGGLKPPA----TGGLSSLG 84
Query: 340 SSPRM--AFTHHPLPVLAGVRPGSPRATASALHFPSTSIIQQSS 381
S P+ A T H + + RP P A+ +AL S S SS
Sbjct: 85 SPPQQLSAATPHGINDILS-RPSMPVASGAALPSASPSGSSSSS 127
>gi|205361109 multiple C2 domains, transmembrane 1 isoform L [Homo
sapiens]
Length = 999
Score = 31.2 bits (69), Expect = 2.0
Identities = 36/127 (28%), Positives = 45/127 (35%), Gaps = 35/127 (27%)
Query: 283 DSEMESPVDDVFYPGTGRSPAAGSSQSSGW------------------PNDVDAGPASLK 324
D+ SP V GTG +PA GS S W PN + P L+
Sbjct: 52 DTPSPSPPPPV---GTGNAPARGSGAGSRWSGFKKRKQVLDRVFSSSQPNLCCSSPEPLE 108
Query: 325 KSGKLDFCSALSSQGSSPRMAFTHHPLPVL---------AGVRPGSPRATASALHFPSTS 375
G + + QGS+ R H LP + AG P R+ SA S S
Sbjct: 109 PGG-----AGRAEQGSTLRRRIREHLLPAVKGPAAASGAAGGTPPGGRSPDSAPSSSSAS 163
Query: 376 IIQQSSP 382
SSP
Sbjct: 164 SSLSSSP 170
>gi|116235456 ring finger protein 214 [Homo sapiens]
Length = 703
Score = 31.2 bits (69), Expect = 2.0
Identities = 69/303 (22%), Positives = 123/303 (40%), Gaps = 60/303 (19%)
Query: 33 LQARKRKYFKKHEKRMSKDEERAVKDE-----LLGEKPEIKQKWASRLLAKLRKDIRPEF 87
LQ R+ + K H++ + ++ +K E + EK E QK L A++ K
Sbjct: 261 LQQRREEEMKNHQEILKAIQDVTIKREETKKKIEKEKKEFLQK-EQDLKAEIEKLCEKGR 319
Query: 88 REDFVLTITGKKPPCCVLSNPDQKGKIRRIDCLRQADKVWRLDLVMVILFKGIPLESTDG 147
RE + + + K +Q G+I R + + + ++ W+ ++ + LES
Sbjct: 320 REVWEMELDRLK---------NQDGEINR-NIMEETERAWKAEI--------LSLESRKE 361
Query: 148 ERLYKSPQCSNPGLCVQPHHIGVTIKELDLYLAYFVHTPESGQSDSSNQQGDADIKPLPN 207
+ K + KE +L+L Y TP + ++ S Q+ + + +
Sbjct: 362 LLVLKLEEAE---------------KEAELHLTYLKSTPPTLETVRSKQEWETRLNGVRI 406
Query: 208 GHLSFQDCFVT--SGVWNVTELVRVSQTPVATASGP----NFSLADLE-SPSY-----YN 255
+ +D F + V N +L + Q P T P +F L + SPS ++
Sbjct: 407 MKKNVRDQFNSHIQLVRNGAKLSSLPQIPTPTLPPPPSETDFMLQVFQPSPSLAPRMPFS 466
Query: 256 INQVTLGRRSITSPPSTST--TKRPKSIDDSEMESPVDDVFYPGT-GR-SPAAGSSQSSG 311
I QVT+ ++ P + + P S+ SP+ PG+ GR SP GS S
Sbjct: 467 IGQVTMPMVMPSADPRSLSFPILNPALSQPSQPSSPL-----PGSHGRNSPGLGSLVSPH 521
Query: 312 WPN 314
P+
Sbjct: 522 GPH 524
>gi|116235451 ring finger protein 214 [Homo sapiens]
Length = 703
Score = 31.2 bits (69), Expect = 2.0
Identities = 69/303 (22%), Positives = 123/303 (40%), Gaps = 60/303 (19%)
Query: 33 LQARKRKYFKKHEKRMSKDEERAVKDE-----LLGEKPEIKQKWASRLLAKLRKDIRPEF 87
LQ R+ + K H++ + ++ +K E + EK E QK L A++ K
Sbjct: 261 LQQRREEEMKNHQEILKAIQDVTIKREETKKKIEKEKKEFLQK-EQDLKAEIEKLCEKGR 319
Query: 88 REDFVLTITGKKPPCCVLSNPDQKGKIRRIDCLRQADKVWRLDLVMVILFKGIPLESTDG 147
RE + + + K +Q G+I R + + + ++ W+ ++ + LES
Sbjct: 320 REVWEMELDRLK---------NQDGEINR-NIMEETERAWKAEI--------LSLESRKE 361
Query: 148 ERLYKSPQCSNPGLCVQPHHIGVTIKELDLYLAYFVHTPESGQSDSSNQQGDADIKPLPN 207
+ K + KE +L+L Y TP + ++ S Q+ + + +
Sbjct: 362 LLVLKLEEAE---------------KEAELHLTYLKSTPPTLETVRSKQEWETRLNGVRI 406
Query: 208 GHLSFQDCFVT--SGVWNVTELVRVSQTPVATASGP----NFSLADLE-SPSY-----YN 255
+ +D F + V N +L + Q P T P +F L + SPS ++
Sbjct: 407 MKKNVRDQFNSHIQLVRNGAKLSSLPQIPTPTLPPPPSETDFMLQVFQPSPSLAPRMPFS 466
Query: 256 INQVTLGRRSITSPPSTST--TKRPKSIDDSEMESPVDDVFYPGT-GR-SPAAGSSQSSG 311
I QVT+ ++ P + + P S+ SP+ PG+ GR SP GS S
Sbjct: 467 IGQVTMPMVMPSADPRSLSFPILNPALSQPSQPSSPL-----PGSHGRNSPGLGSLVSPH 521
Query: 312 WPN 314
P+
Sbjct: 522 GPH 524
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.133 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,518,188
Number of Sequences: 37866
Number of extensions: 965046
Number of successful extensions: 3802
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 70
Number of HSP's that attempted gapping in prelim test: 3699
Number of HSP's gapped (non-prelim): 140
length of query: 441
length of database: 18,247,518
effective HSP length: 105
effective length of query: 336
effective length of database: 14,271,588
effective search space: 4795253568
effective search space used: 4795253568
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.