Guide to the Human Genome
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Name: ARPP-21 Sequence: fasta or formatted (812aa) NCBI GI: 38261971
Description:

cyclic AMP-regulated phosphoprotein, 21 kD isoform 1

Not currently referenced in the text

Other entries for this name:
alt prot {89aa} cyclic AMP-regulated phosphoprotein, 21 kD isoform 2
alt prot {89aa} cyclic AMP-regulated phosphoprotein, 21 kD isoform 2
alt prot {89aa} cyclic AMP-regulated phosphoprotein, 21 kD isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.7         38           2
 C cysteine            1.2         10           1
 D aspartate           3.9         32           2
 E glutamate           6.2         50           3
 F phenylalanine       2.2         18           1
 G glycine             7.3         59           2
 H histidine           1.5         12           1
 I isoleucine          3.7         30           2
 K lysine              4.4         36           2
 L leucine             6.2         50           2
 M methionine          2.7         22           1
 N asparagine          4.4         36           3
 P proline             9.1         74           3
 Q glutamine          11.2         91           3
 R arginine            5.3         43           2
 S serine             12.8        104           4
 T threonine           5.5         45           2
 V valine              4.6         37           1
 W tryptophan          0.4          3           1
 Y tyrosine            2.7         22           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cyclic AMP-regulated phosphoprotein, 21 kD isoform 1... 
R3HDM1                0.443   R3H domain containing 1 
R3HDM2                0.324   R3H domain containing 2 
ARPP-21               0.090   cyclic AMP-regulated phosphoprotein, 21 kD isoform 2...
ARPP-21               0.090   cyclic AMP-regulated phosphoprotein, 21 kD isoform 2...
ARPP-21               0.090   cyclic AMP-regulated phosphoprotein, 21 kD isoform 2...
ARID1A                0.034   AT rich interactive domain 1A isoform a 
ARID1A                0.034   AT rich interactive domain 1A isoform b 
ATN1                  0.027   atrophin-1 
ATN1                  0.027   atrophin-1 
RERE                  0.027   atrophin-1 like protein isoform b 
RERE                  0.027   atrophin-1 like protein isoform a 
RERE                  0.027   atrophin-1 like protein isoform a 
EP300                 0.025   E1A binding protein p300 
PCLO                  0.024   piccolo isoform 2 
PCLO                  0.024   piccolo isoform 1 
EP400                 0.024   E1A binding protein p400 
MED15                 0.023   mediator complex subunit 15 isoform a 
SFPQ                  0.022   splicing factor proline/glutamine rich (polypyrimidin...
SYN1                  0.022   synapsin I isoform Ia 
SYN1                  0.022   synapsin I isoform Ib 
MED15                 0.022   mediator complex subunit 15 isoform b 
BPTF                  0.021   bromodomain PHD finger transcription factor isoform ...
MYST3                 0.021   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.021   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.021   MYST histone acetyltransferase (monocytic leukemia)...
NCOA6                 0.021   nuclear receptor coactivator 6 
FLJ22184              0.021   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.021   PREDICTED: hypothetical protein LOC80164 
POU6F2                0.021   POU domain, class 6, transcription factor 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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