NFIA 25333

Name: NFIA	Sequence: fasta or formatted (498aa)		NCBI GI: 30840980
Description: nuclear factor I/A isoform 2		Referenced in: RNA Polymerase and General Transcription Factors
Other entries for this name: alt prot [509aa] nuclear factor I/A isoform 1 alt prot [501aa] nuclear factor I/A isoform 3 alt prot [554aa] nuclear factor I/A isoform 4
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.2 26 2 C cysteine 1.4 7 2 D aspartate 4.4 22 1 E glutamate 5.6 28 3 F phenylalanine 4.2 21 1 G glycine 6.2 31 2 H histidine 3.4 17 2 I isoleucine 2.8 14 2 K lysine 6.0 30 2 L leucine 7.8 39 2 M methionine 2.0 10 1 N asparagine 1.6 8 1 P proline 12.7 63 7 Q glutamine 4.8 24 2 R arginine 4.8 24 2 S serine 11.8 59 3 T threonine 6.0 30 2 V valine 6.0 30 1 W tryptophan 0.8 4 1 Y tyrosine 2.2 11 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 nuclear factor I/A isoform 2 NFIA 0.947 nuclear factor I/A isoform 4 NFIA 0.947 nuclear factor I/A isoform 1 NFIA 0.928 nuclear factor I/A isoform 3 NFIX 0.576 nuclear factor I/X (CCAAT-binding transcription fact... NFIC 0.512 nuclear factor I/C isoform 2 NFIC 0.486 nuclear factor I/C isoform 1 NFIB 0.476 nuclear factor I/B POLR2A 0.034 DNA-directed RNA polymerase II A FLJ22184 0.032 PREDICTED: hypothetical protein FLJ22184 FLJ22184 0.028 PREDICTED: hypothetical protein LOC80164 WASF1 0.027 Wiskott-Aldrich syndrome protein family member 1 [Ho... WASF1 0.027 Wiskott-Aldrich syndrome protein family member 1 [Ho... WASF1 0.027 Wiskott-Aldrich syndrome protein family member 1 [Ho... WASF1 0.027 Wiskott-Aldrich syndrome protein family member 1 [Hom... WIPF1 0.027 WAS/WASL interacting protein family, member 1 [Homo... WIPF1 0.027 WAS/WASL interacting protein family, member 1 LOC284297 0.025 hypothetical protein LOC284297 EP300 0.024 E1A binding protein p300 RBM33 0.024 RNA binding motif protein 33 RERE 0.024 atrophin-1 like protein isoform b RERE 0.024 atrophin-1 like protein isoform a RERE 0.024 atrophin-1 like protein isoform a CRTC1 0.023 mucoepidermoid carcinoma translocated 1 isoform 3 [... CRTC1 0.023 mucoepidermoid carcinoma translocated 1 isoform 1 [... SEC16A 0.023 SEC16 homolog A RAPH1 0.023 Ras association and pleckstrin homology domains 1 is... FLJ22184 0.022 PREDICTED: hypothetical protein FLJ22184 IQSEC2 0.022 IQ motif and Sec7 domain 2 isoform1 SF1 0.022 splicing factor 1 isoform 3 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.