NFIC 29808

Name: NFIC	Sequence: fasta or formatted (499aa)		NCBI GI: 45505151
Description: nuclear factor I/C isoform 2		Referenced in: RNA Polymerase and General Transcription Factors
Other entries for this name: alt prot [428aa] nuclear factor I/C isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.4 32 2 C cysteine 1.4 7 1 D aspartate 5.6 28 1 E glutamate 5.0 25 2 F phenylalanine 3.4 17 1 G glycine 6.8 34 2 H histidine 3.2 16 2 I isoleucine 3.0 15 1 K lysine 5.8 29 2 L leucine 8.8 44 2 M methionine 2.0 10 1 N asparagine 1.8 9 1 P proline 10.4 52 4 Q glutamine 4.2 21 2 R arginine 5.8 29 2 S serine 11.2 56 3 T threonine 6.4 32 2 V valine 5.2 26 2 W tryptophan 1.0 5 1 Y tyrosine 2.4 12 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 nuclear factor I/C isoform 2 NFIC 0.821 nuclear factor I/C isoform 1 NFIA 0.553 nuclear factor I/A isoform 3 NFIA 0.551 nuclear factor I/A isoform 4 NFIA 0.551 nuclear factor I/A isoform 1 NFIA 0.514 nuclear factor I/A isoform 2 NFIB 0.478 nuclear factor I/B NFIX 0.436 nuclear factor I/X (CCAAT-binding transcription fact... POLR2A 0.040 DNA-directed RNA polymerase II A MUC2 0.026 mucin 2 precursor INF2 0.025 inverted formin 2 isoform 2 INF2 0.025 inverted formin 2 isoform 1 RERE 0.023 atrophin-1 like protein isoform b RERE 0.023 atrophin-1 like protein isoform a RERE 0.023 atrophin-1 like protein isoform a KLHL29 0.022 PREDICTED: kelch-like 29 (Drosophila) KLHL29 0.022 PREDICTED: kelch-like 29 (Drosophila) KLHL29 0.022 PREDICTED: kelch repeat and BTB (POZ) domain contai... FLJ22184 0.022 PREDICTED: hypothetical protein FLJ22184 MUC7 0.019 mucin 7, secreted precursor MUC7 0.019 mucin 7, secreted precursor MUC7 0.019 mucin 7, secreted precursor NACA 0.019 nascent polypeptide-associated complex alpha subuni... CASKIN1 0.019 CASK interacting protein 1 PRG4 0.019 proteoglycan 4 isoform D PRG4 0.019 proteoglycan 4 isoform C PRG4 0.019 proteoglycan 4 isoform B PRG4 0.019 proteoglycan 4 isoform A WIPF1 0.018 WAS/WASL interacting protein family, member 1 [Homo... WIPF1 0.018 WAS/WASL interacting protein family, member 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.