NFIX 33091

Name: NFIX	Sequence: fasta or formatted (441aa)		NCBI GI: 56549649
Description: nuclear factor I/X (CCAAT-binding transcription factor)		Referenced in: RNA Polymerase and General Transcription Factors
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.9 26 2 C cysteine 2.0 9 2 D aspartate 5.9 26 2 E glutamate 4.3 19 2 F phenylalanine 4.5 20 1 G glycine 6.3 28 1 H histidine 3.6 16 4 I isoleucine 3.9 17 2 K lysine 6.1 27 2 L leucine 8.2 36 2 M methionine 1.1 5 1 N asparagine 2.3 10 1 P proline 8.6 38 2 Q glutamine 5.2 23 2 R arginine 5.4 24 2 S serine 11.3 50 2 T threonine 5.9 26 2 V valine 5.4 24 1 W tryptophan 1.1 5 1 Y tyrosine 2.7 12 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 nuclear factor I/X (CCAAT-binding transcription fact... NFIA 0.653 nuclear factor I/A isoform 4 NFIA 0.653 nuclear factor I/A isoform 2 NFIA 0.653 nuclear factor I/A isoform 1 NFIA 0.633 nuclear factor I/A isoform 3 NFIC 0.507 nuclear factor I/C isoform 1 NFIB 0.500 nuclear factor I/B NFIC 0.492 nuclear factor I/C isoform 2 ATN1 0.015 atrophin-1 ATN1 0.015 atrophin-1 HUWE1 0.011 HECT, UBA and WWE domain containing 1 SH3KBP1 0.011 SH3-domain kinase binding protein 1 isoform b SH3KBP1 0.011 SH3-domain kinase binding protein 1 isoform a ZYX 0.011 zyxin ZYX 0.011 zyxin TRIOBP 0.011 TRIO and F-actin binding protein isoform 6 LOC100132635 0.010 PREDICTED: similar to mucin 5, partial MUC17 0.009 mucin 17 LOC651856 0.008 PREDICTED: similar to hCG2023245 ATXN2 0.008 ataxin 2 LOC100133714 0.008 PREDICTED: similar to Mucin-12, partial ARPP-21 0.008 cyclic AMP-regulated phosphoprotein, 21 kD isoform 1... GATA2 0.007 GATA binding protein 2 isoform 1 GATA2 0.007 GATA binding protein 2 isoform 1 GATA2 0.007 GATA binding protein 2 isoform 2 MUC12 0.007 PREDICTED: mucin 12 NKX6-1 0.007 NK6 transcription factor related, locus 1 MCTP1 0.007 multiple C2 domains, transmembrane 1 isoform L [Hom... RNF214 0.007 ring finger protein 214 RNF214 0.007 ring finger protein 214 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.