Search of human proteins with 13435137

Search of human proteins with 13435137

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|13435137 sperm protein associated with the nucleus, X
chromosome, family member C [Homo sapiens]
         (97 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|13435137 sperm protein associated with the nucleus, X chromos...   196   3e-51
gi|14192937 sperm protein associated with the nucleus, X chromos...   189   4e-49
gi|22027489 sperm protein associated with the nucleus, X chromos...   189   4e-49
gi|22027496 SPANX family, member E [Homo sapiens]                     181   1e-46
gi|14192939 SPANX family, member D [Homo sapiens]                     177   2e-45
gi|190570192 SPANX family, member F1 [Homo sapiens]                   162   7e-41
gi|14196344 SPANX family, member B1 [Homo sapiens]                    160   2e-40
gi|22027492 sperm protein associated with the nucleus, X chromos...   160   2e-40
gi|57634514 SPANX-N2 protein [Homo sapiens]                            65   2e-11
gi|57528121 SPANX-N1 protein [Homo sapiens]                            65   2e-11
gi|58801563 SPANX-N3 protein [Homo sapiens]                            62   8e-11
gi|57528144 SPANX family, member N5 [Homo sapiens]                     62   1e-10
gi|115430231 REC8 homolog [Homo sapiens]                               32   0.11 
gi|115430229 REC8 homolog [Homo sapiens]                               32   0.11 
gi|229892308 shugoshin-like 2 isoform 2 [Homo sapiens]                 31   0.19 
gi|229892306 shugoshin-like 2 isoform 1 [Homo sapiens]                 31   0.19 
gi|229892197 shugoshin-like 2 isoform 3 [Homo sapiens]                 31   0.19 
gi|15149465 caldesmon 1 isoform 5 [Homo sapiens]                       30   0.41 
gi|15149463 caldesmon 1 isoform 4 [Homo sapiens]                       30   0.41 
gi|15149467 caldesmon 1 isoform 3 [Homo sapiens]                       30   0.41 
gi|4826657 caldesmon 1 isoform 2 [Homo sapiens]                        30   0.41 
gi|44680105 caldesmon 1 isoform 1 [Homo sapiens]                       30   0.41 
gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo s...    28   1.2  
gi|116256464 hypothetical protein LOC343990 [Homo sapiens]             28   1.2  
gi|47578107 delangin isoform B [Homo sapiens]                          28   1.2  
gi|47578105 delangin isoform A [Homo sapiens]                          28   1.2  
gi|189181750 human immunodeficiency virus type I enhancer bindin...    28   1.6  
gi|116089331 human immunodeficiency virus type I enhancer bindin...    28   1.6  
gi|222352122 hypothetical protein LOC284297 [Homo sapiens]             28   2.1  
gi|10835063 nucleophosmin 1 isoform 1 [Homo sapiens]                   28   2.1  

>gi|13435137 sperm protein associated with the nucleus, X
          chromosome, family member C [Homo sapiens]
          Length = 97

 Score =  196 bits (498), Expect = 3e-51
 Identities = 97/97 (100%), Positives = 97/97 (100%)

Query: 1  MDKQSSAGGVKRSVPCESNEVNETMPETPTGDSDPQPAPKKMKTSESSTILVVRYRRNVK 60
          MDKQSSAGGVKRSVPCESNEVNETMPETPTGDSDPQPAPKKMKTSESSTILVVRYRRNVK
Sbjct: 1  MDKQSSAGGVKRSVPCESNEVNETMPETPTGDSDPQPAPKKMKTSESSTILVVRYRRNVK 60

Query: 61 RTSPEELLNDHARENRINPLQMEEEEFMEIMVEIPAK 97
          RTSPEELLNDHARENRINPLQMEEEEFMEIMVEIPAK
Sbjct: 61 RTSPEELLNDHARENRINPLQMEEEEFMEIMVEIPAK 97


>gi|14192937 sperm protein associated with the nucleus, X
          chromosome, family member A1 [Homo sapiens]
          Length = 97

 Score =  189 bits (480), Expect = 4e-49
 Identities = 93/97 (95%), Positives = 94/97 (96%)

Query: 1  MDKQSSAGGVKRSVPCESNEVNETMPETPTGDSDPQPAPKKMKTSESSTILVVRYRRNVK 60
          MDKQSSAGGVKRSVPC+SNE NE MPETPTGDSDPQPAPKKMKTSESSTILVVRYRRN K
Sbjct: 1  MDKQSSAGGVKRSVPCDSNEANEMMPETPTGDSDPQPAPKKMKTSESSTILVVRYRRNFK 60

Query: 61 RTSPEELLNDHARENRINPLQMEEEEFMEIMVEIPAK 97
          RTSPEELLNDHARENRINPLQMEEEEFMEIMVEIPAK
Sbjct: 61 RTSPEELLNDHARENRINPLQMEEEEFMEIMVEIPAK 97


>gi|22027489 sperm protein associated with the nucleus, X
          chromosome, family member A2 [Homo sapiens]
          Length = 97

 Score =  189 bits (480), Expect = 4e-49
 Identities = 93/97 (95%), Positives = 94/97 (96%)

Query: 1  MDKQSSAGGVKRSVPCESNEVNETMPETPTGDSDPQPAPKKMKTSESSTILVVRYRRNVK 60
          MDKQSSAGGVKRSVPC+SNE NE MPETPTGDSDPQPAPKKMKTSESSTILVVRYRRN K
Sbjct: 1  MDKQSSAGGVKRSVPCDSNEANEMMPETPTGDSDPQPAPKKMKTSESSTILVVRYRRNFK 60

Query: 61 RTSPEELLNDHARENRINPLQMEEEEFMEIMVEIPAK 97
          RTSPEELLNDHARENRINPLQMEEEEFMEIMVEIPAK
Sbjct: 61 RTSPEELLNDHARENRINPLQMEEEEFMEIMVEIPAK 97


>gi|22027496 SPANX family, member E [Homo sapiens]
          Length = 97

 Score =  181 bits (458), Expect = 1e-46
 Identities = 89/97 (91%), Positives = 93/97 (95%)

Query: 1  MDKQSSAGGVKRSVPCESNEVNETMPETPTGDSDPQPAPKKMKTSESSTILVVRYRRNVK 60
          MDKQSSAGGVKRSVPC+SNE NE MPET +G SDPQPAPKK+KTSESSTILVVRYRRNVK
Sbjct: 1  MDKQSSAGGVKRSVPCDSNEANEMMPETSSGYSDPQPAPKKLKTSESSTILVVRYRRNVK 60

Query: 61 RTSPEELLNDHARENRINPLQMEEEEFMEIMVEIPAK 97
          RTSPEEL+NDHARENRINPLQMEEEEFMEIMVEIPAK
Sbjct: 61 RTSPEELVNDHARENRINPLQMEEEEFMEIMVEIPAK 97


>gi|14192939 SPANX family, member D [Homo sapiens]
          Length = 97

 Score =  177 bits (449), Expect = 2e-45
 Identities = 87/97 (89%), Positives = 92/97 (94%)

Query: 1  MDKQSSAGGVKRSVPCESNEVNETMPETPTGDSDPQPAPKKMKTSESSTILVVRYRRNVK 60
          MDKQSSAGGVKRSVPC+SNE NE MPET +G SDPQPAPKK+KTSESSTILVVRYRRN K
Sbjct: 1  MDKQSSAGGVKRSVPCDSNEANEMMPETSSGYSDPQPAPKKLKTSESSTILVVRYRRNFK 60

Query: 61 RTSPEELLNDHARENRINPLQMEEEEFMEIMVEIPAK 97
          RTSPEEL+NDHAR+NRINPLQMEEEEFMEIMVEIPAK
Sbjct: 61 RTSPEELVNDHARKNRINPLQMEEEEFMEIMVEIPAK 97


>gi|190570192 SPANX family, member F1 [Homo sapiens]
          Length = 103

 Score =  162 bits (409), Expect = 7e-41
 Identities = 84/103 (81%), Positives = 87/103 (84%), Gaps = 6/103 (5%)

Query: 1   MDKQSSAGGVKRSVPCESNEVNE------TMPETPTGDSDPQPAPKKMKTSESSTILVVR 54
           M +QSS   +KRSVPCESNE NE      TMPETPTGDSDPQPAPKKMKTSESSTILVVR
Sbjct: 1   MGQQSSVRRLKRSVPCESNEANEANEANKTMPETPTGDSDPQPAPKKMKTSESSTILVVR 60

Query: 55  YRRNVKRTSPEELLNDHARENRINPLQMEEEEFMEIMVEIPAK 97
           YRRNVKRTSPEELLNDHARENRINP QMEEEEF+EI  E P K
Sbjct: 61  YRRNVKRTSPEELLNDHARENRINPDQMEEEEFIEITTERPKK 103


>gi|14196344 SPANX family, member B1 [Homo sapiens]
          Length = 103

 Score =  160 bits (406), Expect = 2e-40
 Identities = 83/103 (80%), Positives = 87/103 (84%), Gaps = 6/103 (5%)

Query: 1   MDKQSSAGGVKRSVPCESNEVNE------TMPETPTGDSDPQPAPKKMKTSESSTILVVR 54
           M +QSS   +KRSVPCESNE NE      TMPETPTGDSDPQPAPKKMKTSESSTILVVR
Sbjct: 1   MGQQSSVRRLKRSVPCESNEANEANEANKTMPETPTGDSDPQPAPKKMKTSESSTILVVR 60

Query: 55  YRRNVKRTSPEELLNDHARENRINPLQMEEEEFMEIMVEIPAK 97
           YRRNVKRTSPEEL+NDHARENRINP QMEEEEF+EI  E P K
Sbjct: 61  YRRNVKRTSPEELVNDHARENRINPDQMEEEEFIEITTERPKK 103


>gi|22027492 sperm protein associated with the nucleus, X
           chromosome, family member B2 [Homo sapiens]
          Length = 103

 Score =  160 bits (406), Expect = 2e-40
 Identities = 83/103 (80%), Positives = 87/103 (84%), Gaps = 6/103 (5%)

Query: 1   MDKQSSAGGVKRSVPCESNEVNE------TMPETPTGDSDPQPAPKKMKTSESSTILVVR 54
           M +QSS   +KRSVPCESNE NE      TMPETPTGDSDPQPAPKKMKTSESSTILVVR
Sbjct: 1   MGQQSSVRRLKRSVPCESNEANEANEANKTMPETPTGDSDPQPAPKKMKTSESSTILVVR 60

Query: 55  YRRNVKRTSPEELLNDHARENRINPLQMEEEEFMEIMVEIPAK 97
           YRRNVKRTSPEEL+NDHARENRINP QMEEEEF+EI  E P K
Sbjct: 61  YRRNVKRTSPEELVNDHARENRINPDQMEEEEFIEITTERPKK 103


>gi|57634514 SPANX-N2 protein [Homo sapiens]
          Length = 180

 Score = 64.7 bits (156), Expect = 2e-11
 Identities = 38/86 (44%), Positives = 52/86 (60%), Gaps = 2/86 (2%)

Query: 5  SSAGGVKRSVPCESN-EVNETMPETPTGDSDPQPAPKKMKTSESSTILVVRYRRNVKRTS 63
          SS  G KR  PCESN + N+ M E P     P+ + +K KT E  TI+V  YR++ K  S
Sbjct: 6  SSTNGEKRKSPCESNNKKNDEMQEAPNRVLAPKQSLQKTKTIEYLTIIVYYYRKHTKINS 65

Query: 64 PEELLNDHARENRINPLQMEEEEFME 89
            +L  D +REN INP+Q EE+E ++
Sbjct: 66 -NQLEKDQSRENSINPVQEEEDEGLD 90


>gi|57528121 SPANX-N1 protein [Homo sapiens]
          Length = 72

 Score = 64.7 bits (156), Expect = 2e-11
 Identities = 34/68 (50%), Positives = 42/68 (61%), Gaps = 1/68 (1%)

Query: 5  SSAGGVKRSVPCESNEVNETMPETPTGDSDPQPAPKKMKTSESSTILVVRYRRNVKRTSP 64
          SS  G KR  PCESN  N+ M ETP  D  P+P+ KKMKTSE ST+L   YR+  K+   
Sbjct: 6  SSINGEKRKSPCESNNENDEMQETPNRDLAPEPSLKKMKTSEYSTVLAFCYRK-AKKIHS 64

Query: 65 EELLNDHA 72
           +L ND +
Sbjct: 65 NQLENDQS 72


>gi|58801563 SPANX-N3 protein [Homo sapiens]
          Length = 141

 Score = 62.4 bits (150), Expect = 8e-11
 Identities = 36/87 (41%), Positives = 52/87 (59%), Gaps = 2/87 (2%)

Query: 5  SSAGGVKRSVPCESN-EVNETMPETPTGDSDPQPAPKKMKTSESSTILVVRYRRNVKRTS 63
          SS  G K   PCESN + N+ M E P     P+ + KK KTSE   I+ V Y R  K+ +
Sbjct: 6  SSTNGEKTKSPCESNNKKNDEMQEVPNRVLAPEQSLKKTKTSEYP-IIFVYYLRKGKKIN 64

Query: 64 PEELLNDHARENRINPLQMEEEEFMEI 90
            +L N+ ++EN INP+Q EE+E +++
Sbjct: 65 SNQLENEQSQENSINPIQKEEDEGVDL 91


>gi|57528144 SPANX family, member N5 [Homo sapiens]
          Length = 72

 Score = 62.0 bits (149), Expect = 1e-10
 Identities = 33/68 (48%), Positives = 43/68 (63%), Gaps = 1/68 (1%)

Query: 5  SSAGGVKRSVPCESNEVNETMPETPTGDSDPQPAPKKMKTSESSTILVVRYRRNVKRTSP 64
          SS  G KR  PC+SN  N+ M ETP  D   +P+ KKMKTSE ST+LV+ YR+  K+   
Sbjct: 6  SSTNGEKRKSPCDSNSKNDEMQETPNRDLVLEPSLKKMKTSEYSTVLVLCYRK-TKKIHS 64

Query: 65 EELLNDHA 72
           +L ND +
Sbjct: 65 NQLENDQS 72


>gi|115430231 REC8 homolog [Homo sapiens]
          Length = 547

 Score = 32.0 bits (71), Expect = 0.11
 Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 4/75 (5%)

Query: 21  VNETMPETPTGDSDPQPAPKKMKTSESSTILVVRYRRNVKRTSPEELLNDHARENRINPL 80
           V E  PE PT   +P+  P  +   E+ TIL     R ++     EL     RE  ++ L
Sbjct: 167 VEEIPPEVPTEPREPERIPVTVLPPEAITILEAEPIRMLEIEGERELPEVSRRE--LDLL 224

Query: 81  QMEEEEFMEIMVEIP 95
             EEEE   I++EIP
Sbjct: 225 IAEEEE--AILLEIP 237


>gi|115430229 REC8 homolog [Homo sapiens]
          Length = 547

 Score = 32.0 bits (71), Expect = 0.11
 Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 4/75 (5%)

Query: 21  VNETMPETPTGDSDPQPAPKKMKTSESSTILVVRYRRNVKRTSPEELLNDHARENRINPL 80
           V E  PE PT   +P+  P  +   E+ TIL     R ++     EL     RE  ++ L
Sbjct: 167 VEEIPPEVPTEPREPERIPVTVLPPEAITILEAEPIRMLEIEGERELPEVSRRE--LDLL 224

Query: 81  QMEEEEFMEIMVEIP 95
             EEEE   I++EIP
Sbjct: 225 IAEEEE--AILLEIP 237


>gi|229892308 shugoshin-like 2 isoform 2 [Homo sapiens]
          Length = 1260

 Score = 31.2 bits (69), Expect = 0.19
 Identities = 18/87 (20%), Positives = 40/87 (45%), Gaps = 23/87 (26%)

Query: 11  KRSVPCESNEVNETMPETPTGDSDPQPAPKKMKTSESSTILVVRYRRNVKRTSPEELLND 70
           K  + C++N  ++T+P+ P+  S  QP    + T ++S +L +                 
Sbjct: 171 KEKMQCDNNIKSKTLPDIPSSGSTTQP----LSTQDNSEVLFL----------------- 209

Query: 71  HARENRINPLQMEEEEFMEIMVEIPAK 97
             +EN  N   +++ E +  +V++P +
Sbjct: 210 --KENNQNVYGLDDSEHISSIVDVPPR 234


>gi|229892306 shugoshin-like 2 isoform 1 [Homo sapiens]
          Length = 1265

 Score = 31.2 bits (69), Expect = 0.19
 Identities = 18/87 (20%), Positives = 40/87 (45%), Gaps = 23/87 (26%)

Query: 11  KRSVPCESNEVNETMPETPTGDSDPQPAPKKMKTSESSTILVVRYRRNVKRTSPEELLND 70
           K  + C++N  ++T+P+ P+  S  QP    + T ++S +L +                 
Sbjct: 171 KEKMQCDNNIKSKTLPDIPSSGSTTQP----LSTQDNSEVLFL----------------- 209

Query: 71  HARENRINPLQMEEEEFMEIMVEIPAK 97
             +EN  N   +++ E +  +V++P +
Sbjct: 210 --KENNQNVYGLDDSEHISSIVDVPPR 234


>gi|229892197 shugoshin-like 2 isoform 3 [Homo sapiens]
          Length = 1261

 Score = 31.2 bits (69), Expect = 0.19
 Identities = 18/87 (20%), Positives = 40/87 (45%), Gaps = 23/87 (26%)

Query: 11  KRSVPCESNEVNETMPETPTGDSDPQPAPKKMKTSESSTILVVRYRRNVKRTSPEELLND 70
           K  + C++N  ++T+P+ P+  S  QP    + T ++S +L +                 
Sbjct: 171 KEKMQCDNNIKSKTLPDIPSSGSTTQP----LSTQDNSEVLFL----------------- 209

Query: 71  HARENRINPLQMEEEEFMEIMVEIPAK 97
             +EN  N   +++ E +  +V++P +
Sbjct: 210 --KENNQNVYGLDDSEHISSIVDVPPR 234


>gi|15149465 caldesmon 1 isoform 5 [Homo sapiens]
          Length = 532

 Score = 30.0 bits (66), Expect = 0.41
 Identities = 15/51 (29%), Positives = 30/51 (58%), Gaps = 1/51 (1%)

Query: 18  SNEVNETMPETPTGDSDPQPAPKKMKTSESSTILVVRYRRNV-KRTSPEEL 67
           S+ +NE + +TP G+  P P P  ++  + S+   +  +++V K TSP ++
Sbjct: 482 SSRINEWLTKTPDGNKSPAPKPSDLRPGDVSSKRNLWEKQSVDKVTSPTKV 532


>gi|15149463 caldesmon 1 isoform 4 [Homo sapiens]
          Length = 558

 Score = 30.0 bits (66), Expect = 0.41
 Identities = 15/51 (29%), Positives = 30/51 (58%), Gaps = 1/51 (1%)

Query: 18  SNEVNETMPETPTGDSDPQPAPKKMKTSESSTILVVRYRRNV-KRTSPEEL 67
           S+ +NE + +TP G+  P P P  ++  + S+   +  +++V K TSP ++
Sbjct: 508 SSRINEWLTKTPDGNKSPAPKPSDLRPGDVSSKRNLWEKQSVDKVTSPTKV 558


>gi|15149467 caldesmon 1 isoform 3 [Homo sapiens]
          Length = 564

 Score = 30.0 bits (66), Expect = 0.41
 Identities = 15/51 (29%), Positives = 30/51 (58%), Gaps = 1/51 (1%)

Query: 18  SNEVNETMPETPTGDSDPQPAPKKMKTSESSTILVVRYRRNV-KRTSPEEL 67
           S+ +NE + +TP G+  P P P  ++  + S+   +  +++V K TSP ++
Sbjct: 514 SSRINEWLTKTPDGNKSPAPKPSDLRPGDVSSKRNLWEKQSVDKVTSPTKV 564


>gi|4826657 caldesmon 1 isoform 2 [Homo sapiens]
          Length = 538

 Score = 30.0 bits (66), Expect = 0.41
 Identities = 15/51 (29%), Positives = 30/51 (58%), Gaps = 1/51 (1%)

Query: 18  SNEVNETMPETPTGDSDPQPAPKKMKTSESSTILVVRYRRNV-KRTSPEEL 67
           S+ +NE + +TP G+  P P P  ++  + S+   +  +++V K TSP ++
Sbjct: 488 SSRINEWLTKTPDGNKSPAPKPSDLRPGDVSSKRNLWEKQSVDKVTSPTKV 538


>gi|44680105 caldesmon 1 isoform 1 [Homo sapiens]
          Length = 793

 Score = 30.0 bits (66), Expect = 0.41
 Identities = 15/51 (29%), Positives = 30/51 (58%), Gaps = 1/51 (1%)

Query: 18  SNEVNETMPETPTGDSDPQPAPKKMKTSESSTILVVRYRRNV-KRTSPEEL 67
           S+ +NE + +TP G+  P P P  ++  + S+   +  +++V K TSP ++
Sbjct: 743 SSRINEWLTKTPDGNKSPAPKPSDLRPGDVSSKRNLWEKQSVDKVTSPTKV 793


>gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo
            sapiens]
          Length = 4911

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 21/94 (22%), Positives = 45/94 (47%), Gaps = 19/94 (20%)

Query: 3    KQSSAGGVKRSVPCESNEVNETMPETPTGDSDPQPAPKKMKTSESSTILVVRYRR---NV 59
            ++ S+G +   +PC  +  +E +P+T   +S        +  +ES+  +  RYR+    +
Sbjct: 1304 RKDSSGSISEQLPCRDDGWSEQLPDTLVDES--------VSVTESTEKIKKRYRKRKNKL 1355

Query: 60   KRTSPEEL--------LNDHARENRINPLQMEEE 85
            + T P  L        L D +R+++I+   + E+
Sbjct: 1356 EETFPAYLQEAFFGKDLLDTSRQSKISLDNLSED 1389


>gi|116256464 hypothetical protein LOC343990 [Homo sapiens]
          Length = 962

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 13/42 (30%), Positives = 21/42 (50%)

Query: 5   SSAGGVKRSVPCESNEVNETMPETPTGDSDPQPAPKKMKTSE 46
           S+  G +RSVP E+      +P+   G   P P P++   +E
Sbjct: 426 SARDGPERSVPKEAEPTPPVLPDEEKGPPGPAPEPEREAETE 467


>gi|47578107 delangin isoform B [Homo sapiens]
          Length = 2697

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 13/25 (52%), Positives = 16/25 (64%)

Query: 23  ETMPETPTGDSDPQPAPKKMKTSES 47
           E  PETP   SDP+ +  +MK SES
Sbjct: 594 ENHPETPKKKSDPELSKSEMKQSES 618


>gi|47578105 delangin isoform A [Homo sapiens]
          Length = 2804

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 13/25 (52%), Positives = 16/25 (64%)

Query: 23  ETMPETPTGDSDPQPAPKKMKTSES 47
           E  PETP   SDP+ +  +MK SES
Sbjct: 594 ENHPETPKKKSDPELSKSEMKQSES 618


>gi|189181750 human immunodeficiency virus type I enhancer binding
            protein 3 b [Homo sapiens]
          Length = 2405

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 19/71 (26%), Positives = 27/71 (38%)

Query: 6    SAGGVKRSVPCESNEVNETMPETPTGDSDPQPAPKKMKTSESSTILVVRYRRNVKRTSPE 65
            S  G  RS   E ++  +    +P+ D  P+P    M T  S        RR+    SP 
Sbjct: 939  SLSGSSRSASFERDDHGKAEAPSPSSDMRPKPLGTHMLTVPSHHPHAREMRRSASEQSPN 998

Query: 66   ELLNDHARENR 76
               + H  E R
Sbjct: 999  VSHSAHMTETR 1009


>gi|116089331 human immunodeficiency virus type I enhancer binding
            protein 3 [Homo sapiens]
          Length = 2406

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 19/71 (26%), Positives = 27/71 (38%)

Query: 6    SAGGVKRSVPCESNEVNETMPETPTGDSDPQPAPKKMKTSESSTILVVRYRRNVKRTSPE 65
            S  G  RS   E ++  +    +P+ D  P+P    M T  S        RR+    SP 
Sbjct: 939  SLSGSSRSASFERDDHGKAEAPSPSSDMRPKPLGTHMLTVPSHHPHAREMRRSASEQSPN 998

Query: 66   ELLNDHARENR 76
               + H  E R
Sbjct: 999  VSHSAHMTETR 1009


>gi|222352122 hypothetical protein LOC284297 [Homo sapiens]
          Length = 1573

 Score = 27.7 bits (60), Expect = 2.1
 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)

Query: 12  RSVPCESNEVNETMPE-TPTGDSDPQPAPKKMKTSESSTILV 52
           +S+P  S E +  +PE +P    DP P+P    T ES    V
Sbjct: 731 KSIPQASLEPSAEIPEGSPESPKDPAPSPSVSTTGESGLFRV 772


>gi|10835063 nucleophosmin 1 isoform 1 [Homo sapiens]
          Length = 294

 Score = 27.7 bits (60), Expect = 2.1
 Identities = 22/75 (29%), Positives = 31/75 (41%), Gaps = 7/75 (9%)

Query: 3   KQSSAGGVKRSVPCESNEVNETMPETPTGDSDPQPAPKKMKTS-ESSTIL------VVRY 55
           K S      RS   ES +  E  P+TP G S  +    KM+ S E    L       + Y
Sbjct: 212 KDSKPSSTPRSKGQESFKKQEKTPKTPKGPSSVEDIKAKMQASIEKGGSLPKVEAKFINY 271

Query: 56  RRNVKRTSPEELLND 70
            +N  R + +E + D
Sbjct: 272 VKNCFRMTDQEAIQD 286


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.306    0.123    0.336 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,090,219
Number of Sequences: 37866
Number of extensions: 174030
Number of successful extensions: 627
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 495
Number of HSP's gapped (non-prelim): 141
length of query: 97
length of database: 18,247,518
effective HSP length: 68
effective length of query: 29
effective length of database: 15,672,630
effective search space: 454506270
effective search space used: 454506270
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (22.0 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.