Guide to the Human Genome
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Name: SGOL2 Sequence: fasta or formatted (1265aa) NCBI GI: 229892306
Description:

shugoshin-like 2 isoform 1

Not currently referenced in the text

Other entries for this name:
alt prot {1261aa} shugoshin-like 2 isoform 3
alt prot {1260aa} shugoshin-like 2 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.7         34           1
 C cysteine            1.6         20           1
 D aspartate           6.6         84           2
 E glutamate           9.1        115           2
 F phenylalanine       2.9         37           3
 G glycine             3.0         38           1
 H histidine           2.1         26           1
 I isoleucine          5.4         68           2
 K lysine             11.9        151           3
 L leucine             7.7         98           2
 M methionine          2.1         27           1
 N asparagine          9.1        115           3
 P proline             3.1         39           2
 Q glutamine           5.2         66           2
 R arginine            4.2         53           4
 S serine             10.6        134           3
 T threonine           6.0         76           3
 V valine              4.8         61           2
 W tryptophan          0.2          3           1
 Y tyrosine            1.6         20           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   shugoshin-like 2 isoform 1 
SGOL2                 0.996   shugoshin-like 2 isoform 3 
SGOL2                 0.956   shugoshin-like 2 isoform 2 
EEA1                  0.020   early endosome antigen 1, 162kD 
CCDC88A               0.018   coiled-coil domain containing 88A isoform 1 
CENPE                 0.018   centromere protein E 
CCDC88A               0.017   coiled-coil domain containing 88A isoform 2 
ANKRD12               0.017   ankyrin repeat domain 12 isoform 2 
ANKRD12               0.017   ankyrin repeat domain 12 isoform 1 
GOLGA4                0.015   golgi autoantigen, golgin subfamily a, 4 
BOD1L                 0.015   biorientation of chromosomes in cell division 1-like...
ANKRD26               0.015   ankyrin repeat domain 26 
SMC4                  0.014   SMC4 structural maintenance of chromosomes 4-like 1 ...
SMC4                  0.014   SMC4 structural maintenance of chromosomes 4-like 1 ...
UACA                  0.014   uveal autoantigen with coiled-coil domains and ankyr...
UACA                  0.014   uveal autoantigen with coiled-coil domains and ankyr...
ROCK1                 0.013   Rho-associated, coiled-coil containing protein kinase...
CLIP1                 0.013   restin isoform b 
CLIP1                 0.013   restin isoform a 
GCC2                  0.012   GRIP and coiled-coil domain-containing 2 
RB1CC1                0.012   Rb1-inducible coiled coil protein 1 isoform 2 [Homo...
RB1CC1                0.012   Rb1-inducible coiled coil protein 1 isoform 1 [Homo...
KIF15                 0.012   kinesin family member 15 
AKAP9                 0.012   A-kinase anchor protein 9 isoform 3 
AKAP9                 0.011   A-kinase anchor protein 9 isoform 2 
KIF20B                0.011   M-phase phosphoprotein 1 
CCDC46                0.011   coiled-coil domain containing 46 isoform a 
CEP290                0.010   centrosomal protein 290kDa 
CCDC144A              0.010   coiled-coil domain containing 144A 
CCDC18                0.010   sarcoma antigen NY-SAR-41 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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