Guide to the Human Genome
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Name: TMEM214 Sequence: fasta or formatted (644aa) NCBI GI: 134152683
Description:

transmembrane protein 214 isoform 2

Not currently referenced in the text

Other entries for this name:
alt prot {689aa} transmembrane protein 214 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.3         47           1
 C cysteine            2.2         14           1
 D aspartate           3.0         19           1
 E glutamate           4.3         28           2
 F phenylalanine       3.3         21           2
 G glycine             6.2         40           3
 H histidine           3.0         19           1
 I isoleucine          2.6         17           1
 K lysine              6.1         39           2
 L leucine            16.9        109           6
 M methionine          1.6         10           1
 N asparagine          3.1         20           2
 P proline             6.1         39           3
 Q glutamine           6.8         44           2
 R arginine            4.5         29           2
 S serine              8.4         54           2
 T threonine           5.3         34           2
 V valine              4.5         29           2
 W tryptophan          2.8         18           1
 Y tyrosine            2.2         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transmembrane protein 214 isoform 2 
TMEM214               0.984   transmembrane protein 214 isoform 1 
LOC440563             0.006   heterogeneous nuclear ribonucleoprotein C-like [Hom...
MELK                  0.006   maternal embryonic leucine zipper kinase 
IRS4                  0.006   insulin receptor substrate 4 
ALS2                  0.006   alsin isoform 1 
CAND1                 0.006   TIP120 protein 
LRRC4B                0.006   leucine rich repeat containing 4B 
COLEC11               0.005   collectin sub-family member 11 isoform b 
HNRNPCL1              0.005   heterogeneous nuclear ribonucleoprotein C-like 1 [Ho...
RAPGEF1               0.005   guanine nucleotide-releasing factor 2 isoform b [Hom...
RAPGEF1               0.005   guanine nucleotide-releasing factor 2 isoform a [Hom...
UGT2B4                0.005   UDP glucuronosyltransferase 2B4 
FUBP1                 0.005   far upstream element-binding protein 
SBF1                  0.005   SET binding factor 1 
PRKCA                 0.005   protein kinase C, alpha 
SERPINF1              0.005   serine (or cysteine) proteinase inhibitor, clade F (...
CIITA                 0.005   class II transactivator 
PLEKHG6               0.005   pleckstrin homology domain-containing family G memb...
PLEKHG6               0.005   pleckstrin homology domain-containing family G memb...
PLEKHG6               0.005   pleckstrin homology domain-containing family G memb...
GNL3                  0.005   guanine nucleotide binding protein-like 3 isoform 2 ...
GNL3                  0.005   guanine nucleotide binding protein-like 3 isoform 2 ...
GNL3                  0.005   guanine nucleotide binding protein-like 3 isoform 1 ...
MLLT6                 0.005   myeloid/lymphoid or mixed-lineage leukemia (trithora...
STMN4                 0.005   stathmin-like 4 
NFRKB                 0.004   nuclear factor related to kappaB binding protein is...
NFRKB                 0.004   nuclear factor related to kappaB binding protein iso...
PAIP1                 0.004   poly(A) binding protein interacting protein 1 isofor...
ZNF142                0.004   zinc finger protein 142 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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