Guide to the Human Genome
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Name: MLLT6 Sequence: fasta or formatted (1093aa) NCBI GI: 57222568
Description:

myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6

Referenced in:

PHD Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.9        108           8
 C cysteine            2.4         26           2
 D aspartate           2.1         23           1
 E glutamate           4.8         52           3
 F phenylalanine       2.4         26           1
 G glycine            11.1        121           6
 H histidine           2.7         29           2
 I isoleucine          1.6         17           1
 K lysine              4.8         53           2
 L leucine            10.0        109           2
 M methionine          1.8         20           1
 N asparagine          2.2         24           2
 P proline            10.0        109           3
 Q glutamine           5.6         61           3
 R arginine            3.7         40           2
 S serine             14.6        160          11
 T threonine           5.3         58           3
 V valine              3.8         41           2
 W tryptophan          0.3          3           1
 Y tyrosine            1.2         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   myeloid/lymphoid or mixed-lineage leukemia (trithora... 
MLLT10                0.298   myeloid/lymphoid or mixed-lineage leukemia transloca...
MLLT10                0.295   myeloid/lymphoid or mixed-lineage leukemia translocat...
BRPF1                 0.068   bromodomain and PHD finger-containing protein 1 isof...
BRPF1                 0.068   bromodomain and PHD finger-containing protein 1 isof...
BRPF3                 0.065   bromodomain and PHD finger containing, 3 
BRD1                  0.062   bromodomain containing protein 1 
PHF17                 0.054   PHD finger protein 17 short isoform 
PHF17                 0.054   PHD finger protein 17 long isoform 
PHF15                 0.052   PHD finger protein 15 
PHF16                 0.052   PHD finger protein 16 
PHF16                 0.052   PHD finger protein 16 
PHF14                 0.050   PHD finger protein 14 isoform 2 
PHF14                 0.050   PHD finger protein 14 isoform 1 
KDM4B                 0.038   jumonji domain containing 2B 
KDM4C                 0.036   jumonji domain containing 2C isoform 2 
KDM4C                 0.036   jumonji domain containing 2C isoform 1 
KDM4A                 0.035   jumonji domain containing 2A 
MED1                  0.024   mediator complex subunit 1 
ATN1                  0.023   atrophin-1 
ATN1                  0.023   atrophin-1 
MUC6                  0.022   mucin 6, gastric 
KDM4C                 0.020   jumonji domain containing 2C isoform 3 
KDM4C                 0.020   jumonji domain containing 2C isoform 4 
TNRC18                0.019   trinucleotide repeat containing 18 
MUC12                 0.018   PREDICTED: mucin 12 
NACA                  0.018   nascent polypeptide-associated complex alpha subuni...
MUC12                 0.018   PREDICTED: mucin 12 
HRNR                  0.017   hornerin 
ZFHX3                 0.017   AT-binding transcription factor 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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