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Search of human proteins with 55953112
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|55953112 ret finger protein 2 isoform 2 [Homo sapiens]
(410 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|55953112 ret finger protein 2 isoform 2 [Homo sapiens] 839 0.0
gi|47132524 ret finger protein 2 isoform 1 [Homo sapiens] 833 0.0
gi|16445412 ret finger protein 2 isoform 1 [Homo sapiens] 833 0.0
gi|47132521 ret finger protein 2 isoform 1 [Homo sapiens] 833 0.0
gi|27436877 tripartite motif-containing 59 [Homo sapiens] 209 5e-54
gi|14670266 tripartite motif protein TRIM4 isoform alpha [Homo s... 100 3e-21
gi|19924163 muscle specific ring finger protein 1 [Homo sapiens] 99 5e-21
gi|15011941 tripartite motif protein TRIM4 isoform beta [Homo sa... 97 2e-20
gi|30023818 tripartite motif protein 50A [Homo sapiens] 97 3e-20
gi|78482626 ring finger protein 30 isoform 2 [Homo sapiens] 94 2e-19
gi|37622899 ring finger protein 137 [Homo sapiens] 94 3e-19
gi|34878844 tripartite motif-containing 55 isoform 3 [Homo sapiens] 93 5e-19
gi|34878836 tripartite motif-containing 55 isoform 1 [Homo sapiens] 93 5e-19
gi|34878821 tripartite motif-containing 55 isoform 2 [Homo sapiens] 93 5e-19
gi|217035095 tripartite motif-containing 62 [Homo sapiens] 92 1e-18
gi|56605981 tripartite motif-containing 72 [Homo sapiens] 88 1e-17
gi|65285121 tripartite motif-containing 73 [Homo sapiens] 88 2e-17
gi|38524612 tripartite motif-containing 74 [Homo sapiens] 87 3e-17
gi|21630277 tripartite motif-containing 11 [Homo sapiens] 86 5e-17
gi|25777698 tripartite motif-containing 39 isoform 2 [Homo sapiens] 86 6e-17
gi|25777696 tripartite motif-containing 39 isoform 1 [Homo sapiens] 86 6e-17
gi|22749269 ring finger protein 129 [Homo sapiens] 86 8e-17
gi|78482627 ring finger protein 30 isoform 1 [Homo sapiens] 86 8e-17
gi|117938316 tripartite motif-containing 22 [Homo sapiens] 84 2e-16
gi|51477687 tripartite motif protein 34 isoform 1 [Homo sapiens] 83 5e-16
gi|18087807 tripartite motif protein 34 isoform 1 [Homo sapiens] 83 5e-16
gi|51477690 tripartite motif-containing 6 and tripartite motif-c... 83 5e-16
gi|62865604 tripartite motif protein 31 [Homo sapiens] 82 7e-16
gi|32454739 tripartite motif-containing 3 [Homo sapiens] 82 7e-16
gi|32454737 tripartite motif-containing 3 [Homo sapiens] 82 7e-16
>gi|55953112 ret finger protein 2 isoform 2 [Homo sapiens]
Length = 410
Score = 839 bits (2167), Expect = 0.0
Identities = 410/410 (100%), Positives = 410/410 (100%)
Query: 1 MDVMELLEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTC 60
MDVMELLEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTC
Sbjct: 1 MDVMELLEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTC 60
Query: 61 RKETSATGINSLQVNYSLKGIVEKYNKIKISPKMPVCKGHLGQPLNIFCLTDMQLICGIC 120
RKETSATGINSLQVNYSLKGIVEKYNKIKISPKMPVCKGHLGQPLNIFCLTDMQLICGIC
Sbjct: 61 RKETSATGINSLQVNYSLKGIVEKYNKIKISPKMPVCKGHLGQPLNIFCLTDMQLICGIC 120
Query: 121 ATRGEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLTK 180
ATRGEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLTK
Sbjct: 121 ATRGEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLTK 180
Query: 181 DSDKVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKLNTILQEQRMAFNIAE 240
DSDKVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKLNTILQEQRMAFNIAE
Sbjct: 181 DSDKVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKLNTILQEQRMAFNIAE 240
Query: 241 AFKDVSEPIVFLQQMQEFREKIKVIKETPLPPSNLPASPLMKNFDTSQWEDIKLVDVDKL 300
AFKDVSEPIVFLQQMQEFREKIKVIKETPLPPSNLPASPLMKNFDTSQWEDIKLVDVDKL
Sbjct: 241 AFKDVSEPIVFLQQMQEFREKIKVIKETPLPPSNLPASPLMKNFDTSQWEDIKLVDVDKL 300
Query: 301 SLPQDTGTFISKIPWSFYKLFLLILLLGLVIVFGPTMFLEWSLFDDLATWKGCLSNFSSY 360
SLPQDTGTFISKIPWSFYKLFLLILLLGLVIVFGPTMFLEWSLFDDLATWKGCLSNFSSY
Sbjct: 301 SLPQDTGTFISKIPWSFYKLFLLILLLGLVIVFGPTMFLEWSLFDDLATWKGCLSNFSSY 360
Query: 361 LTKTADFIEQSVFYWEQVTDGFFIFNERFKNFTLVVLNNVAEFVCKYKLL 410
LTKTADFIEQSVFYWEQVTDGFFIFNERFKNFTLVVLNNVAEFVCKYKLL
Sbjct: 361 LTKTADFIEQSVFYWEQVTDGFFIFNERFKNFTLVVLNNVAEFVCKYKLL 410
>gi|47132524 ret finger protein 2 isoform 1 [Homo sapiens]
Length = 407
Score = 833 bits (2152), Expect = 0.0
Identities = 407/407 (100%), Positives = 407/407 (100%)
Query: 4 MELLEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKE 63
MELLEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKE
Sbjct: 1 MELLEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKE 60
Query: 64 TSATGINSLQVNYSLKGIVEKYNKIKISPKMPVCKGHLGQPLNIFCLTDMQLICGICATR 123
TSATGINSLQVNYSLKGIVEKYNKIKISPKMPVCKGHLGQPLNIFCLTDMQLICGICATR
Sbjct: 61 TSATGINSLQVNYSLKGIVEKYNKIKISPKMPVCKGHLGQPLNIFCLTDMQLICGICATR 120
Query: 124 GEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLTKDSD 183
GEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLTKDSD
Sbjct: 121 GEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLTKDSD 180
Query: 184 KVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKLNTILQEQRMAFNIAEAFK 243
KVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKLNTILQEQRMAFNIAEAFK
Sbjct: 181 KVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKLNTILQEQRMAFNIAEAFK 240
Query: 244 DVSEPIVFLQQMQEFREKIKVIKETPLPPSNLPASPLMKNFDTSQWEDIKLVDVDKLSLP 303
DVSEPIVFLQQMQEFREKIKVIKETPLPPSNLPASPLMKNFDTSQWEDIKLVDVDKLSLP
Sbjct: 241 DVSEPIVFLQQMQEFREKIKVIKETPLPPSNLPASPLMKNFDTSQWEDIKLVDVDKLSLP 300
Query: 304 QDTGTFISKIPWSFYKLFLLILLLGLVIVFGPTMFLEWSLFDDLATWKGCLSNFSSYLTK 363
QDTGTFISKIPWSFYKLFLLILLLGLVIVFGPTMFLEWSLFDDLATWKGCLSNFSSYLTK
Sbjct: 301 QDTGTFISKIPWSFYKLFLLILLLGLVIVFGPTMFLEWSLFDDLATWKGCLSNFSSYLTK 360
Query: 364 TADFIEQSVFYWEQVTDGFFIFNERFKNFTLVVLNNVAEFVCKYKLL 410
TADFIEQSVFYWEQVTDGFFIFNERFKNFTLVVLNNVAEFVCKYKLL
Sbjct: 361 TADFIEQSVFYWEQVTDGFFIFNERFKNFTLVVLNNVAEFVCKYKLL 407
>gi|16445412 ret finger protein 2 isoform 1 [Homo sapiens]
Length = 407
Score = 833 bits (2152), Expect = 0.0
Identities = 407/407 (100%), Positives = 407/407 (100%)
Query: 4 MELLEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKE 63
MELLEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKE
Sbjct: 1 MELLEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKE 60
Query: 64 TSATGINSLQVNYSLKGIVEKYNKIKISPKMPVCKGHLGQPLNIFCLTDMQLICGICATR 123
TSATGINSLQVNYSLKGIVEKYNKIKISPKMPVCKGHLGQPLNIFCLTDMQLICGICATR
Sbjct: 61 TSATGINSLQVNYSLKGIVEKYNKIKISPKMPVCKGHLGQPLNIFCLTDMQLICGICATR 120
Query: 124 GEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLTKDSD 183
GEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLTKDSD
Sbjct: 121 GEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLTKDSD 180
Query: 184 KVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKLNTILQEQRMAFNIAEAFK 243
KVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKLNTILQEQRMAFNIAEAFK
Sbjct: 181 KVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKLNTILQEQRMAFNIAEAFK 240
Query: 244 DVSEPIVFLQQMQEFREKIKVIKETPLPPSNLPASPLMKNFDTSQWEDIKLVDVDKLSLP 303
DVSEPIVFLQQMQEFREKIKVIKETPLPPSNLPASPLMKNFDTSQWEDIKLVDVDKLSLP
Sbjct: 241 DVSEPIVFLQQMQEFREKIKVIKETPLPPSNLPASPLMKNFDTSQWEDIKLVDVDKLSLP 300
Query: 304 QDTGTFISKIPWSFYKLFLLILLLGLVIVFGPTMFLEWSLFDDLATWKGCLSNFSSYLTK 363
QDTGTFISKIPWSFYKLFLLILLLGLVIVFGPTMFLEWSLFDDLATWKGCLSNFSSYLTK
Sbjct: 301 QDTGTFISKIPWSFYKLFLLILLLGLVIVFGPTMFLEWSLFDDLATWKGCLSNFSSYLTK 360
Query: 364 TADFIEQSVFYWEQVTDGFFIFNERFKNFTLVVLNNVAEFVCKYKLL 410
TADFIEQSVFYWEQVTDGFFIFNERFKNFTLVVLNNVAEFVCKYKLL
Sbjct: 361 TADFIEQSVFYWEQVTDGFFIFNERFKNFTLVVLNNVAEFVCKYKLL 407
>gi|47132521 ret finger protein 2 isoform 1 [Homo sapiens]
Length = 407
Score = 833 bits (2152), Expect = 0.0
Identities = 407/407 (100%), Positives = 407/407 (100%)
Query: 4 MELLEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKE 63
MELLEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKE
Sbjct: 1 MELLEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKE 60
Query: 64 TSATGINSLQVNYSLKGIVEKYNKIKISPKMPVCKGHLGQPLNIFCLTDMQLICGICATR 123
TSATGINSLQVNYSLKGIVEKYNKIKISPKMPVCKGHLGQPLNIFCLTDMQLICGICATR
Sbjct: 61 TSATGINSLQVNYSLKGIVEKYNKIKISPKMPVCKGHLGQPLNIFCLTDMQLICGICATR 120
Query: 124 GEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLTKDSD 183
GEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLTKDSD
Sbjct: 121 GEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLTKDSD 180
Query: 184 KVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKLNTILQEQRMAFNIAEAFK 243
KVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKLNTILQEQRMAFNIAEAFK
Sbjct: 181 KVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKLNTILQEQRMAFNIAEAFK 240
Query: 244 DVSEPIVFLQQMQEFREKIKVIKETPLPPSNLPASPLMKNFDTSQWEDIKLVDVDKLSLP 303
DVSEPIVFLQQMQEFREKIKVIKETPLPPSNLPASPLMKNFDTSQWEDIKLVDVDKLSLP
Sbjct: 241 DVSEPIVFLQQMQEFREKIKVIKETPLPPSNLPASPLMKNFDTSQWEDIKLVDVDKLSLP 300
Query: 304 QDTGTFISKIPWSFYKLFLLILLLGLVIVFGPTMFLEWSLFDDLATWKGCLSNFSSYLTK 363
QDTGTFISKIPWSFYKLFLLILLLGLVIVFGPTMFLEWSLFDDLATWKGCLSNFSSYLTK
Sbjct: 301 QDTGTFISKIPWSFYKLFLLILLLGLVIVFGPTMFLEWSLFDDLATWKGCLSNFSSYLTK 360
Query: 364 TADFIEQSVFYWEQVTDGFFIFNERFKNFTLVVLNNVAEFVCKYKLL 410
TADFIEQSVFYWEQVTDGFFIFNERFKNFTLVVLNNVAEFVCKYKLL
Sbjct: 361 TADFIEQSVFYWEQVTDGFFIFNERFKNFTLVVLNNVAEFVCKYKLL 407
>gi|27436877 tripartite motif-containing 59 [Homo sapiens]
Length = 403
Score = 209 bits (531), Expect = 5e-54
Identities = 105/306 (34%), Positives = 174/306 (56%), Gaps = 7/306 (2%)
Query: 4 MELLEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPA--PFKCPTCR 61
M EE+LTCPIC S+F+DPRVLPCSH FC+ CLE IL+ S +WRP P KCP CR
Sbjct: 1 MHNFEEELTCPICYSIFEDPRVLPCSHTFCRNCLENILQASGNFYIWRPLRIPLKCPNCR 60
Query: 62 K--ETSATGINSLQVNYSLKGIVEKYNKIKISPKMPVCKGHLGQPLNIFCLTDMQLICGI 119
E + TGI SL VN++L+ I+EKY + + P + C H QPLN++CL D +L+CG
Sbjct: 61 SITEIAPTGIESLPVNFALRAIIEKYQQ-EDHPDIVTCPEHYRQPLNVYCLLDKKLVCGH 119
Query: 120 CATRGEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLT 179
C T G+H H ++ AY +E+D + L + D ++ L+ K S +++
Sbjct: 120 CLTIGQHHGHPIDDLQSAYLKEKDTPQKLLEQLTDTHWTDLTHLIEKLKEQKSHSEKMIQ 179
Query: 180 KDSDKVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKLNTILQEQRMAFNIA 239
D + V ++F++L TL+QKK L+ + + Q Y P+I ++ I ++Q +
Sbjct: 180 GDKEAVLQYFKELNDTLEQKKKSFLTALCDVGNLINQEYTPQIERMKEIREQQLELMALT 239
Query: 240 EAFKDVSEPIVFLQQMQEFREKIKVIKETPLPP-SNLPASPLMKNFDTSQWEDIKLVDVD 298
+ ++ S P+ FL+++ + R+ ++++K+ PLP + P + +W ++ +
Sbjct: 240 ISLQEES-PLKFLEKVDDVRQHVQILKQRPLPEVQPVEIYPRVSKILKEEWSRTEIGQIK 298
Query: 299 KLSLPQ 304
+ +P+
Sbjct: 299 NVLIPK 304
>gi|14670266 tripartite motif protein TRIM4 isoform alpha [Homo
sapiens]
Length = 500
Score = 100 bits (248), Expect = 3e-21
Identities = 68/234 (29%), Positives = 105/234 (44%), Gaps = 22/234 (9%)
Query: 5 ELLEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRP--APFKCPTCRK 62
E ++E+LTCPIC F DP + C HNFC+ CL RN W P PF CP CR
Sbjct: 4 EDIQEELTCPICLDYFQDPVSIECGHNFCRGCLH-------RN--WAPGGGPFPCPECRH 54
Query: 63 ETSATGINSLQVNYSLKGIVEKYNKIKISPKMPVCKGHLGQPLNIFCLTDMQLICGICAT 122
++ +L+ N++L + EK + ++ P P G +PL +FC D + +C +C
Sbjct: 55 PSAPA---ALRPNWALARLTEKTQRRRLGPVPPGLCGRHWEPLRLFCEDDQRPVCLVCRE 111
Query: 123 RGEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLTKDS 182
EH H I++A+ R + + W+R RL L K + L K
Sbjct: 112 SQEHQTHAMAPIDEAFESYRTGNFDI--HVDEWKR-----RLIRLLLYHSKQEEKLLKSQ 164
Query: 183 DKVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKLNTILQEQRMAF 236
+ +K+ H D + + +K M+ E +KL+ L E+ F
Sbjct: 165 RNLVAKMKKVMHLQDVEVKNATQWKDKIKSQRMR-ISTEFSKLHNFLVEEEDLF 217
>gi|19924163 muscle specific ring finger protein 1 [Homo sapiens]
Length = 353
Score = 99.4 bits (246), Expect = 5e-21
Identities = 72/255 (28%), Positives = 117/255 (45%), Gaps = 35/255 (13%)
Query: 4 MELLEEDLTCPICCSLFDDPRV-LPCSHNFCKKCLEGILEGSVRNSLWRP---------A 53
ME LE+ L CPIC +F P V LPC HN C+KC I + + N W
Sbjct: 14 MENLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDIFQAA--NPYWTSRGSSVSMSGG 71
Query: 54 PFKCPTCRKET--SATGINSLQVNYSLKGIVEKYNKIKISPKM-----PVCKGHLGQPLN 106
F+CPTCR E G+ LQ N ++ I++ Y + S + P+CK H + +N
Sbjct: 72 RFRCPTCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSHPMCKEHEDEKIN 131
Query: 107 IFCLTDMQLICGICATRGEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDT 166
I+CLT C +C G H ++ + ++ + R+ T
Sbjct: 132 IYCLTCEVPTCSMCKVFGIHKACEVAPLQSVFQGQKTELNNCISMLVAGN-----DRVQT 186
Query: 167 LETSKRKSLQLLTKDSDKVKE----FFEKLQHTLDQKKNEIL---SDFETMKL----AVM 215
+ T S ++ ++S +VKE F+ L LD+KK+E+L + + KL A++
Sbjct: 187 IITQLEDSRRVTKENSHQVKEELSQKFDTLYAILDEKKSELLQRITQEQEKKLSFIEALI 246
Query: 216 QAYDPEINKLNTILQ 230
Q Y +++K +++
Sbjct: 247 QQYQEQLDKSTKLVE 261
>gi|15011941 tripartite motif protein TRIM4 isoform beta [Homo
sapiens]
Length = 474
Score = 97.4 bits (241), Expect = 2e-20
Identities = 71/263 (26%), Positives = 122/263 (46%), Gaps = 32/263 (12%)
Query: 5 ELLEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRP--APFKCPTCRK 62
E ++E+LTCPIC F DP + C HNFC+ CL RN W P PF CP CR
Sbjct: 4 EDIQEELTCPICLDYFQDPVSIECGHNFCRGCLH-------RN--WAPGGGPFPCPECRH 54
Query: 63 ETSATGINSLQVNYSLKGIVEKYNKIKISPKMPVCKGHLGQPLNIFCLTDMQLICGICAT 122
++ +L+ N++L + EK + ++ P P G +PL +FC D + +C +C
Sbjct: 55 PSAPA---ALRPNWALARLTEKTQRRRLGPVPPGLCGRHWEPLRLFCEDDQRPVCLVCRE 111
Query: 123 RGEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLTKDS 182
EH H I++A+ R E L +S + + ++++ + + ++ T+
Sbjct: 112 SQEHQTHAMAPIDEAFESYR---EKLLKS-----QRNLVAKMKKVMHLQDVEVKNATQWK 163
Query: 183 DKVKE-------FFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKLN-TILQEQRM 234
DK+K F KL + L ++++ L + + + KLN TI +++
Sbjct: 164 DKIKSQRMRISTEFSKLHNFLVEEEDLFLQRLNKEEEETKKKLNENTLKLNQTIASLKKL 223
Query: 235 AFNIAEAFKDVSEPIVFLQQMQE 257
+ E K + + LQ +E
Sbjct: 224 ILEVGE--KSQAPTLELLQNPKE 244
>gi|30023818 tripartite motif protein 50A [Homo sapiens]
Length = 487
Score = 96.7 bits (239), Expect = 3e-20
Identities = 68/276 (24%), Positives = 126/276 (45%), Gaps = 22/276 (7%)
Query: 7 LEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKETSA 66
LE+ L CPIC +F +P +L C H++CK CL V S A +CP CR+ +
Sbjct: 10 LEDWLQCPICLEVFKEPLMLQCGHSYCKGCL-------VSLSCHLDAELRCPVCRQ--AV 60
Query: 67 TGINSLQVNYSLKGIVEKYNKIKISPKMPVCKGHLGQPLNIFCLTDMQLICGICATRGEH 126
G +SL N SL ++E ++ P+ VC H PL++FC D +LICG+C G H
Sbjct: 61 DGSSSLP-NVSLARVIEAL-RLPGDPEPKVCVHH-RNPLSLFCEKDQELICGLCGLLGSH 117
Query: 127 TKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLTKDSD--- 183
H + Y++ ++ +L + ++ ++D L + + +SD
Sbjct: 118 QHHPVTPVSTVYSRMKEELAALISELKQEQK-----KVDELIAKLVNNRTRIVNESDVFS 172
Query: 184 -KVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKLNTILQEQRMAFNIAEAF 242
++ F++L H +D++K L ++ + D ++ + + A + E F
Sbjct: 173 WVIRREFQELHHLVDEEKARCLEGIGGHTRGLVASLDMQLEQAQGTRERLAQAECVLEQF 232
Query: 243 KDVSEPIVFLQQMQEFREKIKVIKETPLPPSNLPAS 278
+ + F+++ + ++ + PL + P S
Sbjct: 233 GN-EDHHKFIRKFHSMASRAEMPQARPLEGAFSPIS 267
>gi|78482626 ring finger protein 30 isoform 2 [Homo sapiens]
Length = 358
Score = 94.0 bits (232), Expect = 2e-19
Identities = 76/314 (24%), Positives = 140/314 (44%), Gaps = 51/314 (16%)
Query: 4 MELLEEDLTCPICCSLFDDPRV-LPCSHNFCKKCLEGILEGSVRNSLWRP---------A 53
M+ LE+ L CPIC +F P V LPC HN C+KC + + S N LW+
Sbjct: 17 MDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQAS--NPLWQSRGSTTVSSGG 74
Query: 54 PFKCPTCRKET--SATGINSLQVNYSLKGIVEKYNKIKISP------KMPVCKGHLGQPL 105
F+CP+CR E G+ LQ N ++ I++ Y + P + +C+ H + +
Sbjct: 75 RFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKAEQHLMCEEHEEEKI 134
Query: 106 NIFCLTDMQLICGICATRGEHTKHVFCSIEDAYAQER----DAFESLFQSFETWRRGDAL 161
NI+CL+ C +C G H + Y +++ D L + R +
Sbjct: 135 NIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAMLVAGND--RVQAVI 192
Query: 162 SRLD----TLETSKRKSLQLLTKDSDKVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQA 217
++++ T+E + R+ QLL + FE L L+++K E+L A+ +
Sbjct: 193 TQMEEVCQTIEDNSRRQKQLL-------NQRFESLCAVLEERKGELLQ-------ALARE 238
Query: 218 YDPEINKLNTILQE-----QRMAFNIAEAFKDVSEP--IVFLQQMQEFREKIKVIKETPL 270
+ ++ ++ ++++ + + + A + + EP ++LQQ +E K+ + + L
Sbjct: 239 QEEKLQRVRGLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELINKVGAMSKVEL 298
Query: 271 PPSNLPASPLMKNF 284
P M+ F
Sbjct: 299 AGRPEPGYESMEQF 312
>gi|37622899 ring finger protein 137 [Homo sapiens]
Length = 485
Score = 93.6 bits (231), Expect = 3e-19
Identities = 76/284 (26%), Positives = 130/284 (45%), Gaps = 41/284 (14%)
Query: 3 VMELLEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRK 62
++E + E++ CPIC + +P + C H+FC CL G+ E + W + CP CR
Sbjct: 6 LVEAIVEEVACPICMTFLREPMSIDCGHSFCHSCLSGLWEIPGESQNW---GYTCPLCRA 62
Query: 63 ETSATGINSLQVNYSLKGIVEKYNKIKISPKM----PVCKGHLGQPLNIFCLTDMQLICG 118
+L+ N+ L +VEK +++ P M +C+ H G+ L +FC D+ ++C
Sbjct: 63 PVQP---RNLRPNWQLANVVEKVRLLRLHPGMGLKGDLCERH-GEKLKMFCKEDVLIMCE 118
Query: 119 ICATRGEHTKHVFCSIED-AYAQERDAFESL----FQSFETWRRGDALSRLDTLETSKRK 173
C+ EH H +ED A+ + + E+L + E W+ LE +RK
Sbjct: 119 ACSQSPEHEAHSVVPMEDVAWEYKWELHEALEHLKKEQEEAWK----------LEVGERK 168
Query: 174 -----SLQLLTKDSDKVKEFFEKLQHTLDQKK-------NEILSDFETMKLAVMQAYDP- 220
+Q+ T+ V E FEK Q L++K+ E+ + +++ +
Sbjct: 169 RTATWKIQVETRKQSIVWE-FEKYQRLLEKKQPPHRQLGAEVAAALASLQREAAETMQKL 227
Query: 221 EINKLNTILQEQRMAFNIAEAFKDVSEPIVF-LQQMQEFREKIK 263
E+N I Q Q + IAE + P+ + LQ +QE + K
Sbjct: 228 ELNHSELIQQSQVLWRMIAELKERSQRPVRWMLQDIQEVLNRSK 271
>gi|34878844 tripartite motif-containing 55 isoform 3 [Homo sapiens]
Length = 452
Score = 92.8 bits (229), Expect = 5e-19
Identities = 74/278 (26%), Positives = 121/278 (43%), Gaps = 25/278 (8%)
Query: 4 MELLEEDLTCPICCSLFDDPRV-LPCSHNFCKKCLEGILEGS-------VRNSLWRPAPF 55
M+ LE+ L CPIC +F P V LPC HN C+KC I + S ++ F
Sbjct: 17 MDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNPYLPTRGGTTMASGGRF 76
Query: 56 KCPTCRKET--SATGINSLQVNYSLKGIVEKYNKIKISPK----MPVCKGHLGQPLNIFC 109
+CP+CR E G+ LQ N ++ I++ Y + P+ P+C+ H + +NI+C
Sbjct: 77 RCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKKSDQPMCEEHEEERINIYC 136
Query: 110 LTDMQLICGICATRGEHTKHVFCSIEDAYAQER----DAFESLFQSFETWRRGDALSRL- 164
L C +C G H + + +++ D L S + R +S+L
Sbjct: 137 LNCEVPTCSLCKVFGAHKDCQVAPLTHVFQRQKSELSDGIAILVGSND--RVQGVISQLE 194
Query: 165 DTLETSKRKSLQLLTKDSDKVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINK 224
DT +T + + K ++ E F+ L L+++KNE+ + ++ I K
Sbjct: 195 DTCKTIE----ECCRKQKQELCEKFDYLYGILEERKNEMTQVITRTQEEKLEHVRALIKK 250
Query: 225 LNTILQEQRMAFNIAEAFKDVSEPIVFLQQMQEFREKI 262
+ L+ F D E VFLQ + +KI
Sbjct: 251 YSDHLENVSKLVESGIQFMDEPEMAVFLQNAKTLLKKI 288
>gi|34878836 tripartite motif-containing 55 isoform 1 [Homo sapiens]
Length = 548
Score = 92.8 bits (229), Expect = 5e-19
Identities = 74/278 (26%), Positives = 121/278 (43%), Gaps = 25/278 (8%)
Query: 4 MELLEEDLTCPICCSLFDDPRV-LPCSHNFCKKCLEGILEGS-------VRNSLWRPAPF 55
M+ LE+ L CPIC +F P V LPC HN C+KC I + S ++ F
Sbjct: 17 MDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNPYLPTRGGTTMASGGRF 76
Query: 56 KCPTCRKET--SATGINSLQVNYSLKGIVEKYNKIKISPK----MPVCKGHLGQPLNIFC 109
+CP+CR E G+ LQ N ++ I++ Y + P+ P+C+ H + +NI+C
Sbjct: 77 RCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKKSDQPMCEEHEEERINIYC 136
Query: 110 LTDMQLICGICATRGEHTKHVFCSIEDAYAQER----DAFESLFQSFETWRRGDALSRL- 164
L C +C G H + + +++ D L S + R +S+L
Sbjct: 137 LNCEVPTCSLCKVFGAHKDCQVAPLTHVFQRQKSELSDGIAILVGSND--RVQGVISQLE 194
Query: 165 DTLETSKRKSLQLLTKDSDKVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINK 224
DT +T + + K ++ E F+ L L+++KNE+ + ++ I K
Sbjct: 195 DTCKTIE----ECCRKQKQELCEKFDYLYGILEERKNEMTQVITRTQEEKLEHVRALIKK 250
Query: 225 LNTILQEQRMAFNIAEAFKDVSEPIVFLQQMQEFREKI 262
+ L+ F D E VFLQ + +KI
Sbjct: 251 YSDHLENVSKLVESGIQFMDEPEMAVFLQNAKTLLKKI 288
>gi|34878821 tripartite motif-containing 55 isoform 2 [Homo sapiens]
Length = 540
Score = 92.8 bits (229), Expect = 5e-19
Identities = 74/278 (26%), Positives = 121/278 (43%), Gaps = 25/278 (8%)
Query: 4 MELLEEDLTCPICCSLFDDPRV-LPCSHNFCKKCLEGILEGS-------VRNSLWRPAPF 55
M+ LE+ L CPIC +F P V LPC HN C+KC I + S ++ F
Sbjct: 17 MDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNPYLPTRGGTTMASGGRF 76
Query: 56 KCPTCRKET--SATGINSLQVNYSLKGIVEKYNKIKISPK----MPVCKGHLGQPLNIFC 109
+CP+CR E G+ LQ N ++ I++ Y + P+ P+C+ H + +NI+C
Sbjct: 77 RCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKKSDQPMCEEHEEERINIYC 136
Query: 110 LTDMQLICGICATRGEHTKHVFCSIEDAYAQER----DAFESLFQSFETWRRGDALSRL- 164
L C +C G H + + +++ D L S + R +S+L
Sbjct: 137 LNCEVPTCSLCKVFGAHKDCQVAPLTHVFQRQKSELSDGIAILVGSND--RVQGVISQLE 194
Query: 165 DTLETSKRKSLQLLTKDSDKVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINK 224
DT +T + + K ++ E F+ L L+++KNE+ + ++ I K
Sbjct: 195 DTCKTIE----ECCRKQKQELCEKFDYLYGILEERKNEMTQVITRTQEEKLEHVRALIKK 250
Query: 225 LNTILQEQRMAFNIAEAFKDVSEPIVFLQQMQEFREKI 262
+ L+ F D E VFLQ + +KI
Sbjct: 251 YSDHLENVSKLVESGIQFMDEPEMAVFLQNAKTLLKKI 288
>gi|217035095 tripartite motif-containing 62 [Homo sapiens]
Length = 475
Score = 91.7 bits (226), Expect = 1e-18
Identities = 81/318 (25%), Positives = 138/318 (43%), Gaps = 35/318 (11%)
Query: 7 LEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKETSA 66
L+++L C IC S++ DP L C H FC++C I E VR CP CR+ +
Sbjct: 5 LKDELLCSICLSIYQDPVSLGCEHYFCRRC---ITEHWVRQE--AQGARDCPECRRTFAE 59
Query: 67 TGINSLQVNYSLKGIVEKYNKIKISPKMPV------CKGHLGQPLNIFCLTDMQLICGIC 120
+L + L IVE+Y+ + + C+ H + +FCLTD L+C C
Sbjct: 60 P---ALAPSLKLANIVERYSSFPLDAILNARRAARPCQAH--DKVKLFCLTDRALLCFFC 114
Query: 121 ATRGEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLTK 180
H +H I+DA+ + + + Q+ + R + L+ KR+ + TK
Sbjct: 115 DEPALHEQHQVTGIDDAFDELQRELKDQLQALQDSER----EHTEALQLLKRQLAE--TK 168
Query: 181 DSDK-----VKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKLNTILQEQRMA 235
S K + E FE+L L +++ +L + E + + ++ + + L++ +
Sbjct: 169 SSTKSLRTTIGEAFERLHRLLRERQKAMLEELEADTARTLTDIEQKVQRYSQQLRKVQEG 228
Query: 236 FNIAEAFKDVSEPIVFLQQMQEFREKIK-VIKETPLPPSNLPAS----PLMKNFDTSQWE 290
I + ++ FL + E++K I ET L + P S PL S ++
Sbjct: 229 AQILQERLAETDRHTFLAGVASLSERLKGKIHETNLTYEDFPTSKYTGPLQYTIWKSLFQ 288
Query: 291 DIKLVDVDKLSLPQDTGT 308
DI V +L D GT
Sbjct: 289 DIHPVPA---ALTLDPGT 303
>gi|56605981 tripartite motif-containing 72 [Homo sapiens]
Length = 477
Score = 88.2 bits (217), Expect = 1e-17
Identities = 71/276 (25%), Positives = 119/276 (43%), Gaps = 27/276 (9%)
Query: 6 LLEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKETS 65
LL ++L+CP+C LFD P C H+FC+ CL G V CP C+ T
Sbjct: 7 LLHQELSCPLCLQLFDAPVTAECGHSFCRACL-----GRVAGEPAADGTVLCPCCQAPTR 61
Query: 66 ATGINSLQVNYSLKGIVEKYNKIKISPKMPVCKGHLGQPLNIFCLTDMQLICGICATRGE 125
+L N L +VE ++ C+ HL PL+I+C D L+CG+CA+ G
Sbjct: 62 P---QALSTNLQLARLVEGLAQV----PQGHCEEHL-DPLSIYCEQDRALVCGVCASLGS 113
Query: 126 HTKHVFCSIEDAYAQERDAF-ESLFQSFETWRRGDAL-----SRLDTLETSKRKSLQLLT 179
H H +A+A+ + + Q E R + +L +E + R+ +
Sbjct: 114 HRGHRLLPAAEAHARLKTQLPQQKLQLQEACMRKEKSVAVLEHQLVEVEETVRQFRGAVG 173
Query: 180 KDSDKVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKLNTILQEQRMAFNIA 239
+ K++ F L+ +LD + E ++ A E+ LN+ L++ R +
Sbjct: 174 EQLGKMRVFLAALEGSLD-------CEAERVRGEAGVALRRELGSLNSYLEQLRQMEKVL 226
Query: 240 EAFKDVSEPIVFLQQMQEFREKIKVIKETPLPPSNL 275
E D + ++ K++ E+P PP+ L
Sbjct: 227 EEVADKPQTEFLMKYCLVTSRLQKILAESP-PPARL 261
>gi|65285121 tripartite motif-containing 73 [Homo sapiens]
Length = 250
Score = 87.8 bits (216), Expect = 2e-17
Identities = 60/240 (25%), Positives = 109/240 (45%), Gaps = 21/240 (8%)
Query: 7 LEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKETSA 66
LE+ L CPIC +F + +L C H++CK CL + S +CP C +
Sbjct: 10 LEDRLQCPICLEVFKESLMLQCGHSYCKGCLVSL-------SYHLDTKVRCPMCWQVVD- 61
Query: 67 TGINSLQVNYSLKGIVEKYNKIKISPKMPVCKGHLGQPLNIFCLTDMQLICGICATRGEH 126
G +SL N SL ++E ++ P+ VC H PL++FC D +LICG+C G H
Sbjct: 62 -GSSSLP-NVSLAWVIEAL-RLPGDPEPKVCVHHRN-PLSLFCEKDQELICGLCGLLGSH 117
Query: 127 TKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLTKDSD--- 183
H + ++ ++ +LF + ++ ++D L K+ + +SD
Sbjct: 118 QHHPVTPVSTVCSRMKEELAALFSELKQEQK-----KVDELIAKLVKNRTRIVNESDVFS 172
Query: 184 -KVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKLNTILQEQRMAFNIAEAF 242
++ F++L+H +D++K L ++ + D ++ + + A + E F
Sbjct: 173 WVIRREFQELRHPVDEEKARCLEGIGGHTRGLVASLDMQLEQAQGTRERLAQAECVLEQF 232
>gi|38524612 tripartite motif-containing 74 [Homo sapiens]
Length = 250
Score = 87.0 bits (214), Expect = 3e-17
Identities = 60/240 (25%), Positives = 109/240 (45%), Gaps = 21/240 (8%)
Query: 7 LEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKETSA 66
LE+ L CPIC +F + +L C H++CK CL + S +CP C +
Sbjct: 10 LEDWLQCPICLEVFKESLMLQCGHSYCKGCLVSL-------SYHLDTKVRCPMCWQVVD- 61
Query: 67 TGINSLQVNYSLKGIVEKYNKIKISPKMPVCKGHLGQPLNIFCLTDMQLICGICATRGEH 126
G +SL N SL ++E ++ P+ VC H PL++FC D +LICG+C G H
Sbjct: 62 -GSSSLP-NVSLAWVIEAL-RLPGDPEPKVCVHHRN-PLSLFCEKDQELICGLCGLLGSH 117
Query: 127 TKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLTKDSD--- 183
H + ++ ++ +LF + ++ ++D L K+ + +SD
Sbjct: 118 QHHPVTPVSTVCSRMKEELAALFSELKQEQK-----KVDELIAKLVKNRTRIVNESDVFS 172
Query: 184 -KVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKLNTILQEQRMAFNIAEAF 242
++ F++L+H +D++K L ++ + D ++ + + A + E F
Sbjct: 173 WVIRREFQELRHPVDEEKARCLEGIGGHTRGLVASLDMQLEQAQGTRERLAQAECVLEQF 232
>gi|21630277 tripartite motif-containing 11 [Homo sapiens]
Length = 468
Score = 86.3 bits (212), Expect = 5e-17
Identities = 70/279 (25%), Positives = 122/279 (43%), Gaps = 21/279 (7%)
Query: 2 DVMELLEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRP-APFKCPTC 60
D+ L+E+ TC IC F DP + C HNFC++C +R +P P+ CP C
Sbjct: 5 DLSTNLQEEATCAICLDYFTDPVMTDCGHNFCREC--------IRRCWGQPEGPYACPEC 56
Query: 61 RKETSATGINSLQVNYSLKGIVEKYNKIKISPKMP--VCKGHLGQPLNIFCLTDMQLICG 118
R+ + +L+ N L + E ++ +P VC H +PL FC +++L+C
Sbjct: 57 RELSPQ---RNLRPNRPLAKMAEMARRLHPPSPVPQGVCPAH-REPLAAFCGDELRLLCA 112
Query: 119 ICATRGEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLL 178
C GEH H ++DA + E + + L + ET +++
Sbjct: 113 ACERSGEHWAHRVRPLQDAAEDLKAKLEKSLEHLRKQMQDALLFQAQADETCVLWQ-KMV 171
Query: 179 TKDSDKVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKLNTILQEQRMAFNI 238
V FE+L+ L +++ ++L E +L V+ L Q +A I
Sbjct: 172 ESQRQNVLGEFERLRRLLAEEEQQLLQRLEEEELEVLPRLREGAAHLGQ--QSAHLAELI 229
Query: 239 AEAFKDVSEPIVFLQQMQEFREKIKVIKETPL-PPSNLP 276
AE P + L +Q+ ++ ++ +++ L PP +P
Sbjct: 230 AELEGRCQLPALGL--LQDIKDALRRVQDVKLQPPEVVP 266
>gi|25777698 tripartite motif-containing 39 isoform 2 [Homo sapiens]
Length = 488
Score = 85.9 bits (211), Expect = 6e-17
Identities = 55/218 (25%), Positives = 102/218 (46%), Gaps = 18/218 (8%)
Query: 4 MELLEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKE 63
+E L+ + +C +C +P ++ C HNFCK C+ E R+ F CP CRK
Sbjct: 20 LENLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERD-------FPCPVCRK- 71
Query: 64 TSATGINSLQVNYSLKGIVEKYNKIKISPKM----PVCKGHLGQPLNIFCLTDMQLICGI 119
+ SL+ N L +VE +++ + +C H + L++FC D + +C I
Sbjct: 72 --TSRYRSLRPNRQLGSMVEIAKQLQAVKRKIRDESLCPQH-HEALSLFCYEDQEAVCLI 128
Query: 120 CATRGEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLT 179
CA H H ++DA + ++ + + E ++ ++R + E K L+ L
Sbjct: 129 CAISHTHRAHTVVPLDDATQEYKEKLQKCLEPLE--QKLQEITRCKSSEEKKPGELKRLV 186
Query: 180 KD-SDKVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQ 216
+ ++ FE+L LD+++ +LS E + ++Q
Sbjct: 187 ESRRQQILREFEELHRRLDEEQQVLLSRLEEEEQDILQ 224
>gi|25777696 tripartite motif-containing 39 isoform 1 [Homo sapiens]
Length = 518
Score = 85.9 bits (211), Expect = 6e-17
Identities = 55/218 (25%), Positives = 102/218 (46%), Gaps = 18/218 (8%)
Query: 4 MELLEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKE 63
+E L+ + +C +C +P ++ C HNFCK C+ E R+ F CP CRK
Sbjct: 20 LENLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERD-------FPCPVCRK- 71
Query: 64 TSATGINSLQVNYSLKGIVEKYNKIKISPKM----PVCKGHLGQPLNIFCLTDMQLICGI 119
+ SL+ N L +VE +++ + +C H + L++FC D + +C I
Sbjct: 72 --TSRYRSLRPNRQLGSMVEIAKQLQAVKRKIRDESLCPQH-HEALSLFCYEDQEAVCLI 128
Query: 120 CATRGEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLT 179
CA H H ++DA + ++ + + E ++ ++R + E K L+ L
Sbjct: 129 CAISHTHRAHTVVPLDDATQEYKEKLQKCLEPLE--QKLQEITRCKSSEEKKPGELKRLV 186
Query: 180 KD-SDKVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQ 216
+ ++ FE+L LD+++ +LS E + ++Q
Sbjct: 187 ESRRQQILREFEELHRRLDEEQQVLLSRLEEEEQDILQ 224
>gi|22749269 ring finger protein 129 [Homo sapiens]
Length = 471
Score = 85.5 bits (210), Expect = 8e-17
Identities = 64/271 (23%), Positives = 120/271 (44%), Gaps = 28/271 (10%)
Query: 7 LEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPA--PFKCPTCRKET 64
L+E+ +CPIC DP + C HNFC+ CL + W+ F CP CR
Sbjct: 10 LQEESSCPICLEYLKDPVTINCGHNFCRSCL---------SVSWKDLDDTFPCPVCR--- 57
Query: 65 SATGINSLQVNYSLKGIVE-------KYNKIKISPKMPVCKGHLGQPLNIFCLTDMQLIC 117
S + N L+ + E + +K K + +C+ H Q L +FC+ D++++C
Sbjct: 58 FCFPYKSFRRNPQLRNLTEIAKQLQIRRSKRKRQKENAMCEKH-NQFLTLFCVKDLEILC 116
Query: 118 GICATRGEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRG-DALSRLDTLETSKRKSLQ 176
C+ +H KH C I+ A + R+ E S E R + + ++ L+ SK L+
Sbjct: 117 TQCSFSTKHQKHYICPIKKAASYHREILEG---SLEPLRNNIERVEKVIILQGSKSVELK 173
Query: 177 LLTK-DSDKVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKLNTILQEQRMA 235
+ +++ FE+++ L ++ IL + ++ ++ + + +L+ + +
Sbjct: 174 KKVEYKREEINSEFEQIRLFLQNEQEMILRQIQDEEMNILAKLNENLVELSDYVSTLKHL 233
Query: 236 FNIAEAFKDVSEPIVFLQQMQEFREKIKVIK 266
E K V + L Q + K + +K
Sbjct: 234 LREVEG-KSVQSNLELLTQAKSMHHKYQNLK 263
>gi|78482627 ring finger protein 30 isoform 1 [Homo sapiens]
Length = 400
Score = 85.5 bits (210), Expect = 8e-17
Identities = 76/347 (21%), Positives = 140/347 (40%), Gaps = 75/347 (21%)
Query: 4 MELLEEDLTCPICCSLFDDPRV-LPCSHNFCKKCLEGILEGSVRNSLWRP---------A 53
M+ LE+ L CPIC +F P V LPC HN C+KC + + S N LW+
Sbjct: 17 MDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQAS--NPLWQSRGSTTVSSGG 74
Query: 54 PFKCPTCRKET--SATGINSLQVNYSLKGIVEKYNKIKISP------KMPVCKGHLGQPL 105
F+CP+CR E G+ LQ N ++ I++ Y + P + +C+ H + +
Sbjct: 75 RFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKAEQHLMCEEHEEEKI 134
Query: 106 NIFCLTDMQLICGICATRGEH------------------------------TKHVFCSIE 135
NI+CL+ C +C G H T +CS++
Sbjct: 135 NIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKKQDLTLLPRLECSGTNTTYCSLD 194
Query: 136 DAYAQERDAFESLFQSFETWRRGDALS-------RLDTLETSKRKSLQLLTKDSDKVKEF 188
+ + S D ++ R+ + T + Q + +S + K+
Sbjct: 195 LPSSSDPPILASQNTKIIDSELSDGIAMLVAGNDRVQAVITQMEEVCQTIEDNSRRQKQL 254
Query: 189 ----FEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKLNTILQE-----QRMAFNIA 239
FE L L+++K E+L A+ + + ++ ++ ++++ + + +
Sbjct: 255 LNQRFESLCAVLEERKGELLQ-------ALAREQEEKLQRVRGLIRQYGDHLEASSKLVE 307
Query: 240 EAFKDVSEP--IVFLQQMQEFREKIKVIKETPLPPSNLPASPLMKNF 284
A + + EP ++LQQ +E K+ + + L P M+ F
Sbjct: 308 SAIQSMEEPQMALYLQQAKELINKVGAMSKVELAGRPEPGYESMEQF 354
>gi|117938316 tripartite motif-containing 22 [Homo sapiens]
Length = 498
Score = 84.0 bits (206), Expect = 2e-16
Identities = 56/213 (26%), Positives = 99/213 (46%), Gaps = 12/213 (5%)
Query: 7 LEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKETSA 66
+E+++TCPIC L +P L C H+FC+ C+ ++ SV S + CP C+
Sbjct: 9 IEKEVTCPICLELLTEPLSLDCGHSFCQACITAKIKESVIISRGESS---CPVCQTRFQP 65
Query: 67 TGINSLQVNYSLKGIVEKYNKIKISP----KMPVCKGHLGQPLNIFCLTDMQLICGICAT 122
+L+ N L IVE+ ++K+SP K VC+ H G+ L IFC D ++IC +C
Sbjct: 66 ---GNLRPNRHLANIVERVKEVKMSPQEGQKRDVCEHH-GKKLQIFCKEDGKVICWVCEL 121
Query: 123 RGEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLTKDS 182
EH H I + + ++ + Q +A D + + + +
Sbjct: 122 SQEHQGHQTFRINEVVKECQEKLQVALQRL-IKEDQEAEKLEDDIRQERTAWKNYIQIER 180
Query: 183 DKVKEFFEKLQHTLDQKKNEILSDFETMKLAVM 215
K+ + F +++ LD ++ L E ++ V+
Sbjct: 181 QKILKGFNEMRVILDNEEQRELQKLEEGEVNVL 213
>gi|51477687 tripartite motif protein 34 isoform 1 [Homo sapiens]
Length = 488
Score = 82.8 bits (203), Expect = 5e-16
Identities = 78/337 (23%), Positives = 146/337 (43%), Gaps = 40/337 (11%)
Query: 7 LEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKETSA 66
++E++TCPIC L +P L C H+ C+ C+ + +V + + + CP C S
Sbjct: 9 VQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSS---CPVCGISYS- 64
Query: 67 TGINSLQVNYSLKGIVEKYNKIKISP----KMPVCKGHLGQPLNIFCLTDMQLICGICAT 122
LQ N L IVE+ ++K+SP K +C H G+ L +FC D ++IC +C
Sbjct: 65 --FEHLQANQHLANIVERLKEVKLSPDNGKKRDLCDHH-GEKLLLFCKEDRKVICWLCER 121
Query: 123 RGEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLTKDS 182
EH H E+ + + ++ +++ + + D E Q+ T +
Sbjct: 122 SQEHRGHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEKTSWKYQVQT-ER 180
Query: 183 DKVKEFFEKLQHTL---DQKKNEILSDFETMKLAVMQAYDPEINKLNTILQEQ------R 233
+++ F++L+ L +Q++ + L + E L + E+ + +++E R
Sbjct: 181 QRIQTEFDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDELVQQKQLVRELISDVECR 240
Query: 234 MAFNIAEAFKDVS-----EPIVFLQQMQEFREKIKVIKETPLPPSNLPASPLMKNFD--- 285
++ E +D+S I L++ + +K+K + P S +++ F
Sbjct: 241 SQWSTMELLQDMSGIMKWSEIWRLKKPKMVSKKLKTVFHAP------DLSRMLQMFRELT 294
Query: 286 --TSQWEDIKLVDVD---KLSLPQDTGTFISKIPWSF 317
W D+ L V+ L L +D IS W F
Sbjct: 295 AVRCYWVDVTLNSVNLNLNLVLSEDQRQVISVPIWPF 331
>gi|18087807 tripartite motif protein 34 isoform 1 [Homo sapiens]
Length = 488
Score = 82.8 bits (203), Expect = 5e-16
Identities = 78/337 (23%), Positives = 146/337 (43%), Gaps = 40/337 (11%)
Query: 7 LEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKETSA 66
++E++TCPIC L +P L C H+ C+ C+ + +V + + + CP C S
Sbjct: 9 VQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSS---CPVCGISYS- 64
Query: 67 TGINSLQVNYSLKGIVEKYNKIKISP----KMPVCKGHLGQPLNIFCLTDMQLICGICAT 122
LQ N L IVE+ ++K+SP K +C H G+ L +FC D ++IC +C
Sbjct: 65 --FEHLQANQHLANIVERLKEVKLSPDNGKKRDLCDHH-GEKLLLFCKEDRKVICWLCER 121
Query: 123 RGEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLTKDS 182
EH H E+ + + ++ +++ + + D E Q+ T +
Sbjct: 122 SQEHRGHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEKTSWKYQVQT-ER 180
Query: 183 DKVKEFFEKLQHTL---DQKKNEILSDFETMKLAVMQAYDPEINKLNTILQEQ------R 233
+++ F++L+ L +Q++ + L + E L + E+ + +++E R
Sbjct: 181 QRIQTEFDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDELVQQKQLVRELISDVECR 240
Query: 234 MAFNIAEAFKDVS-----EPIVFLQQMQEFREKIKVIKETPLPPSNLPASPLMKNFD--- 285
++ E +D+S I L++ + +K+K + P S +++ F
Sbjct: 241 SQWSTMELLQDMSGIMKWSEIWRLKKPKMVSKKLKTVFHAP------DLSRMLQMFRELT 294
Query: 286 --TSQWEDIKLVDVD---KLSLPQDTGTFISKIPWSF 317
W D+ L V+ L L +D IS W F
Sbjct: 295 AVRCYWVDVTLNSVNLNLNLVLSEDQRQVISVPIWPF 331
>gi|51477690 tripartite motif-containing 6 and tripartite
motif-containing 34 [Homo sapiens]
Length = 842
Score = 82.8 bits (203), Expect = 5e-16
Identities = 78/337 (23%), Positives = 146/337 (43%), Gaps = 40/337 (11%)
Query: 7 LEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKETSA 66
++E++TCPIC L +P L C H+ C+ C+ + +V + + + CP C S
Sbjct: 363 VQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSS---CPVCGISYS- 418
Query: 67 TGINSLQVNYSLKGIVEKYNKIKISP----KMPVCKGHLGQPLNIFCLTDMQLICGICAT 122
LQ N L IVE+ ++K+SP K +C H G+ L +FC D ++IC +C
Sbjct: 419 --FEHLQANQHLANIVERLKEVKLSPDNGKKRDLCDHH-GEKLLLFCKEDRKVICWLCER 475
Query: 123 RGEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLTKDS 182
EH H E+ + + ++ +++ + + D E Q+ T +
Sbjct: 476 SQEHRGHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEKTSWKYQVQT-ER 534
Query: 183 DKVKEFFEKLQHTL---DQKKNEILSDFETMKLAVMQAYDPEINKLNTILQEQ------R 233
+++ F++L+ L +Q++ + L + E L + E+ + +++E R
Sbjct: 535 QRIQTEFDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDELVQQKQLVRELISDVECR 594
Query: 234 MAFNIAEAFKDVS-----EPIVFLQQMQEFREKIKVIKETPLPPSNLPASPLMKNFD--- 285
++ E +D+S I L++ + +K+K + P S +++ F
Sbjct: 595 SQWSTMELLQDMSGIMKWSEIWRLKKPKMVSKKLKTVFHAP------DLSRMLQMFRELT 648
Query: 286 --TSQWEDIKLVDVD---KLSLPQDTGTFISKIPWSF 317
W D+ L V+ L L +D IS W F
Sbjct: 649 AVRCYWVDVTLNSVNLNLNLVLSEDQRQVISVPIWPF 685
Score = 75.5 bits (184), Expect = 8e-14
Identities = 56/254 (22%), Positives = 107/254 (42%), Gaps = 21/254 (8%)
Query: 7 LEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKETSA 66
+ E++TCPIC L +P + C H+FC+ C I + + + CP C+
Sbjct: 37 IREEVTCPICLELLTEPLSIDCGHSFCQAC---ITPNGRESVIGQEGERSCPVCQTSYQP 93
Query: 67 TGINSLQVNYSLKGIVEKYNKIKISP----KMPVCKGHLGQPLNIFCLTDMQLICGICAT 122
+L+ N L IV + ++ + P K +C H G+ L +FC D ++IC +C
Sbjct: 94 ---GNLRPNRHLANIVRRLREVVLGPGKQLKAVLCADH-GEKLQLFCQEDGKVICWLCER 149
Query: 123 RGEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLTKDS 182
EH H +E+ + ++ F+ + + +A + K + +
Sbjct: 150 SQEHRGHHTFLVEEVAQEYQEKFQESLKKLKN-EEQEAEKLTAFIREKKTSWKNQMEPER 208
Query: 183 DKVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKLNTILQ---------EQR 233
+++ F +L++ LD+ + L E + ++ + N L Q E+R
Sbjct: 209 CRIQTEFNQLRNILDRVEQRELKKLEQEEKKGLRIIEEAENDLVHQTQSLRELISDLERR 268
Query: 234 MAFNIAEAFKDVSE 247
+ E +DVS+
Sbjct: 269 CQGSTMELLQDVSD 282
>gi|62865604 tripartite motif protein 31 [Homo sapiens]
Length = 425
Score = 82.4 bits (202), Expect = 7e-16
Identities = 54/209 (25%), Positives = 99/209 (47%), Gaps = 35/209 (16%)
Query: 7 LEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKETSA 66
L+E++ CPIC + P + C HNFC KC+ I E S FKCP C+ ++
Sbjct: 10 LQEEVICPICLDILQKPVTIDCGHNFCLKCITQIGETSC-------GFFKCPLCK---TS 59
Query: 67 TGINSLQVNYSLKGIVEKYNKIKISP-----KMPVCKGHLGQPLNIFCLTDMQLICGICA 121
N+++ N L+ +VEK ++ S K C H + + FC D + +C +C
Sbjct: 60 VRKNAIRFNSLLRNLVEKIQALQASEVQSKRKEATCPRH-QEMFHYFCEDDGKFLCFVCR 118
Query: 122 TRGEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLTKD 181
+H H IE+A Q+++ G ++ L+ +++++Q+ +
Sbjct: 119 ESKDHKSHNVSLIEEA-----------AQNYQ----GQIQEQIQVLQQKEKETVQVKAQG 163
Query: 182 SDKVKEFFEKLQHTLDQKKNEILSDFETM 210
+V F ++++H +K IL++FE +
Sbjct: 164 VHRVDVFTDQVEH----EKQRILTEFELL 188
>gi|32454739 tripartite motif-containing 3 [Homo sapiens]
Length = 744
Score = 82.4 bits (202), Expect = 7e-16
Identities = 67/288 (23%), Positives = 124/288 (43%), Gaps = 29/288 (10%)
Query: 2 DVMELLEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCR 61
+V + ++ L C IC + P+VLPC H FC++CL+ + + CP CR
Sbjct: 11 EVQPMDKQFLVCSICLDRYQCPKVLPCLHTFCERCLQNYIPA-------QSLTLSCPVCR 63
Query: 62 KET--SATGINSLQVNYSLKGIVEKYNK-------------IKISPKMPV-CKGHLGQPL 105
+ + G+++LQ N+ + ++E + + + P+ C H G+ +
Sbjct: 64 QTSILPEQGVSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSVVAGRPLSCPNHEGKTM 123
Query: 106 NIFCLTDMQLICGICATRGEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLD 165
+C +CG C GEH +H + D Q + A + ++ R LS
Sbjct: 124 EFYCEACETAMCGECRA-GEHREHGTVLLRDVVEQHKAALQRQLEAVR--GRLPQLSAAI 180
Query: 166 TLETSKRKSLQLLTKDS-DKVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINK 224
L + LQ ++ ++ FE L+ L Q+K ++SD ET+ A + +++
Sbjct: 181 ALVGGISQQLQERKAEALAQISAAFEDLEQALQQRKQALVSDLETICGAKQKVLQSQLDT 240
Query: 225 LNTILQEQRMAFNIAE-AFKDVSEPIVFLQQMQEFREKIKVIKETPLP 271
L + + + AE A + S P V L + + RE++ + P
Sbjct: 241 LRQGQEHIGSSCSFAEQALRLGSAPEVLLVR-KHMRERLAALAAQAFP 287
>gi|32454737 tripartite motif-containing 3 [Homo sapiens]
Length = 744
Score = 82.4 bits (202), Expect = 7e-16
Identities = 67/288 (23%), Positives = 124/288 (43%), Gaps = 29/288 (10%)
Query: 2 DVMELLEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCR 61
+V + ++ L C IC + P+VLPC H FC++CL+ + + CP CR
Sbjct: 11 EVQPMDKQFLVCSICLDRYQCPKVLPCLHTFCERCLQNYIPA-------QSLTLSCPVCR 63
Query: 62 KET--SATGINSLQVNYSLKGIVEKYNK-------------IKISPKMPV-CKGHLGQPL 105
+ + G+++LQ N+ + ++E + + + P+ C H G+ +
Sbjct: 64 QTSILPEQGVSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSVVAGRPLSCPNHEGKTM 123
Query: 106 NIFCLTDMQLICGICATRGEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLD 165
+C +CG C GEH +H + D Q + A + ++ R LS
Sbjct: 124 EFYCEACETAMCGECRA-GEHREHGTVLLRDVVEQHKAALQRQLEAVR--GRLPQLSAAI 180
Query: 166 TLETSKRKSLQLLTKDS-DKVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINK 224
L + LQ ++ ++ FE L+ L Q+K ++SD ET+ A + +++
Sbjct: 181 ALVGGISQQLQERKAEALAQISAAFEDLEQALQQRKQALVSDLETICGAKQKVLQSQLDT 240
Query: 225 LNTILQEQRMAFNIAE-AFKDVSEPIVFLQQMQEFREKIKVIKETPLP 271
L + + + AE A + S P V L + + RE++ + P
Sbjct: 241 LRQGQEHIGSSCSFAEQALRLGSAPEVLLVR-KHMRERLAALAAQAFP 287
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.138 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,513,777
Number of Sequences: 37866
Number of extensions: 691938
Number of successful extensions: 3197
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 204
Number of HSP's successfully gapped in prelim test: 177
Number of HSP's that attempted gapping in prelim test: 2693
Number of HSP's gapped (non-prelim): 489
length of query: 410
length of database: 18,247,518
effective HSP length: 105
effective length of query: 305
effective length of database: 14,271,588
effective search space: 4352834340
effective search space used: 4352834340
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.