Guide to the Human Genome
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Name: AMPD2 Sequence: fasta or formatted (760aa) NCBI GI: 55925574
Description:

adenosine monophosphate deaminase 2 (isoform L) isoform 3

Referenced in:

Purine Biosynthesis and Catabolism

Other entries for this name:
alt prot [879aa] adenosine monophosphate deaminase 2 (isoform L) isoform 1
alt prot [798aa] adenosine monophosphate deaminase 2 (isoform L) isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         42           2
 C cysteine            1.3         10           1
 D aspartate           5.0         38           2
 E glutamate           9.3         71           2
 F phenylalanine       4.5         34           1
 G glycine             3.9         30           1
 H histidine           4.2         32           2
 I isoleucine          3.8         29           2
 K lysine              4.2         32           2
 L leucine            11.6         88           3
 M methionine          3.0         23           1
 N asparagine          3.6         27           2
 P proline             6.2         47           2
 Q glutamine           4.6         35           2
 R arginine            7.1         54           2
 S serine              6.8         52           2
 T threonine           4.1         31           2
 V valine              6.3         48           2
 W tryptophan          0.8          6           1
 Y tyrosine            4.1         31           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   adenosine monophosphate deaminase 2 (isoform L) isof... 
AMPD2                 0.989   adenosine monophosphate deaminase 2 (isoform L) isof...
AMPD2                 0.989   adenosine monophosphate deaminase 2 (isoform L) isof...
AMPD3                 0.494   adenosine monophosphate deaminase 3 isoform 1A 
AMPD3                 0.494   adenosine monophosphate deaminase 3 isoform 1C [Homo...
AMPD3                 0.494   adenosine monophosphate deaminase 3 isoform 1B [Homo...
AMPD1                 0.463   adenosine monophosphate deaminase 1 (isoform M) [Homo...
LIMCH1                0.008   LIM and calponin homology domains 1 isoform d [Homo...
LIMCH1                0.008   LIM and calponin homology domains 1 isoform c [Homo...
LIMCH1                0.008   LIM and calponin homology domains 1 isoform b [Homo...
LIMCH1                0.008   LIM and calponin homology domains 1 isoform a [Homo...
PUS10                 0.007   pseudouridylate synthase 10 
CECR1                 0.007   cat eye syndrome critical region protein 1 isoform b...
CECR1                 0.007   cat eye syndrome critical region protein 1 isoform a...
ZNF853                0.007   zinc finger protein 853 
TCHH                  0.006   trichohyalin 
HOOK1                 0.005   hook homolog 1 
CGN                   0.005   cingulin 
MYH15                 0.005   myosin, heavy polypeptide 15 
NBEA                  0.004   neurobeachin 
LIMCH1                0.004   LIM and calponin homology domains 1 isoform e [Homo...
CEP250                0.004   centrosomal protein 2 
NEK4                  0.004   NIMA-related kinase 4 
CUL1                  0.004   cullin 1 
C15orf42              0.004   leucine-rich repeat kinase 1 
MFAP1                 0.004   microfibrillar-associated protein 1 
PRRT3                 0.004   proline-rich transmembrane protein 3 
TNIK                  0.003   TRAF2 and NCK interacting kinase isoform 6 
TNIK                  0.003   TRAF2 and NCK interacting kinase isoform 5 
TNIK                  0.003   TRAF2 and NCK interacting kinase isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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