Guide to the Human Genome
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Name: AMPD2 Sequence: fasta or formatted (879aa) NCBI GI: 21264318
Description:

adenosine monophosphate deaminase 2 (isoform L) isoform 1

Referenced in:

Purine Biosynthesis and Catabolism

Other entries for this name:
alt prot [798aa] adenosine monophosphate deaminase 2 (isoform L) isoform 2
alt prot [760aa] adenosine monophosphate deaminase 2 (isoform L) isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         59           2
 C cysteine            1.6         14           1
 D aspartate           4.8         42           2
 E glutamate           8.5         75           2
 F phenylalanine       4.2         37           1
 G glycine             4.9         43           2
 H histidine           3.9         34           2
 I isoleucine          3.4         30           2
 K lysine              4.7         41           2
 L leucine            11.3         99           3
 M methionine          2.8         25           1
 N asparagine          3.2         28           2
 P proline             6.8         60           2
 Q glutamine           4.3         38           2
 R arginine            7.6         67           2
 S serine              7.3         64           2
 T threonine           3.6         32           2
 V valine              5.9         52           2
 W tryptophan          0.7          6           1
 Y tyrosine            3.8         33           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   adenosine monophosphate deaminase 2 (isoform L) isof... 
AMPD2                 0.906   adenosine monophosphate deaminase 2 (isoform L) isof...
AMPD2                 0.854   adenosine monophosphate deaminase 2 (isoform L) isof...
AMPD3                 0.433   adenosine monophosphate deaminase 3 isoform 1C [Homo...
AMPD3                 0.432   adenosine monophosphate deaminase 3 isoform 1A 
AMPD3                 0.430   adenosine monophosphate deaminase 3 isoform 1B [Homo...
AMPD1                 0.400   adenosine monophosphate deaminase 1 (isoform M) [Homo...
ZNF853                0.007   zinc finger protein 853 
CABP1                 0.007   calcium binding protein 1 isoform 3 
LIMCH1                0.007   LIM and calponin homology domains 1 isoform d [Homo...
LIMCH1                0.007   LIM and calponin homology domains 1 isoform c [Homo...
LIMCH1                0.007   LIM and calponin homology domains 1 isoform b [Homo...
LIMCH1                0.007   LIM and calponin homology domains 1 isoform a [Homo...
MYH15                 0.007   myosin, heavy polypeptide 15 
LOC645602             0.006   PREDICTED: hypothetical protein 
LOC645602             0.006   PREDICTED: hypothetical protein 
LOC645602             0.006   PREDICTED: hypothetical protein 
PUS10                 0.006   pseudouridylate synthase 10 
CECR1                 0.006   cat eye syndrome critical region protein 1 isoform b...
CECR1                 0.006   cat eye syndrome critical region protein 1 isoform a...
SPAG4                 0.006   sperm associated antigen 4 
SMARCA4               0.006   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.006   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.006   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.006   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.006   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.006   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.006   SWI/SNF-related matrix-associated actin-dependent re...
ATN1                  0.006   atrophin-1 
ATN1                  0.006   atrophin-1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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