Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: AMPD2 Sequence: fasta or formatted (798aa) NCBI GI: 34147621
Description:

adenosine monophosphate deaminase 2 (isoform L) isoform 2

Referenced in:

Purine Biosynthesis and Catabolism

Other entries for this name:
alt prot [879aa] adenosine monophosphate deaminase 2 (isoform L) isoform 1
alt prot [760aa] adenosine monophosphate deaminase 2 (isoform L) isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         48           2
 C cysteine            1.5         12           1
 D aspartate           5.0         40           2
 E glutamate           9.3         74           2
 F phenylalanine       4.3         34           1
 G glycine             4.4         35           2
 H histidine           4.1         33           2
 I isoleucine          3.8         30           2
 K lysine              4.4         35           2
 L leucine            11.5         92           3
 M methionine          3.0         24           1
 N asparagine          3.4         27           2
 P proline             6.4         51           2
 Q glutamine           4.4         35           2
 R arginine            7.1         57           2
 S serine              6.9         55           2
 T threonine           3.9         31           2
 V valine              6.0         48           2
 W tryptophan          0.8          6           1
 Y tyrosine            3.9         31           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   adenosine monophosphate deaminase 2 (isoform L) isof... 
AMPD2                 0.997   adenosine monophosphate deaminase 2 (isoform L) isof...
AMPD2                 0.941   adenosine monophosphate deaminase 2 (isoform L) isof...
AMPD3                 0.477   adenosine monophosphate deaminase 3 isoform 1C [Homo...
AMPD3                 0.476   adenosine monophosphate deaminase 3 isoform 1A 
AMPD3                 0.474   adenosine monophosphate deaminase 3 isoform 1B [Homo...
AMPD1                 0.440   adenosine monophosphate deaminase 1 (isoform M) [Homo...
LIMCH1                0.008   LIM and calponin homology domains 1 isoform d [Homo...
LIMCH1                0.008   LIM and calponin homology domains 1 isoform c [Homo...
LIMCH1                0.008   LIM and calponin homology domains 1 isoform b [Homo...
LIMCH1                0.008   LIM and calponin homology domains 1 isoform a [Homo...
MYH15                 0.008   myosin, heavy polypeptide 15 
PUS10                 0.007   pseudouridylate synthase 10 
CECR1                 0.007   cat eye syndrome critical region protein 1 isoform b...
CECR1                 0.007   cat eye syndrome critical region protein 1 isoform a...
ZNF853                0.007   zinc finger protein 853 
DEF6                  0.006   differentially expressed in FDCP 6 homolog 
TCHH                  0.006   trichohyalin 
LOC100131473          0.005   PREDICTED: hypothetical protein 
LOC100131473          0.005   PREDICTED: hypothetical protein 
LOC100287699          0.005   PREDICTED: hypothetical protein XP_002342252 
TNIK                  0.004   TRAF2 and NCK interacting kinase isoform 6 
TNIK                  0.004   TRAF2 and NCK interacting kinase isoform 5 
TNIK                  0.004   TRAF2 and NCK interacting kinase isoform 2 
TNIK                  0.004   TRAF2 and NCK interacting kinase isoform 1 
SCLT1                 0.004   sodium channel associated protein 1 
MCM10                 0.004   minichromosome maintenance complex component 10 isof...
CGN                   0.004   cingulin 
HOOK1                 0.004   hook homolog 1 
NBEA                  0.004   neurobeachin 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press