Guide to the Human Genome
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Name: AMPD3 Sequence: fasta or formatted (774aa) NCBI GI: 70906428
Description:

adenosine monophosphate deaminase 3 isoform 1C

Referenced in:

Purine Biosynthesis and Catabolism

Other entries for this name:
alt prot [776aa] adenosine monophosphate deaminase 3 isoform 1A
alt prot [767aa] adenosine monophosphate deaminase 3 isoform 1B
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.3         49           3
 C cysteine            1.2          9           1
 D aspartate           5.3         41           2
 E glutamate           7.8         60           2
 F phenylalanine       4.5         35           1
 G glycine             3.7         29           2
 H histidine           3.7         29           1
 I isoleucine          4.0         31           2
 K lysine              6.6         51           2
 L leucine            10.7         83           3
 M methionine          3.2         25           1
 N asparagine          4.0         31           2
 P proline             7.1         55           3
 Q glutamine           4.3         33           2
 R arginine            5.3         41           2
 S serine              7.1         55           1
 T threonine           4.8         37           2
 V valine              4.3         33           2
 W tryptophan          0.8          6           1
 Y tyrosine            5.3         41           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   adenosine monophosphate deaminase 3 isoform 1C [Homo... 
AMPD3                 0.993   adenosine monophosphate deaminase 3 isoform 1A 
AMPD3                 0.991   adenosine monophosphate deaminase 3 isoform 1B [Homo...
AMPD1                 0.579   adenosine monophosphate deaminase 1 (isoform M) [Homo...
AMPD2                 0.488   adenosine monophosphate deaminase 2 (isoform L) isof...
AMPD2                 0.488   adenosine monophosphate deaminase 2 (isoform L) isof...
AMPD2                 0.481   adenosine monophosphate deaminase 2 (isoform L) isof...
CECR1                 0.013   cat eye syndrome critical region protein 1 isoform b...
CECR1                 0.013   cat eye syndrome critical region protein 1 isoform a...
CCDC89                0.008   coiled-coil domain containing 89 
SHROOM3               0.008   shroom family member 3 protein 
WHSC2                 0.008   Wolf-Hirschhorn syndrome candidate 2 protein 
INPPL1                0.007   inositol polyphosphate phosphatase-like 1 
PHF14                 0.007   PHD finger protein 14 isoform 2 
PHF14                 0.007   PHD finger protein 14 isoform 1 
CRKRS                 0.006   Cdc2-related kinase, arginine/serine-rich isoform 2...
CRKRS                 0.006   Cdc2-related kinase, arginine/serine-rich isoform 1...
ZNF207                0.006   zinc finger protein 207 isoform c 
ZNF207                0.006   zinc finger protein 207 isoform a 
ZNF207                0.006   zinc finger protein 207 isoform b 
TNRC6B                0.005   trinucleotide repeat containing 6B isoform 3 
PPP4R4                0.005   HEAT-like repeat-containing protein isoform 1 
BAZ2A                 0.005   bromodomain adjacent to zinc finger domain, 2A [Homo...
TAF3                  0.005   RNA polymerase II transcription factor TAFII140 [Ho...
ABI1                  0.005   abl-interactor 1 isoform c 
DBF4B                 0.005   DBF4 homolog B isoform 1 
BCL9L                 0.005   B-cell CLL/lymphoma 9-like 
USP49                 0.005   ubiquitin thioesterase 49 
CALCOCO1              0.005   coiled-coil transcriptional coactivator isoform 1 [H...
MLL3                  0.004   myeloid/lymphoid or mixed-lineage leukemia 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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