Guide to the Human Genome
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Name: SPIRE2 Sequence: fasta or formatted (714aa) NCBI GI: 55749600
Description:

spire homolog 2

Referenced in:

Cytoskeleton

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.5         61           3
 C cysteine            3.1         22           4
 D aspartate           4.5         32           1
 E glutamate           9.4         67           5
 F phenylalanine       3.2         23           1
 G glycine             6.4         46           2
 H histidine           2.0         14           1
 I isoleucine          2.4         17           1
 K lysine              4.8         34           2
 L leucine            10.1         72           3
 M methionine          2.2         16           1
 N asparagine          1.7         12           2
 P proline             7.3         52           2
 Q glutamine           4.3         31           1
 R arginine            9.4         67           2
 S serine              8.3         59           2
 T threonine           4.1         29           2
 V valine              5.9         42           2
 W tryptophan          1.4         10           1
 Y tyrosine            1.1          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   spire homolog 2 
SPIRE1                0.340   spire homolog 1 isoform b 
SPIRE1                0.339   spire homolog 1 isoform a 
SPIRE1                0.302   spire homolog 1 isoform c 
LOC728080             0.014   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728047             0.014   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC727909             0.013   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC643699             0.013   PREDICTED: similar to golgi autoantigen, golgin sub...
LOC728047             0.011   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC390561             0.011   PREDICTED: similar to hect domain and RLD 2 
LOC390561             0.011   PREDICTED: similar to hect domain and RLD 2 
LOC728080             0.011   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC727909             0.011   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC643699             0.011   PREDICTED: similar to golgi autoantigen, golgin sub...
KNDC1                 0.011   kinase non-catalytic C-lobe domain (KIND) containin...
LOC390561             0.010   PREDICTED: similar to hect domain and RLD 2 
TTMA                  0.010   hypothetical protein LOC645369 
LOC728498             0.009   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC100128362          0.009   PREDICTED: similar to protein phosphatase 2, cataly...
LOC653073             0.008   PREDICTED: Golgin subfamily A member 8-like protein...
LOC100131738          0.008   PREDICTED: hypothetical protein 
LOC653073             0.007   PREDICTED: Golgin subfamily A member 8-like protein...
SF3B4                 0.007   splicing factor 3b, subunit 4 
LOC653125             0.007   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653125             0.007   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728498             0.007   PREDICTED: similar to Golgin subfamily A member 8-l...
PHF20L1               0.007   PHD finger protein 20-like 1 isoform 2 
PHF20L1               0.007   PHD finger protein 20-like 1 isoform 1 
PLEKHM1               0.006   pleckstrin homology domain containing, family M (wit...
LOC653720             0.006   PREDICTED: similar to Golgin subfamily A member 8-l...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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