Guide to the Human Genome
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Name: CDC20B Sequence: fasta or formatted (477aa) NCBI GI: 224593764
Description:

CDC20 cell division cycle 20 homolog B isoform 2

Referenced in:

Anaphase-promoting Complex
Additional Cell Cycle Functions
Spindle, M phase, and Meiosis
WD Repeat Proteins

Other entries for this name:
alt prot [515aa] CDC20 cell division cycle 20 homolog B isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.3         30           3
 C cysteine            2.5         12           1
 D aspartate           4.6         22           1
 E glutamate           5.2         25           3
 F phenylalanine       2.3         11           2
 G glycine             6.9         33           2
 H histidine           3.1         15           2
 I isoleucine          4.2         20           1
 K lysine              6.5         31           2
 L leucine             9.4         45           2
 M methionine          1.3          6           1
 N asparagine          4.0         19           1
 P proline             3.6         17           2
 Q glutamine           5.0         24           2
 R arginine            5.0         24           2
 S serine             11.1         53           2
 T threonine           6.5         31           2
 V valine              7.5         36           2
 W tryptophan          3.1         15           1
 Y tyrosine            1.7          8           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   CDC20 cell division cycle 20 homolog B isoform 2 [H... 
CDC20B                0.960   CDC20 cell division cycle 20 homolog B isoform 1 [Ho...
CDC20                 0.237   cell division cycle 20 
FZR1                  0.157   Fzr1 protein isoform 1 
FZR1                  0.157   Fzr1 protein isoform 2 
FZR1                  0.121   Fzr1 protein isoform 3 
WDR61                 0.042   WD repeat domain 61 
NLE1                  0.037   Notchless gene homolog isoform a 
KATNB1                0.036   katanin p80 subunit B 1 
WDR5B                 0.035   WD repeat domain 5B 
WDR5                  0.034   WD repeat domain 5 
WDR5                  0.034   WD repeat domain 5 
TBL1Y                 0.034   transducin beta-like 1Y 
TBL1Y                 0.034   transducin beta-like 1Y 
TBL1Y                 0.034   transducin beta-like 1Y 
NLE1                  0.032   Notchless gene homolog isoform b 
WDR69                 0.032   WD repeat domain 69 
TAF5                  0.031   TBP-associated factor 5 
WDR38                 0.031   WD repeat domain 38 
GNB5                  0.031   guanine nucleotide-binding protein, beta-5 subunit is...
GNB5                  0.031   guanine nucleotide-binding protein, beta-5 subunit i...
GEMIN5                0.028   gemin 5 
GNB2                  0.028   guanine nucleotide-binding protein, beta-2 subunit [...
GNB1                  0.025   guanine nucleotide-binding protein, beta-1 subunit [...
GNB4                  0.024   guanine nucleotide-binding protein, beta-4 subunit [...
WDR17                 0.024   WD repeat domain 17 isoform 2 
WDR17                 0.024   WD repeat domain 17 isoform 1 
SNRNP40               0.024   WD repeat domain 57 (U5 snRNP specific) 
WDR33                 0.024   WD repeat domain 33 isoform 1 
TBL1XR1               0.023   transducin (beta)-like 1 X-linked receptor 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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