Guide to the Human Genome
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Name: AHI1 Sequence: fasta or formatted (1196aa) NCBI GI: 199559438
Description:

Abelson helper integration site 1 isoform a

Referenced in:

Non-Receptor Tyrosine Kinase Pathways
WD Repeat Proteins

Other entries for this name:
alt mRNA [1196aa] Abelson helper integration site 1 isoform a
alt prot [1053aa] Abelson helper integration site 1 isoform b
alt mRNA [1196aa] Abelson helper integration site 1 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.1         49           3
 C cysteine            1.7         20           1
 D aspartate           6.1         73           3
 E glutamate           8.4        101           2
 F phenylalanine       3.7         44           2
 G glycine             4.3         51           1
 H histidine           3.8         45           2
 I isoleucine          5.8         69           2
 K lysine              9.1        109           4
 L leucine             7.1         85           2
 M methionine          2.2         26           2
 N asparagine          4.5         54           2
 P proline             5.4         65           2
 Q glutamine           4.1         49           2
 R arginine            4.8         57           1
 S serine              8.4        100           3
 T threonine           6.4         77           2
 V valine              6.0         72           2
 W tryptophan          1.1         13           2
 Y tyrosine            3.1         37           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Abelson helper integration site 1 isoform a 
AHI1                  1.000   Abelson helper integration site 1 isoform a 
AHI1                  1.000   Abelson helper integration site 1 isoform a 
AHI1                  0.865   Abelson helper integration site 1 isoform b 
WDR5                  0.036   WD repeat domain 5 
WDR5                  0.036   WD repeat domain 5 
WDR5B                 0.036   WD repeat domain 5B 
WDR44                 0.028   WD repeat domain 44 protein 
SNRNP40               0.023   WD repeat domain 57 (U5 snRNP specific) 
ATG16L1               0.020   APG16 autophagy 16-like isoform 1 
ATG16L1               0.020   APG16 autophagy 16-like isoform 2 
SMU1                  0.020   smu-1 suppressor of mec-8 and unc-52 homolog 
WDR82                 0.018   WD repeat domain 82 
WSB2                  0.018   WD SOCS-box protein 2 
KATNB1                0.017   katanin p80 subunit B 1 
WDR51B                0.017   WD repeat domain 51B 
WDR69                 0.017   WD repeat domain 69 
GNB3                  0.016   guanine nucleotide-binding protein, beta-3 subunit [H...
WDR51A                0.016   WD repeat domain 51A isoform 3 
WDR51A                0.016   WD repeat domain 51A isoform 2 
WDR51A                0.016   WD repeat domain 51A isoform 1 
RBBP5                 0.016   retinoblastoma binding protein 5 
MORG1                 0.015   mitogen-activated protein kinase organizer 1 
MORG1                 0.015   mitogen-activated protein kinase organizer 1 
GNB2                  0.014   guanine nucleotide-binding protein, beta-2 subunit [...
ITSN2                 0.014   intersectin 2 isoform 3 
ITSN2                 0.014   intersectin 2 isoform 1 
ITSN2                 0.014   intersectin 2 isoform 2 
GNB2L1                0.014   guanine nucleotide binding protein (G protein), beta ...
ITSN1                 0.014   intersectin 1 isoform ITSN-s 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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