Guide to the Human Genome
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Name: ATP8B2 Sequence: fasta or formatted (387aa) NCBI GI: 55743077
Description:

ATPase, class I, type 8B, member 2 isoform b

Referenced in:

Amphipath-transporting ATPase Family

Other entries for this name:
alt prot [1223aa] ATPase, class I, type 8B, member 2 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.7         18           2
 C cysteine            2.3          9           1
 D aspartate           3.9         15           2
 E glutamate           6.2         24           3
 F phenylalanine       6.2         24           2
 G glycine             4.9         19           2
 H histidine           0.8          3           1
 I isoleucine          7.0         27           3
 K lysine              5.4         21           2
 L leucine            11.4         44           4
 M methionine          2.6         10           1
 N asparagine          6.7         26           2
 P proline             3.9         15           2
 Q glutamine           4.1         16           2
 R arginine            4.4         17           2
 S serine              8.0         31           4
 T threonine           5.2         20           2
 V valine              7.2         28           2
 W tryptophan          2.3          9           1
 Y tyrosine            2.8         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ATPase, class I, type 8B, member 2 isoform b 
ATP8B2                0.889   ATPase, class I, type 8B, member 2 isoform a 
ATP8B4                0.699   ATPase class I type 8B member 4 
ATP8B1                0.464   ATPase, class I, type 8B, member 1 
ATP8B3                0.364   ATPase, class I, type 8B, member 3 
ATP8A1                0.334   ATPase, aminophospholipid transporter (APLT), class ...
ATP8A1                0.332   ATPase, aminophospholipid transporter (APLT), class...
ATP8A2                0.318   ATPase, aminophospholipid transporter-like, Class I...
ATP10D                0.303   ATPase, class V, type 10D 
ATP10A                0.285   ATPase, class V, type 10A 
ATP10B                0.269   ATPase, class V, type 10B 
ATP11B                0.231   ATPase, class VI, type 11B 
ATP11A                0.214   ATPase, class VI, type 11A isoform b 
ATP11A                0.214   ATPase, class VI, type 11A isoform a 
ATP11C                0.195   ATPase, class VI, type 11C isoform b 
ATP11C                0.195   ATPase, class VI, type 11C isoform a 
ATP9A                 0.156   ATPase, class II, type 9A 
ATP9B                 0.154   ATPase, class II, type 9B 
SLC12A3               0.015   solute carrier family 12, member 3 isoform 3 
SLC12A3               0.015   solute carrier family 12, member 3 isoform 2 
SLC12A3               0.015   solute carrier family 12, member 3 isoform 1 
ATP1A2                0.013   Na+/K+ -ATPase alpha 2 subunit proprotein 
ATP1A3                0.012   Na+/K+ -ATPase alpha 3 subunit 
ATP1A4                0.012   Na+/K+ -ATPase alpha 4 subunit isoform 1 
ATP1A1                0.009   Na+/K+ -ATPase alpha 1 subunit isoform c 
ATP1A1                0.009   Na+/K+ -ATPase alpha 1 subunit isoform d 
ATP1A1                0.009   Na+/K+ -ATPase alpha 1 subunit isoform a 
SHANK1                0.008   SH3 and multiple ankyrin repeat domains 1 
ATP4A                 0.007   hydrogen/potassium-exchanging ATPase 4A 
ABCA7                 0.005   ATP-binding cassette, sub-family A, member 7 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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