Guide to the Human Genome
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Name: ATP11A Sequence: fasta or formatted (1134aa) NCBI GI: 150421684
Description:

ATPase, class VI, type 11A isoform a

Referenced in:

Amphipath-transporting ATPase Family

Other entries for this name:
alt prot [1191aa] ATPase, class VI, type 11A isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         61           3
 C cysteine            2.3         26           2
 D aspartate           4.9         56           3
 E glutamate           6.5         74           2
 F phenylalanine       5.9         67           3
 G glycine             5.6         64           2
 H histidine           2.1         24           1
 I isoleucine          6.3         72           2
 K lysine              5.4         61           2
 L leucine            11.0        125           3
 M methionine          2.3         26           1
 N asparagine          3.6         41           2
 P proline             3.3         37           3
 Q glutamine           4.1         47           2
 R arginine            5.1         58           3
 S serine              6.5         74           3
 T threonine           6.1         69           2
 V valine              7.7         87           2
 W tryptophan          1.5         17           1
 Y tyrosine            4.2         48           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ATPase, class VI, type 11A isoform a 
ATP11A                0.980   ATPase, class VI, type 11A isoform b 
ATP11C                0.636   ATPase, class VI, type 11C isoform a 
ATP11C                0.636   ATPase, class VI, type 11C isoform b 
ATP11B                0.560   ATPase, class VI, type 11B 
ATP8A1                0.290   ATPase, aminophospholipid transporter (APLT), class...
ATP8A1                0.289   ATPase, aminophospholipid transporter (APLT), class ...
ATP8A2                0.285   ATPase, aminophospholipid transporter-like, Class I...
ATP8B2                0.273   ATPase, class I, type 8B, member 2 isoform a 
ATP8B4                0.270   ATPase class I type 8B member 4 
ATP8B1                0.261   ATPase, class I, type 8B, member 1 
ATP8B3                0.225   ATPase, class I, type 8B, member 3 
ATP9A                 0.190   ATPase, class II, type 9A 
ATP9B                 0.180   ATPase, class II, type 9B 
ATP10B                0.152   ATPase, class V, type 10B 
ATP10D                0.151   ATPase, class V, type 10D 
ATP10A                0.141   ATPase, class V, type 10A 
ATP8B2                0.072   ATPase, class I, type 8B, member 2 isoform b 
ATP2B4                0.038   plasma membrane calcium ATPase 4 isoform 4a 
ATP2B4                0.038   plasma membrane calcium ATPase 4 isoform 4b 
ATP2B3                0.033   plasma membrane calcium ATPase 3 isoform 3b 
ATP2B3                0.033   plasma membrane calcium ATPase 3 isoform 3a 
ATP2B1                0.031   plasma membrane calcium ATPase 1 isoform 1a 
ATP2B1                0.031   plasma membrane calcium ATPase 1 isoform 1b 
ATP2B2                0.029   plasma membrane calcium ATPase 2 isoform 2 
ATP2B2                0.027   plasma membrane calcium ATPase 2 isoform 1 
ATP13A4               0.023   ATPase type 13A4 
ATP13A5               0.020   ATPase type 13A5 
ATP12A                0.017   hydrogen/potassium-exchanging ATPase 12A 
ATP13A2               0.016   ATPase type 13A2 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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