Guide to the Human Genome
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Name: ATP8B3 Sequence: fasta or formatted (1300aa) NCBI GI: 44888835
Description:

ATPase, class I, type 8B, member 3

Referenced in:

Amphipath-transporting ATPase Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.5         97           2
 C cysteine            2.2         28           2
 D aspartate           4.6         60           2
 E glutamate           6.0         78           2
 F phenylalanine       5.2         68           2
 G glycine             5.8         76           2
 H histidine           1.8         23           2
 I isoleucine          5.2         68           4
 K lysine              4.8         63           2
 L leucine            11.4        148           3
 M methionine          2.5         32           2
 N asparagine          3.6         47           2
 P proline             4.1         53           2
 Q glutamine           4.4         57           2
 R arginine            6.2         81           2
 S serine              7.2         93           2
 T threonine           5.5         72           4
 V valine              7.2         94           3
 W tryptophan          1.6         21           1
 Y tyrosine            3.2         41           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ATPase, class I, type 8B, member 3 
ATP8B1                0.404   ATPase, class I, type 8B, member 1 
ATP8B4                0.348   ATPase class I type 8B member 4 
ATP8B2                0.348   ATPase, class I, type 8B, member 2 isoform a 
ATP8A2                0.259   ATPase, aminophospholipid transporter-like, Class I...
ATP8A1                0.247   ATPase, aminophospholipid transporter (APLT), class...
ATP8A1                0.246   ATPase, aminophospholipid transporter (APLT), class ...
ATP11A                0.198   ATPase, class VI, type 11A isoform b 
ATP11A                0.198   ATPase, class VI, type 11A isoform a 
ATP11B                0.194   ATPase, class VI, type 11B 
ATP11C                0.191   ATPase, class VI, type 11C isoform b 
ATP11C                0.191   ATPase, class VI, type 11C isoform a 
ATP10D                0.125   ATPase, class V, type 10D 
ATP10B                0.121   ATPase, class V, type 10B 
ATP9B                 0.121   ATPase, class II, type 9B 
ATP9A                 0.120   ATPase, class II, type 9A 
ATP10A                0.118   ATPase, class V, type 10A 
ATP8B2                0.107   ATPase, class I, type 8B, member 2 isoform b 
ATP2B4                0.026   plasma membrane calcium ATPase 4 isoform 4a 
ATP2B4                0.026   plasma membrane calcium ATPase 4 isoform 4b 
ATP2B3                0.024   plasma membrane calcium ATPase 3 isoform 3b 
ATP2B3                0.024   plasma membrane calcium ATPase 3 isoform 3a 
ATP2B2                0.022   plasma membrane calcium ATPase 2 isoform 2 
ATP2B2                0.022   plasma membrane calcium ATPase 2 isoform 1 
ATP2B1                0.018   plasma membrane calcium ATPase 1 isoform 1a 
ATP2B1                0.018   plasma membrane calcium ATPase 1 isoform 1b 
ATP2A3                0.012   ATPase, Ca++ transporting, ubiquitous isoform a [Hom...
ATP2A3                0.012   ATPase, Ca++ transporting, ubiquitous isoform c [Hom...
ATP2A3                0.012   ATPase, Ca++ transporting, ubiquitous isoform f [Hom...
ATP2A3                0.012   ATPase, Ca++ transporting, ubiquitous isoform c [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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