Guide to the Human Genome
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Name: ATP8A1 Sequence: fasta or formatted (1164aa) NCBI GI: 17978471
Description:

ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 isoform a

Referenced in:

Amphipath-transporting ATPase Family

Other entries for this name:
alt prot [1149aa] ATPase, aminophospholipid transporter (APLT), class I, type 8A, m...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         78           2
 C cysteine            2.0         23           2
 D aspartate           4.5         52           2
 E glutamate           6.1         71           2
 F phenylalanine       4.8         56           2
 G glycine             5.8         68           2
 H histidine           2.0         23           1
 I isoleucine          7.1         83           2
 K lysine              5.8         67           2
 L leucine            10.9        127           3
 M methionine          2.1         25           2
 N asparagine          5.2         60           2
 P proline             3.1         36           2
 Q glutamine           4.2         49           2
 R arginine            4.2         49           2
 S serine              6.7         78           3
 T threonine           6.4         74           2
 V valine              7.1         83           2
 W tryptophan          1.8         21           1
 Y tyrosine            3.5         41           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ATPase, aminophospholipid transporter (APLT), class ... 
ATP8A1                0.970   ATPase, aminophospholipid transporter (APLT), class...
ATP8A2                0.688   ATPase, aminophospholipid transporter-like, Class I...
ATP8B2                0.360   ATPase, class I, type 8B, member 2 isoform a 
ATP8B4                0.354   ATPase class I type 8B member 4 
ATP8B1                0.346   ATPase, class I, type 8B, member 1 
ATP11B                0.288   ATPase, class VI, type 11B 
ATP11A                0.283   ATPase, class VI, type 11A isoform b 
ATP11A                0.283   ATPase, class VI, type 11A isoform a 
ATP8B3                0.275   ATPase, class I, type 8B, member 3 
ATP11C                0.273   ATPase, class VI, type 11C isoform b 
ATP11C                0.273   ATPase, class VI, type 11C isoform a 
ATP9A                 0.189   ATPase, class II, type 9A 
ATP9B                 0.179   ATPase, class II, type 9B 
ATP10D                0.170   ATPase, class V, type 10D 
ATP10B                0.165   ATPase, class V, type 10B 
ATP10A                0.163   ATPase, class V, type 10A 
ATP8B2                0.110   ATPase, class I, type 8B, member 2 isoform b 
ATP2B4                0.029   plasma membrane calcium ATPase 4 isoform 4a 
ATP2B4                0.029   plasma membrane calcium ATPase 4 isoform 4b 
ATP2B2                0.029   plasma membrane calcium ATPase 2 isoform 2 
ATP2B2                0.028   plasma membrane calcium ATPase 2 isoform 1 
ATP2B3                0.027   plasma membrane calcium ATPase 3 isoform 3b 
ATP2B3                0.027   plasma membrane calcium ATPase 3 isoform 3a 
ATP13A4               0.025   ATPase type 13A4 
ATP13A3               0.024   ATPase type 13A3 
ATP2B1                0.023   plasma membrane calcium ATPase 1 isoform 1a 
ATP2B1                0.023   plasma membrane calcium ATPase 1 isoform 1b 
ATP12A                0.023   hydrogen/potassium-exchanging ATPase 12A 
ATP2A1                0.020   ATPase, Ca++ transporting, fast twitch 1 isoform b [...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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