Guide to the Human Genome
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Name: ATP11A Sequence: fasta or formatted (1191aa) NCBI GI: 150421681
Description:

ATPase, class VI, type 11A isoform b

Referenced in:

Amphipath-transporting ATPase Family

Other entries for this name:
alt prot [1134aa] ATPase, class VI, type 11A isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         67           3
 C cysteine            2.4         29           2
 D aspartate           4.9         58           3
 E glutamate           6.4         76           2
 F phenylalanine       5.5         66           3
 G glycine             5.8         69           2
 H histidine           2.4         29           3
 I isoleucine          6.1         73           2
 K lysine              5.2         62           2
 L leucine            10.7        127           3
 M methionine          2.2         26           1
 N asparagine          3.5         42           2
 P proline             3.9         46           3
 Q glutamine           4.1         49           2
 R arginine            5.2         62           3
 S serine              6.8         81           3
 T threonine           5.9         70           2
 V valine              7.6         90           2
 W tryptophan          1.6         19           1
 Y tyrosine            4.2         50           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ATPase, class VI, type 11A isoform b 
ATP11A                0.927   ATPase, class VI, type 11A isoform a 
ATP11C                0.601   ATPase, class VI, type 11C isoform b 
ATP11C                0.601   ATPase, class VI, type 11C isoform a 
ATP11B                0.530   ATPase, class VI, type 11B 
ATP8A1                0.275   ATPase, aminophospholipid transporter (APLT), class...
ATP8A1                0.274   ATPase, aminophospholipid transporter (APLT), class ...
ATP8A2                0.269   ATPase, aminophospholipid transporter-like, Class I...
ATP8B2                0.258   ATPase, class I, type 8B, member 2 isoform a 
ATP8B4                0.256   ATPase class I type 8B member 4 
ATP8B1                0.246   ATPase, class I, type 8B, member 1 
ATP8B3                0.213   ATPase, class I, type 8B, member 3 
ATP9A                 0.179   ATPase, class II, type 9A 
ATP9B                 0.171   ATPase, class II, type 9B 
ATP10B                0.144   ATPase, class V, type 10B 
ATP10D                0.143   ATPase, class V, type 10D 
ATP10A                0.133   ATPase, class V, type 10A 
ATP8B2                0.068   ATPase, class I, type 8B, member 2 isoform b 
ATP2B4                0.036   plasma membrane calcium ATPase 4 isoform 4a 
ATP2B4                0.036   plasma membrane calcium ATPase 4 isoform 4b 
ATP2B3                0.031   plasma membrane calcium ATPase 3 isoform 3b 
ATP2B3                0.031   plasma membrane calcium ATPase 3 isoform 3a 
ATP2B1                0.029   plasma membrane calcium ATPase 1 isoform 1a 
ATP2B1                0.029   plasma membrane calcium ATPase 1 isoform 1b 
ATP2B2                0.028   plasma membrane calcium ATPase 2 isoform 2 
ATP2B2                0.026   plasma membrane calcium ATPase 2 isoform 1 
ATP13A4               0.021   ATPase type 13A4 
ATP13A5               0.019   ATPase type 13A5 
ATP12A                0.016   hydrogen/potassium-exchanging ATPase 12A 
ATP13A2               0.015   ATPase type 13A2 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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