Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ATP1A1 Sequence: fasta or formatted (992aa) NCBI GI: 237681111
Description:

Na+/K+ -ATPase alpha 1 subunit isoform d

Referenced in:

Sodium, Potassium, and Calcium Membrane ATPases

Other entries for this name:
alt prot [1023aa] Na+/K+ -ATPase alpha 1 subunit isoform a
alt prot [1023aa] Na+/K+ -ATPase alpha 1 subunit isoform c
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.0         79           2
 C cysteine            2.3         23           2
 D aspartate           5.4         54           2
 E glutamate           6.6         65           3
 F phenylalanine       4.5         45           2
 G glycine             7.1         70           2
 H histidine           1.5         15           1
 I isoleucine          8.4         83           2
 K lysine              4.8         48           2
 L leucine             9.7         96           2
 M methionine          2.4         24           1
 N asparagine          4.2         42           1
 P proline             4.3         43           3
 Q glutamine           3.6         36           2
 R arginine            4.4         44           3
 S serine              5.7         57           2
 T threonine           6.0         60           2
 V valine              7.4         73           3
 W tryptophan          1.2         12           2
 Y tyrosine            2.3         23           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Na+/K+ -ATPase alpha 1 subunit isoform d 
ATP1A1                1.000   Na+/K+ -ATPase alpha 1 subunit isoform c 
ATP1A1                1.000   Na+/K+ -ATPase alpha 1 subunit isoform a 
ATP1A3                0.896   Na+/K+ -ATPase alpha 3 subunit 
ATP1A2                0.892   Na+/K+ -ATPase alpha 2 subunit proprotein 
ATP1A4                0.806   Na+/K+ -ATPase alpha 4 subunit isoform 1 
ATP12A                0.666   hydrogen/potassium-exchanging ATPase 12A 
ATP4A                 0.662   hydrogen/potassium-exchanging ATPase 4A 
ATP2C1                0.178   calcium-transporting ATPase 2C1 isoform 1b 
ATP2C1                0.178   calcium-transporting ATPase 2C1 isoform 1d 
ATP2C1                0.178   calcium-transporting ATPase 2C1 isoform 1c 
ATP2C1                0.178   calcium-transporting ATPase 2C1 isoform 1a 
ATP2A3                0.176   ATPase, Ca++ transporting, ubiquitous isoform a [Hom...
ATP2A3                0.176   ATPase, Ca++ transporting, ubiquitous isoform c [Hom...
ATP2A3                0.176   ATPase, Ca++ transporting, ubiquitous isoform f [Hom...
ATP2A3                0.176   ATPase, Ca++ transporting, ubiquitous isoform c [Hom...
ATP2A3                0.176   ATPase, Ca++ transporting, ubiquitous isoform b [Hom...
ATP2A3                0.176   ATPase, Ca++ transporting, ubiquitous isoform d [Hom...
ATP2A3                0.176   ATPase, Ca++ transporting, ubiquitous isoform e [Hom...
ATP2A2                0.170   ATPase, Ca++ transporting, slow twitch 2 isoform 2 [H...
ATP2A2                0.170   ATPase, Ca++ transporting, slow twitch 2 isoform 1 [...
ATP2A1                0.169   ATPase, Ca++ transporting, fast twitch 1 isoform b [...
ATP2A1                0.169   ATPase, Ca++ transporting, fast twitch 1 isoform a [...
ATP2C2                0.168   ATPase, Ca++ transporting, type 2C, member 2 
ATP2A2                0.156   ATPase, Ca++ transporting, slow twitch 2 isoform 3 ...
ATP1A4                0.135   Na+/K+ -ATPase alpha 4 subunit isoform 2 
ATP2B2                0.127   plasma membrane calcium ATPase 2 isoform 2 
ATP2B4                0.109   plasma membrane calcium ATPase 4 isoform 4a 
ATP2B4                0.109   plasma membrane calcium ATPase 4 isoform 4b 
ATP2B1                0.108   plasma membrane calcium ATPase 1 isoform 1a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press