Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ATP1A1 Sequence: fasta or formatted (1023aa) NCBI GI: 21361181
Description:

Na+/K+ -ATPase alpha 1 subunit isoform a

Referenced in:

Sodium, Potassium, and Calcium Membrane ATPases

Other entries for this name:
alt prot [1023aa] Na+/K+ -ATPase alpha 1 subunit isoform c
alt prot [992aa] Na+/K+ -ATPase alpha 1 subunit isoform d
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.9         81           2
 C cysteine            2.2         23           2
 D aspartate           5.7         58           2
 E glutamate           6.5         67           3
 F phenylalanine       4.4         45           2
 G glycine             7.4         76           2
 H histidine           1.5         15           1
 I isoleucine          8.1         83           2
 K lysine              5.5         56           2
 L leucine             9.4         96           2
 M methionine          2.4         25           1
 N asparagine          4.1         42           1
 P proline             4.3         44           3
 Q glutamine           3.6         37           2
 R arginine            4.5         46           3
 S serine              5.7         58           2
 T threonine           5.9         60           2
 V valine              7.3         75           3
 W tryptophan          1.2         12           2
 Y tyrosine            2.3         24           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Na+/K+ -ATPase alpha 1 subunit isoform a 
ATP1A1                0.996   Na+/K+ -ATPase alpha 1 subunit isoform c 
ATP1A1                0.969   Na+/K+ -ATPase alpha 1 subunit isoform d 
ATP1A2                0.875   Na+/K+ -ATPase alpha 2 subunit proprotein 
ATP1A3                0.874   Na+/K+ -ATPase alpha 3 subunit 
ATP1A4                0.784   Na+/K+ -ATPase alpha 4 subunit isoform 1 
ATP12A                0.647   hydrogen/potassium-exchanging ATPase 12A 
ATP4A                 0.645   hydrogen/potassium-exchanging ATPase 4A 
ATP2C1                0.172   calcium-transporting ATPase 2C1 isoform 1b 
ATP2C1                0.172   calcium-transporting ATPase 2C1 isoform 1d 
ATP2C1                0.172   calcium-transporting ATPase 2C1 isoform 1c 
ATP2C1                0.172   calcium-transporting ATPase 2C1 isoform 1a 
ATP2A3                0.171   ATPase, Ca++ transporting, ubiquitous isoform a [Hom...
ATP2A3                0.171   ATPase, Ca++ transporting, ubiquitous isoform c [Hom...
ATP2A3                0.171   ATPase, Ca++ transporting, ubiquitous isoform f [Hom...
ATP2A3                0.171   ATPase, Ca++ transporting, ubiquitous isoform c [Hom...
ATP2A3                0.171   ATPase, Ca++ transporting, ubiquitous isoform b [Hom...
ATP2A3                0.171   ATPase, Ca++ transporting, ubiquitous isoform d [Hom...
ATP2A3                0.171   ATPase, Ca++ transporting, ubiquitous isoform e [Hom...
ATP2A2                0.165   ATPase, Ca++ transporting, slow twitch 2 isoform 2 [H...
ATP2A2                0.165   ATPase, Ca++ transporting, slow twitch 2 isoform 1 [...
ATP2A1                0.164   ATPase, Ca++ transporting, fast twitch 1 isoform b [...
ATP2A1                0.164   ATPase, Ca++ transporting, fast twitch 1 isoform a [...
ATP2C2                0.163   ATPase, Ca++ transporting, type 2C, member 2 
ATP2A2                0.151   ATPase, Ca++ transporting, slow twitch 2 isoform 3 ...
ATP1A4                0.130   Na+/K+ -ATPase alpha 4 subunit isoform 2 
ATP2B2                0.123   plasma membrane calcium ATPase 2 isoform 2 
ATP2B4                0.105   plasma membrane calcium ATPase 4 isoform 4a 
ATP2B4                0.105   plasma membrane calcium ATPase 4 isoform 4b 
ATP2B1                0.105   plasma membrane calcium ATPase 1 isoform 1a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press