Guide to the Human Genome
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Name: ATP8A2 Sequence: fasta or formatted (1188aa) NCBI GI: 117168245
Description:

ATPase, aminophospholipid transporter-like, Class I, type 8A, member 2

Referenced in:

Amphipath-transporting ATPase Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         84           2
 C cysteine            2.2         26           2
 D aspartate           4.6         55           2
 E glutamate           5.7         68           2
 F phenylalanine       4.2         50           2
 G glycine             6.1         73           1
 H histidine           2.0         24           1
 I isoleucine          6.5         77           3
 K lysine              6.1         73           3
 L leucine            11.6        138           4
 M methionine          2.2         26           1
 N asparagine          4.5         54           2
 P proline             3.4         40           3
 Q glutamine           3.5         41           2
 R arginine            5.0         59           2
 S serine              6.0         71           3
 T threonine           7.0         83           2
 V valine              7.2         85           3
 W tryptophan          1.6         19           1
 Y tyrosine            3.5         42           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ATPase, aminophospholipid transporter-like, Class I... 
ATP8A1                0.674   ATPase, aminophospholipid transporter (APLT), class ...
ATP8A1                0.667   ATPase, aminophospholipid transporter (APLT), class...
ATP8B2                0.349   ATPase, class I, type 8B, member 2 isoform a 
ATP8B1                0.344   ATPase, class I, type 8B, member 1 
ATP8B4                0.342   ATPase class I type 8B member 4 
ATP8B3                0.284   ATPase, class I, type 8B, member 3 
ATP11B                0.277   ATPase, class VI, type 11B 
ATP11A                0.274   ATPase, class VI, type 11A isoform a 
ATP11A                0.272   ATPase, class VI, type 11A isoform b 
ATP11C                0.253   ATPase, class VI, type 11C isoform b 
ATP11C                0.253   ATPase, class VI, type 11C isoform a 
ATP9A                 0.176   ATPase, class II, type 9A 
ATP9B                 0.169   ATPase, class II, type 9B 
ATP10B                0.163   ATPase, class V, type 10B 
ATP10D                0.159   ATPase, class V, type 10D 
ATP10A                0.156   ATPase, class V, type 10A 
ATP8B2                0.102   ATPase, class I, type 8B, member 2 isoform b 
ATP2B4                0.038   plasma membrane calcium ATPase 4 isoform 4a 
ATP2B4                0.038   plasma membrane calcium ATPase 4 isoform 4b 
ATP2B2                0.032   plasma membrane calcium ATPase 2 isoform 2 
ATP2B3                0.028   plasma membrane calcium ATPase 3 isoform 3b 
ATP2B3                0.028   plasma membrane calcium ATPase 3 isoform 3a 
ATP2B2                0.028   plasma membrane calcium ATPase 2 isoform 1 
ATP13A4               0.026   ATPase type 13A4 
ATP13A3               0.022   ATPase type 13A3 
ATP2B1                0.021   plasma membrane calcium ATPase 1 isoform 1a 
ATP2B1                0.021   plasma membrane calcium ATPase 1 isoform 1b 
ATP1A1                0.019   Na+/K+ -ATPase alpha 1 subunit isoform c 
ATP1A1                0.019   Na+/K+ -ATPase alpha 1 subunit isoform d 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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