Guide to the Human Genome
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Name: ATP4A Sequence: fasta or formatted (1035aa) NCBI GI: 51944966
Description:

hydrogen/potassium-exchanging ATPase 4A

Referenced in:

Sodium, Potassium, and Calcium Membrane ATPases
Stomach, Small Intestine, and Colon
Common Drug Targets

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.0         93           3
 C cysteine            2.9         30           2
 D aspartate           5.2         54           2
 E glutamate           5.8         60           1
 F phenylalanine       4.7         49           2
 G glycine             7.2         75           5
 H histidine           1.3         13           2
 I isoleucine          7.1         73           2
 K lysine              4.6         48           4
 L leucine             9.8        101           3
 M methionine          2.5         26           1
 N asparagine          3.3         34           1
 P proline             4.6         48           2
 Q glutamine           4.4         46           2
 R arginine            4.9         51           2
 S serine              5.5         57           2
 T threonine           5.8         60           2
 V valine              7.3         76           4
 W tryptophan          1.1         11           2
 Y tyrosine            2.9         30           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hydrogen/potassium-exchanging ATPase 4A 
ATP1A3                0.641   Na+/K+ -ATPase alpha 3 subunit 
ATP12A                0.638   hydrogen/potassium-exchanging ATPase 12A 
ATP1A1                0.636   Na+/K+ -ATPase alpha 1 subunit isoform a 
ATP1A1                0.634   Na+/K+ -ATPase alpha 1 subunit isoform c 
ATP1A2                0.633   Na+/K+ -ATPase alpha 2 subunit proprotein 
ATP1A1                0.631   Na+/K+ -ATPase alpha 1 subunit isoform d 
ATP1A4                0.596   Na+/K+ -ATPase alpha 4 subunit isoform 1 
ATP2A3                0.170   ATPase, Ca++ transporting, ubiquitous isoform a [Hom...
ATP2A3                0.170   ATPase, Ca++ transporting, ubiquitous isoform c [Hom...
ATP2A3                0.170   ATPase, Ca++ transporting, ubiquitous isoform f [Hom...
ATP2A3                0.170   ATPase, Ca++ transporting, ubiquitous isoform c [Hom...
ATP2A3                0.170   ATPase, Ca++ transporting, ubiquitous isoform b [Hom...
ATP2A3                0.170   ATPase, Ca++ transporting, ubiquitous isoform d [Hom...
ATP2A3                0.170   ATPase, Ca++ transporting, ubiquitous isoform e [Hom...
ATP2A2                0.169   ATPase, Ca++ transporting, slow twitch 2 isoform 2 [H...
ATP2A2                0.169   ATPase, Ca++ transporting, slow twitch 2 isoform 1 [...
ATP2C1                0.162   calcium-transporting ATPase 2C1 isoform 1b 
ATP2C1                0.162   calcium-transporting ATPase 2C1 isoform 1d 
ATP2C1                0.162   calcium-transporting ATPase 2C1 isoform 1c 
ATP2C1                0.162   calcium-transporting ATPase 2C1 isoform 1a 
ATP2A1                0.162   ATPase, Ca++ transporting, fast twitch 1 isoform b [...
ATP2A1                0.162   ATPase, Ca++ transporting, fast twitch 1 isoform a [...
ATP2A2                0.156   ATPase, Ca++ transporting, slow twitch 2 isoform 3 ...
ATP2C2                0.149   ATPase, Ca++ transporting, type 2C, member 2 
ATP2B2                0.111   plasma membrane calcium ATPase 2 isoform 2 
ATP2B4                0.097   plasma membrane calcium ATPase 4 isoform 4a 
ATP2B4                0.097   plasma membrane calcium ATPase 4 isoform 4b 
ATP2B3                0.096   plasma membrane calcium ATPase 3 isoform 3b 
ATP2B3                0.096   plasma membrane calcium ATPase 3 isoform 3a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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