Guide to the Human Genome
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Name: ATP11C Sequence: fasta or formatted (1119aa) NCBI GI: 58331222
Description:

ATPase, class VI, type 11C isoform b

Referenced in:

Amphipath-transporting ATPase Family

Other entries for this name:
alt prot [1132aa] ATPase, class VI, type 11C isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         69           2
 C cysteine            2.1         24           2
 D aspartate           4.6         51           2
 E glutamate           7.1         80           2
 F phenylalanine       6.3         70           3
 G glycine             4.9         55           2
 H histidine           1.8         20           1
 I isoleucine          6.3         70           2
 K lysine              6.3         71           2
 L leucine            10.7        120           3
 M methionine          2.3         26           1
 N asparagine          4.5         50           2
 P proline             2.8         31           2
 Q glutamine           3.8         42           2
 R arginine            4.3         48           3
 S serine              6.1         68           3
 T threonine           7.5         84           2
 V valine              6.8         76           2
 W tryptophan          1.3         15           1
 Y tyrosine            4.4         49           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ATPase, class VI, type 11C isoform b 
ATP11C                0.981   ATPase, class VI, type 11C isoform a 
ATP11A                0.647   ATPase, class VI, type 11A isoform b 
ATP11A                0.647   ATPase, class VI, type 11A isoform a 
ATP11B                0.532   ATPase, class VI, type 11B 
ATP8A1                0.287   ATPase, aminophospholipid transporter (APLT), class...
ATP8A1                0.284   ATPase, aminophospholipid transporter (APLT), class ...
ATP8B2                0.274   ATPase, class I, type 8B, member 2 isoform a 
ATP8B4                0.274   ATPase class I type 8B member 4 
ATP8A2                0.269   ATPase, aminophospholipid transporter-like, Class I...
ATP8B1                0.256   ATPase, class I, type 8B, member 1 
ATP8B3                0.221   ATPase, class I, type 8B, member 3 
ATP9A                 0.189   ATPase, class II, type 9A 
ATP9B                 0.174   ATPase, class II, type 9B 
ATP10B                0.151   ATPase, class V, type 10B 
ATP10D                0.145   ATPase, class V, type 10D 
ATP10A                0.144   ATPase, class V, type 10A 
ATP8B2                0.067   ATPase, class I, type 8B, member 2 isoform b 
ATP2B4                0.027   plasma membrane calcium ATPase 4 isoform 4a 
ATP2B4                0.027   plasma membrane calcium ATPase 4 isoform 4b 
ATP13A4               0.026   ATPase type 13A4 
ATP2B2                0.025   plasma membrane calcium ATPase 2 isoform 2 
ATP2B1                0.024   plasma membrane calcium ATPase 1 isoform 1a 
ATP2B1                0.024   plasma membrane calcium ATPase 1 isoform 1b 
ATP2B2                0.024   plasma membrane calcium ATPase 2 isoform 1 
ATP2B3                0.022   plasma membrane calcium ATPase 3 isoform 3b 
ATP2B3                0.022   plasma membrane calcium ATPase 3 isoform 3a 
ATP12A                0.019   hydrogen/potassium-exchanging ATPase 12A 
ATP1A4                0.019   Na+/K+ -ATPase alpha 4 subunit isoform 1 
ATP13A3               0.018   ATPase type 13A3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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