Guide to the Human Genome
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Name: DDHD2 Sequence: fasta or formatted (711aa) NCBI GI: 54792780
Description:

DDHD domain containing 2

Referenced in:

Lipid Metabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.4         24           1
 C cysteine            1.7         12           1
 D aspartate           5.9         42           1
 E glutamate           7.7         55           2
 F phenylalanine       4.6         33           2
 G glycine             6.0         43           2
 H histidine           2.4         17           2
 I isoleucine          5.9         42           3
 K lysine              5.3         38           3
 L leucine             9.1         65           2
 M methionine          2.3         16           1
 N asparagine          4.4         31           2
 P proline             6.5         46           1
 Q glutamine           4.6         33           2
 R arginine            5.1         36           2
 S serine              8.6         61           3
 T threonine           4.8         34           1
 V valine              6.6         47           2
 W tryptophan          1.3          9           1
 Y tyrosine            3.8         27           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DDHD domain containing 2 
SEC23IP               0.510   Sec23-interacting protein p125 
DDHD1                 0.063   DDHD domain containing 1 isoform c 
DDHD1                 0.063   DDHD domain containing 1 isoform a 
DDHD1                 0.062   DDHD domain containing 1 isoform b 
PITPNM3               0.039   PITPNM family member 3 
PITPNM1               0.030   phosphatidylinositol transfer protein, membrane-ass...
PITPNM1               0.030   phosphatidylinositol transfer protein, membrane-ass...
ANKS4B                0.026   harmonin-interacting ankyrin-repeat containing prot...
USH1G                 0.025   Usher syndrome 1G protein 
ANKS6                 0.014   ankyrin repeat and sterile alpha motif domain contai...
PITPNM2               0.013   phosphatidylinositol transfer protein, membrane-asso...
BICC1                 0.010   bicaudal C homolog 1 
ANKS3                 0.006   ankyrin repeat and sterile alpha motif domain contai...
OSBPL10               0.006   oxysterol-binding protein-like protein 10 
TNKS                  0.005   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
BAZ1B                 0.004   bromodomain adjacent to zinc finger domain, 1B [Homo...
TNKS2                 0.004   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
PHF3                  0.003   PHD finger protein 3 
IRX6                  0.003   iroquois homeobox protein 6 
TTN                   0.003   titin isoform N2-A 
ATF7IP                0.003   activating transcription factor 7 interacting protei...
KIAA1009              0.003   KIAA1009 protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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