Guide to the Human Genome
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Name: ANKS4B Sequence: fasta or formatted (417aa) NCBI GI: 148664246
Description:

harmonin-interacting ankyrin-repeat containing protein

Referenced in:

Ankyrin Family
Auditory and Vestibular Functions

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         32           3
 C cysteine            1.4          6           1
 D aspartate           7.4         31           3
 E glutamate          10.3         43           4
 F phenylalanine       4.1         17           1
 G glycine             6.2         26           2
 H histidine           2.4         10           2
 I isoleucine          3.8         16           2
 K lysine              7.0         29           2
 L leucine            10.6         44           3
 M methionine          1.4          6           1
 N asparagine          4.8         20           1
 P proline             3.6         15           1
 Q glutamine           5.5         23           2
 R arginine            5.5         23           2
 S serine              8.9         37           3
 T threonine           3.8         16           1
 V valine              3.8         16           2
 W tryptophan          0.7          3           1
 Y tyrosine            1.0          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   harmonin-interacting ankyrin-repeat containing prot... 
USH1G                 0.385   Usher syndrome 1G protein 
ANKRD28               0.067   ankyrin repeat domain 28 
ANKRD50               0.056   ankyrin repeat domain 50 
ANKRD44               0.052   ankyrin repeat domain 44 
CTTNBP2               0.050   cortactin binding protein 2 
TANC1                 0.050   tetratricopeptide repeat, ankyrin repeat and coiled...
TANC1                 0.050   tetratricopeptide repeat, ankyrin repeat and coiled...
ANK1                  0.047   ankyrin 1 isoform 9 
ANK1                  0.047   ankyrin 1 isoform 1 
ANK1                  0.047   ankyrin 1 isoform 3 
ANK1                  0.047   ankyrin 1 isoform 2 
ANK1                  0.047   ankyrin 1 isoform 4 
ASB3                  0.047   ankyrin repeat and SOCS box-containing protein 3 iso...
ASB3                  0.047   ankyrin repeat and SOCS box-containing protein 3 isof...
DDHD2                 0.046   DDHD domain containing 2 
EHMT2                 0.046   euchromatic histone-lysine N-methyltransferase 2 is...
EHMT2                 0.046   euchromatic histone-lysine N-methyltransferase 2 is...
TRPA1                 0.045   ankyrin-like protein 1 
ANKRD52               0.043   ankyrin repeat domain 52 
ESPN                  0.043   espin 
ANKRD54               0.043   ankyrin repeat domain 54 
ANK3                  0.043   ankyrin 3 isoform 1 
INVS                  0.043   inversin isoform a 
INVS                  0.043   inversin isoform b 
ANKDD1A               0.043   ankyrin repeat and death domain containing 1A 
HECTD1                0.042   HECT domain containing 1 
ANKRD26               0.042   ankyrin repeat domain 26 
KIDINS220             0.042   kinase D-interacting substrate of 220 kDa 
TNKS2                 0.042   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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