Guide to the Human Genome
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Name: DDHD1 Sequence: fasta or formatted (900aa) NCBI GI: 237757346
Description:

DDHD domain containing 1 isoform c

Referenced in:

Lipid Metabolism

Other entries for this name:
alt prot [872aa] DDHD domain containing 1 isoform a
alt prot [879aa] DDHD domain containing 1 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.7         42           2
 C cysteine            1.4         13           2
 D aspartate           6.0         54           3
 E glutamate           8.1         73           4
 F phenylalanine       3.7         33           2
 G glycine             8.9         80           5
 H histidine           3.8         34           2
 I isoleucine          4.0         36           2
 K lysine              4.2         38           2
 L leucine             9.2         83           2
 M methionine          2.1         19           2
 N asparagine          3.6         32           1
 P proline             6.3         57           2
 Q glutamine           3.2         29           2
 R arginine            5.9         53           2
 S serine              9.2         83           3
 T threonine           5.6         50           2
 V valine              5.3         48           2
 W tryptophan          1.4         13           1
 Y tyrosine            3.3         30           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DDHD domain containing 1 isoform c 
DDHD1                 0.960   DDHD domain containing 1 isoform a 
DDHD1                 0.956   DDHD domain containing 1 isoform b 
DDHD2                 0.049   DDHD domain containing 2 
SEC23IP               0.049   Sec23-interacting protein p125 
PITPNM1               0.019   phosphatidylinositol transfer protein, membrane-ass...
PITPNM1               0.017   phosphatidylinositol transfer protein, membrane-ass...
PITPNM3               0.015   PITPNM family member 3 
PITPNM2               0.014   phosphatidylinositol transfer protein, membrane-asso...
XYLT1                 0.007   xylosyltransferase I 
COL7A1                0.007   alpha 1 type VII collagen precursor 
LOR                   0.007   loricrin 
DAGLA                 0.007   neural stem cell-derived dendrite regulator 
ZNF703                0.007   zinc finger protein 703 
LOC338758             0.007   PREDICTED: hypothetical protein 
LOC338758             0.007   PREDICTED: hypothetical protein 
LOC338758             0.007   PREDICTED: hypothetical protein 
IQSEC1                0.006   IQ motif and Sec7 domain 1 isoform a 
MBD5                  0.006   methyl-CpG binding domain protein 5 
PILRB                 0.005   paired immunoglobulin-like type 2 receptor beta isof...
MAP7D2                0.005   MAP7 domain containing 2 
DLX2                  0.005   distal-less homeobox 2 
LOC100287063          0.005   PREDICTED: hypothetical protein 
SOX11                 0.005   SRY-box 11 
ZBTB10                0.005   zinc finger and BTB domain containing 10 isoform b ...
ZBTB10                0.005   zinc finger and BTB domain containing 10 isoform a ...
COL4A1                0.005   alpha 1 type IV collagen preproprotein 
LOC729989             0.005   PREDICTED: hypothetical protein 
LOC100293268          0.005   PREDICTED: hypothetical protein 
LOC729989             0.005   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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