Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: PITPNM3 Sequence: fasta or formatted (974aa) NCBI GI: 190358515
Description:

PITPNM family member 3

Referenced in:

Inositol Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         79           2
 C cysteine            2.0         19           1
 D aspartate           5.6         55           2
 E glutamate           5.3         52           2
 F phenylalanine       4.0         39           2
 G glycine             6.9         67           3
 H histidine           3.2         31           2
 I isoleucine          4.2         41           1
 K lysine              3.9         38           2
 L leucine             9.1         89           3
 M methionine          2.2         21           1
 N asparagine          2.2         21           2
 P proline             7.7         75           3
 Q glutamine           4.4         43           2
 R arginine            6.6         64           2
 S serine             11.3        110           3
 T threonine           3.3         32           1
 V valine              6.8         66           2
 W tryptophan          1.0         10           2
 Y tyrosine            2.3         22           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PITPNM family member 3 
PITPNM2               0.537   phosphatidylinositol transfer protein, membrane-asso...
PITPNM1               0.447   phosphatidylinositol transfer protein, membrane-ass...
PITPNM1               0.445   phosphatidylinositol transfer protein, membrane-ass...
DDHD2                 0.029   DDHD domain containing 2 
DDHD1                 0.016   DDHD domain containing 1 isoform b 
DDHD1                 0.016   DDHD domain containing 1 isoform a 
DDHD1                 0.014   DDHD domain containing 1 isoform c 
SEC23IP               0.013   Sec23-interacting protein p125 
HMGXB3                0.008   HMG box domain containing 3 
NARG2                 0.005   NMDA receptor regulated 2 isoform b 
NARG2                 0.005   NMDA receptor regulated 2 isoform a 
PRR7                  0.005   proline rich 7 (synaptic) 
DACH2                 0.005   dachshund 2 isoform c 
DACH2                 0.005   dachshund 2 isoform b 
DACH2                 0.005   dachshund 2 isoform a 
PNN                   0.004   pinin, desmosome associated protein 
SH3PXD2B              0.004   SH3 and PX domains 2B 
TNRC18                0.004   trinucleotide repeat containing 18 
FCHO2                 0.004   FCH domain only 2 isoform b 
FCHO2                 0.004   FCH domain only 2 isoform a 
BCL6B                 0.004   B-cell CLL/lymphoma 6, member B (zinc finger protein...
CPEB3                 0.004   cytoplasmic polyadenylation element binding protein ...
NEK4                  0.004   NIMA-related kinase 4 
SPANXN2               0.004   SPANX-N2 protein 
SDK1                  0.004   sidekick 1 
FLJ22184              0.004   PREDICTED: hypothetical protein FLJ22184 
ZFPM2                 0.004   zinc finger protein, multitype 2 
SFRS18                0.004   splicing factor, arginine/serine-rich 130 
SRRM2                 0.004   splicing coactivator subunit SRm300 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press