Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: BICC1 Sequence: fasta or formatted (974aa) NCBI GI: 122937472
Description:

bicaudal C homolog 1

Referenced in:

Additional Genes in Development

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.8         76           4
 C cysteine            1.1         11           1
 D aspartate           3.7         36           2
 E glutamate           5.9         57           2
 F phenylalanine       2.4         23           2
 G glycine             7.4         72           3
 H histidine           2.8         27           2
 I isoleucine          4.6         45           1
 K lysine              6.3         61           2
 L leucine             9.2         90           2
 M methionine          3.1         30           2
 N asparagine          4.6         45           2
 P proline             6.6         64           3
 Q glutamine           4.5         44           3
 R arginine            4.2         41           2
 S serine             12.6        123           3
 T threonine           6.4         62           3
 V valine              4.6         45           2
 W tryptophan          0.6          6           1
 Y tyrosine            1.6         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   bicaudal C homolog 1 
ANKS6                 0.028   ankyrin repeat and sterile alpha motif domain contai...
HDLBP                 0.027   high density lipoprotein binding protein 
HDLBP                 0.027   high density lipoprotein binding protein 
PCBP2                 0.023   poly(rC) binding protein 2 isoform c 
ANKS3                 0.022   ankyrin repeat and sterile alpha motif domain contai...
PCBP2                 0.021   poly(rC) binding protein 2 isoform f 
PCBP2                 0.021   poly(rC) binding protein 2 isoform g 
PCBP2                 0.017   poly(rC) binding protein 2 isoform b 
PCBP3                 0.017   poly(rC) binding protein 3 isoform 1 
PCBP3                 0.016   poly(rC) binding protein 3 isoform 2 
PCBP1                 0.015   poly(rC) binding protein 1 
PCBP2                 0.015   poly(rC) binding protein 2 isoform a 
PCBP2                 0.015   poly(rC) binding protein 2 isoform e 
PCBP4                 0.015   poly(rC) binding protein 4 isoform c 
PCBP4                 0.015   poly(rC) binding protein 4 isoform c 
PCBP2                 0.013   poly(rC) binding protein 2 isoform d 
MUC5AC                0.012   mucin 5AC 
TNKS2                 0.012   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
SPATC1                0.011   spermatogenesis and centriole associated 1 isoform ...
SPATC1                0.011   spermatogenesis and centriole associated 1 isoform ...
SRCAP                 0.011   Snf2-related CBP activator protein 
MUC5B                 0.011   mucin 5, subtype B, tracheobronchial 
MUC17                 0.011   mucin 17 
ZCCHC14               0.010   zinc finger, CCHC domain containing 14 
DUSP27                0.009   dual specificity phosphatase 27 
NCAN                  0.009   chondroitin sulfate proteoglycan 3 
MEX3A                 0.009   MEX3A protein 
IGF2BP2               0.009   insulin-like growth factor 2 mRNA binding protein 2 ...
MUC12                 0.009   PREDICTED: mucin 12 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press