Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 54792138
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|54792138 helicase with zinc finger domain [Homo sapiens]
(1942 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|54792138 helicase with zinc finger domain [Homo sapiens] 3964 0.0
gi|156105693 PPAR-alpha interacting complex protein 285 isoform ... 482 e-135
gi|156105695 PPAR-alpha interacting complex protein 285 isoform ... 272 2e-72
gi|14251207 MOV10-like 1 [Homo sapiens] 194 9e-49
gi|194272168 Mov10, Moloney leukemia virus 10, homolog [Homo sap... 180 1e-44
gi|14211540 Mov10, Moloney leukemia virus 10, homolog [Homo sapi... 180 1e-44
gi|18375673 regulator of nonsense transcripts 1 [Homo sapiens] 117 1e-25
gi|119392094 immunoglobulin mu binding protein 2 [Homo sapiens] 86 5e-16
gi|122937299 DNA replication helicase 2 homolog [Homo sapiens] 80 2e-14
gi|113722133 senataxin [Homo sapiens] 69 6e-11
gi|19718731 bromodomain-containing protein 4 isoform long [Homo ... 65 6e-10
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 64 1e-09
gi|237757326 synaptojanin 1 isoform d [Homo sapiens] 64 2e-09
gi|28626521 zinc finger, NFX1-type containing 1 [Homo sapiens] 61 9e-09
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 61 1e-08
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 61 1e-08
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 61 1e-08
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 59 4e-08
gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [... 59 6e-08
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 58 1e-07
gi|150417989 cyclin K isoform 1 [Homo sapiens] 58 1e-07
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ... 57 2e-07
gi|48255900 SWI/SNF-related matrix-associated actin-dependent re... 56 3e-07
gi|48255898 SWI/SNF-related matrix-associated actin-dependent re... 56 3e-07
gi|93141033 PAX interacting protein 1 [Homo sapiens] 56 3e-07
gi|151301053 RNA binding motif protein 33 [Homo sapiens] 56 3e-07
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 55 7e-07
gi|187829452 autism susceptibility candidate 2 isoform 2 [Homo s... 54 1e-06
gi|32307128 nuclear receptor coactivator 6 [Homo sapiens] 53 3e-06
gi|110349719 titin isoform N2-A [Homo sapiens] 53 3e-06
>gi|54792138 helicase with zinc finger domain [Homo sapiens]
Length = 1942
Score = 3964 bits (10279), Expect = 0.0
Identities = 1942/1942 (100%), Positives = 1942/1942 (100%)
Query: 1 MEDRRAEKSCEQACESLKRQDYEMALKHCTEALLSLGQYSMADFTGPCPLEIERIKIESL 60
MEDRRAEKSCEQACESLKRQDYEMALKHCTEALLSLGQYSMADFTGPCPLEIERIKIESL
Sbjct: 1 MEDRRAEKSCEQACESLKRQDYEMALKHCTEALLSLGQYSMADFTGPCPLEIERIKIESL 60
Query: 61 LYRIASFLQLKNYVQADEDCRHVLGEGLAKGEDAFRAVLCCMQLKGKLQPVSTILAKSLT 120
LYRIASFLQLKNYVQADEDCRHVLGEGLAKGEDAFRAVLCCMQLKGKLQPVSTILAKSLT
Sbjct: 61 LYRIASFLQLKNYVQADEDCRHVLGEGLAKGEDAFRAVLCCMQLKGKLQPVSTILAKSLT 120
Query: 121 GESLNGMVTKDLTRLKTLLSETETATSNALSGYHVEDLDEGSCNGWHFRPPPRGITSSEE 180
GESLNGMVTKDLTRLKTLLSETETATSNALSGYHVEDLDEGSCNGWHFRPPPRGITSSEE
Sbjct: 121 GESLNGMVTKDLTRLKTLLSETETATSNALSGYHVEDLDEGSCNGWHFRPPPRGITSSEE 180
Query: 181 YTLCKRFLEQGICRYGAQCTSAHSQEELAEWQKRYASRLIKLKQQNENKQLSGSYMETLI 240
YTLCKRFLEQGICRYGAQCTSAHSQEELAEWQKRYASRLIKLKQQNENKQLSGSYMETLI
Sbjct: 181 YTLCKRFLEQGICRYGAQCTSAHSQEELAEWQKRYASRLIKLKQQNENKQLSGSYMETLI 240
Query: 241 EKWMNSLSPEKVLSECIEGVKVEHNPDLSVTVSTKKSHQTWTFALTCKPARMLYRVALLY 300
EKWMNSLSPEKVLSECIEGVKVEHNPDLSVTVSTKKSHQTWTFALTCKPARMLYRVALLY
Sbjct: 241 EKWMNSLSPEKVLSECIEGVKVEHNPDLSVTVSTKKSHQTWTFALTCKPARMLYRVALLY 300
Query: 301 DAHRPHFSIIAISAGDSTTQVSQEVPENCQEWIGGKMAQNGLDHYVYKVGIAFNTEIFGT 360
DAHRPHFSIIAISAGDSTTQVSQEVPENCQEWIGGKMAQNGLDHYVYKVGIAFNTEIFGT
Sbjct: 301 DAHRPHFSIIAISAGDSTTQVSQEVPENCQEWIGGKMAQNGLDHYVYKVGIAFNTEIFGT 360
Query: 361 FRQTIVFDFGLEPVLMQRVMIDAASTEDLEYLMHAKQQLVTTAKRWDSSSKTIIDFEPNE 420
FRQTIVFDFGLEPVLMQRVMIDAASTEDLEYLMHAKQQLVTTAKRWDSSSKTIIDFEPNE
Sbjct: 361 FRQTIVFDFGLEPVLMQRVMIDAASTEDLEYLMHAKQQLVTTAKRWDSSSKTIIDFEPNE 420
Query: 421 TTDLEKSLLIRYQIPLSADQLFTQSVLDKSLTKSNYQSRLHDLLYIEEIAQYKEISKFNL 480
TTDLEKSLLIRYQIPLSADQLFTQSVLDKSLTKSNYQSRLHDLLYIEEIAQYKEISKFNL
Sbjct: 421 TTDLEKSLLIRYQIPLSADQLFTQSVLDKSLTKSNYQSRLHDLLYIEEIAQYKEISKFNL 480
Query: 481 KVQLQILASFMLTGVSGGAKYAQNGQLFGRFKLTETLSEDTLAGRLVMTKVNAVYLLPVP 540
KVQLQILASFMLTGVSGGAKYAQNGQLFGRFKLTETLSEDTLAGRLVMTKVNAVYLLPVP
Sbjct: 481 KVQLQILASFMLTGVSGGAKYAQNGQLFGRFKLTETLSEDTLAGRLVMTKVNAVYLLPVP 540
Query: 541 KQKLVQTQGTKEKVYEATIEEKTKEYIFLRLSRECCEELNLRPDCDTQVELQFQLNRLPL 600
KQKLVQTQGTKEKVYEATIEEKTKEYIFLRLSRECCEELNLRPDCDTQVELQFQLNRLPL
Sbjct: 541 KQKLVQTQGTKEKVYEATIEEKTKEYIFLRLSRECCEELNLRPDCDTQVELQFQLNRLPL 600
Query: 601 CEMHYALDRIKDNGVLFPDISMTPTIPWSPNRQWDEQLDPRLNAKQKEAVLAITTPLAIQ 660
CEMHYALDRIKDNGVLFPDISMTPTIPWSPNRQWDEQLDPRLNAKQKEAVLAITTPLAIQ
Sbjct: 601 CEMHYALDRIKDNGVLFPDISMTPTIPWSPNRQWDEQLDPRLNAKQKEAVLAITTPLAIQ 660
Query: 661 LPPVLIIGPYGTGKTFTLAQAVKHILQQQETRILICTHSNSAADLYIKDYLHPYVEAGNP 720
LPPVLIIGPYGTGKTFTLAQAVKHILQQQETRILICTHSNSAADLYIKDYLHPYVEAGNP
Sbjct: 661 LPPVLIIGPYGTGKTFTLAQAVKHILQQQETRILICTHSNSAADLYIKDYLHPYVEAGNP 720
Query: 721 QARPLRVYFRNRWVKTVHPVVHQYCLISSAHSTFQMPQKEDILKHRVVVVTLNTSQYLCQ 780
QARPLRVYFRNRWVKTVHPVVHQYCLISSAHSTFQMPQKEDILKHRVVVVTLNTSQYLCQ
Sbjct: 721 QARPLRVYFRNRWVKTVHPVVHQYCLISSAHSTFQMPQKEDILKHRVVVVTLNTSQYLCQ 780
Query: 781 LDLEPGFFTHILLDEAAQAMECETIMPLALATQNTRIVLAGDHMQLSPFVYSEFARERNL 840
LDLEPGFFTHILLDEAAQAMECETIMPLALATQNTRIVLAGDHMQLSPFVYSEFARERNL
Sbjct: 781 LDLEPGFFTHILLDEAAQAMECETIMPLALATQNTRIVLAGDHMQLSPFVYSEFARERNL 840
Query: 841 HVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPAHKDFYPL 900
HVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPAHKDFYPL
Sbjct: 841 HVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPAHKDFYPL 900
Query: 901 TFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQV 960
TFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQV
Sbjct: 901 TFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQV 960
Query: 961 FRIRAELRKKRLSDVNVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKKKEQLLEDST 1020
FRIRAELRKKRLSDVNVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKKKEQLLEDST
Sbjct: 961 FRIRAELRKKRLSDVNVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKKKEQLLEDST 1020
Query: 1021 EDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFIALCHENSSLHGI 1080
EDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFIALCHENSSLHGI
Sbjct: 1021 EDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFIALCHENSSLHGI 1080
Query: 1081 TFEQIKAQLEALELKKTYVLNPLAPEFIPRALRLQHSGSTNKQQQSPPKGKSLHHTQNDH 1140
TFEQIKAQLEALELKKTYVLNPLAPEFIPRALRLQHSGSTNKQQQSPPKGKSLHHTQNDH
Sbjct: 1081 TFEQIKAQLEALELKKTYVLNPLAPEFIPRALRLQHSGSTNKQQQSPPKGKSLHHTQNDH 1140
Query: 1141 FQNDGIVQPNPSVLIGNPIRAYTPPPPLGPHPNLGKSPSPVQRIDPHTGTSILYVPAVYG 1200
FQNDGIVQPNPSVLIGNPIRAYTPPPPLGPHPNLGKSPSPVQRIDPHTGTSILYVPAVYG
Sbjct: 1141 FQNDGIVQPNPSVLIGNPIRAYTPPPPLGPHPNLGKSPSPVQRIDPHTGTSILYVPAVYG 1200
Query: 1201 GNVVMSVPLPVPWTGYQGRFAVDPRIITHQAAMAYNMNLLQTHGRGSPIPYGLGHHPPVT 1260
GNVVMSVPLPVPWTGYQGRFAVDPRIITHQAAMAYNMNLLQTHGRGSPIPYGLGHHPPVT
Sbjct: 1201 GNVVMSVPLPVPWTGYQGRFAVDPRIITHQAAMAYNMNLLQTHGRGSPIPYGLGHHPPVT 1260
Query: 1261 IGQPQNQHQEKDQHEQNRNGKSDTNNSGPEINKIRTPEKKPTEPKQVDLESNPQNRSPES 1320
IGQPQNQHQEKDQHEQNRNGKSDTNNSGPEINKIRTPEKKPTEPKQVDLESNPQNRSPES
Sbjct: 1261 IGQPQNQHQEKDQHEQNRNGKSDTNNSGPEINKIRTPEKKPTEPKQVDLESNPQNRSPES 1320
Query: 1321 RPSVVYPSTKFPRKDNLNPRHINLPLPAPHAQYAIPNRHFHPLPQLPRPPFPIPQQHTLL 1380
RPSVVYPSTKFPRKDNLNPRHINLPLPAPHAQYAIPNRHFHPLPQLPRPPFPIPQQHTLL
Sbjct: 1321 RPSVVYPSTKFPRKDNLNPRHINLPLPAPHAQYAIPNRHFHPLPQLPRPPFPIPQQHTLL 1380
Query: 1381 NQQQNNLPEQPNQIPPQPNQVVQQQSQLNQQPQQPPPQLSPAYQAGPNNAFFNSAVAHRP 1440
NQQQNNLPEQPNQIPPQPNQVVQQQSQLNQQPQQPPPQLSPAYQAGPNNAFFNSAVAHRP
Sbjct: 1381 NQQQNNLPEQPNQIPPQPNQVVQQQSQLNQQPQQPPPQLSPAYQAGPNNAFFNSAVAHRP 1440
Query: 1441 QSPPAEAVIPEQQPPPMLQEGHSPLRAIAQPGPILPSHLNSFIDENPSGLPIGEALDRIH 1500
QSPPAEAVIPEQQPPPMLQEGHSPLRAIAQPGPILPSHLNSFIDENPSGLPIGEALDRIH
Sbjct: 1441 QSPPAEAVIPEQQPPPMLQEGHSPLRAIAQPGPILPSHLNSFIDENPSGLPIGEALDRIH 1500
Query: 1501 GSVALETLRQQQARFQQWSEHHAFLSQGSVPYPHHHHPHLQHLPQPPLGLHQPPVRADWK 1560
GSVALETLRQQQARFQQWSEHHAFLSQGSVPYPHHHHPHLQHLPQPPLGLHQPPVRADWK
Sbjct: 1501 GSVALETLRQQQARFQQWSEHHAFLSQGSVPYPHHHHPHLQHLPQPPLGLHQPPVRADWK 1560
Query: 1561 LTSSAEDEVETTYSRFQDLIRELSHRDQSETRELAEMPPPQSRLLQYRQVQSRSPPAVPS 1620
LTSSAEDEVETTYSRFQDLIRELSHRDQSETRELAEMPPPQSRLLQYRQVQSRSPPAVPS
Sbjct: 1561 LTSSAEDEVETTYSRFQDLIRELSHRDQSETRELAEMPPPQSRLLQYRQVQSRSPPAVPS 1620
Query: 1621 PPSSTDHSSHFSNFNDNSRDIEVASNPAFPQRLPPQIFNSPFSLPSEHLAPPPLKYLAPD 1680
PPSSTDHSSHFSNFNDNSRDIEVASNPAFPQRLPPQIFNSPFSLPSEHLAPPPLKYLAPD
Sbjct: 1621 PPSSTDHSSHFSNFNDNSRDIEVASNPAFPQRLPPQIFNSPFSLPSEHLAPPPLKYLAPD 1680
Query: 1681 GAWTFANLQQNHLMGPGFPYGLPPLPHRPPQNPFVQIQNHQHAIGQEPFHPLSSRTVSSS 1740
GAWTFANLQQNHLMGPGFPYGLPPLPHRPPQNPFVQIQNHQHAIGQEPFHPLSSRTVSSS
Sbjct: 1681 GAWTFANLQQNHLMGPGFPYGLPPLPHRPPQNPFVQIQNHQHAIGQEPFHPLSSRTVSSS 1740
Query: 1741 SLPSLEEYEPRGPGRPLYQRRISSSSVQPCSEEVSTPQDSLAQCKELQDHSNQSSFNFSS 1800
SLPSLEEYEPRGPGRPLYQRRISSSSVQPCSEEVSTPQDSLAQCKELQDHSNQSSFNFSS
Sbjct: 1741 SLPSLEEYEPRGPGRPLYQRRISSSSVQPCSEEVSTPQDSLAQCKELQDHSNQSSFNFSS 1800
Query: 1801 PESWVNTTSSTPYQNIPCNGSSRTAQPRELIAPPKTVKPPEDQLKSENLEVSSSFNYSVL 1860
PESWVNTTSSTPYQNIPCNGSSRTAQPRELIAPPKTVKPPEDQLKSENLEVSSSFNYSVL
Sbjct: 1801 PESWVNTTSSTPYQNIPCNGSSRTAQPRELIAPPKTVKPPEDQLKSENLEVSSSFNYSVL 1860
Query: 1861 QHLGQFPPLMPNKQIAESANSSSPQSSAGGKPAMSYASALRAPPKPRPPPEQAKKSSDPL 1920
QHLGQFPPLMPNKQIAESANSSSPQSSAGGKPAMSYASALRAPPKPRPPPEQAKKSSDPL
Sbjct: 1861 QHLGQFPPLMPNKQIAESANSSSPQSSAGGKPAMSYASALRAPPKPRPPPEQAKKSSDPL 1920
Query: 1921 SLFQELSLGSSSGSNGFYSYFK 1942
SLFQELSLGSSSGSNGFYSYFK
Sbjct: 1921 SLFQELSLGSSSGSNGFYSYFK 1942
>gi|156105693 PPAR-alpha interacting complex protein 285 isoform 1
[Homo sapiens]
Length = 2649
Score = 482 bits (1240), Expect = e-135
Identities = 318/962 (33%), Positives = 500/962 (51%), Gaps = 80/962 (8%)
Query: 143 ETATSNALSGYHVEDLDEGSCNGWHFRPPPRGITSSEEYTLCKRFLEQGICRYGAQCTSA 202
E ++ S H + + W R PP G++ E LC + +C YG CT A
Sbjct: 53 EAFENHCASSEHAQMVAFDQALPWEHRSPPPGLSKFE---LCPK---PDLCEYGDACTKA 106
Query: 203 HSQEELAEWQKRYASRLIKLKQQNENKQLSGSYMETLIEKWMNSLSPEKVLSECIEGVKV 262
HS +EL EW +R ++ ++L+ Q + Y E L+ ++ S S VL+E ++GV+V
Sbjct: 107 HSAQELQEWVRR--TQAVELRGQAAWQDGLVPYQERLLAEYQRSSSEVLVLAETLDGVRV 164
Query: 263 EHNPDLSVTVSTKKSHQTWTFALTCKPARMLYRVALLYDAHRPHFSIIAISAGDSTTQVS 322
N L +K+ +WTFA+ + L VALL FS++A
Sbjct: 165 TCNQPLMYQAQERKTQYSWTFAVHSEEP--LLHVALLKQEPGADFSLVAPGLPPGRLYAR 222
Query: 323 QE---VPENCQEWIGGKMAQNGLDHYVYKVGIAFNTEIFGTFRQTIVFDFGLEPVLMQRV 379
E VP + + ++VG+ FGTF Q +VFDFG PVL+Q++
Sbjct: 223 GERFRVPSSTAD---------------FQVGVRVQAASFGTFEQWVVFDFGRRPVLLQKL 267
Query: 380 MIDAASTEDLEYLMHAKQQLVTTAKRWDSSSKTIIDFEPNETTDLEKSLLIRYQIPLSAD 439
+ + +RW + ++ ++ E T + +L+ +Y+ P A
Sbjct: 268 GLQLGQGRRPGPCRNLALGHPEEMERWHTGNRHVVPGV--ERTAEQTALMAKYKGPALAL 325
Query: 440 QLFTQSVLDKSLTKSNYQSRLHDLLYIEEIAQYKEISKFNLKVQLQILASFMLTGVSGGA 499
+ SV ++ +NY+ R+H LY EE AQ + ++K L+ Q+ + + ++
Sbjct: 326 EFNRSSVASGPISPTNYRQRMHQFLYEEEAAQQQLVAKLTLRGQVFLKTALQTPALN--M 383
Query: 500 KYAQNGQLFGRFKLTETLSEDTLAGRLVMTKVNAVYLLPVPKQKLVQTQGTKEKVYEATI 559
+A G L+ + +L DT G L+ V+ + PVP V+E +
Sbjct: 384 LFAPPGALYAEVPVPSSLMPDTDQGFLLGRAVSTALVAPVP--------APDNTVFEVRL 435
Query: 560 EEK--TKEYIFLRLSRECCEELNLRPDCDTQVELQFQLNRLPLCEMHYALDRIKDNGVLF 617
E + +++ ++L L CC L L+P+ +E+QFQ++ + H A+D + + ++
Sbjct: 436 ERRASSEQALWLLLPARCCLALGLQPEARLVLEVQFQIDPMTFRLWHQAVDTLPEEQLVV 495
Query: 618 PDISMTPTIPWSPNRQWDEQLDPRLNAKQKEAVLAIT---TPLAIQLPPVLIIGPYGTGK 674
PD+ T +P R W R N KQ+ AV I ++PP+LI GP+GTGK
Sbjct: 496 PDLP-TCALP----RPWSVPPLRRGNRKQELAVALIAGWGPGDGRRVPPLLIYGPFGTGK 550
Query: 675 TFTLAQAVKHILQQQETRILICTHSNSAADLYIKDYLHPYVEAGNPQARPLRVYFRNRWV 734
T+TLA A ++++ ET++LICTH+NSAAD+YI++Y H +V G+P+A PLRV + +R +
Sbjct: 551 TYTLAMASLEVIRRPETKVLICTHTNSAADIYIREYFHSHVSGGHPEATPLRVMYTDRPL 610
Query: 735 KTVHPVVHQYCLISSAHSTFQMPQKEDILKHRVVVVTLNTSQYLCQLDLEPGFFTHILLD 794
PV QYC ++ F+ P + ++ +HRVVV T + ++ +L + GFF+HIL+D
Sbjct: 611 SQTDPVTLQYCCLTDDRQAFRPPTRAELARHRVVVTTTSQAR---ELRVPVGFFSHILID 667
Query: 795 EAAQAMECETIMPLALATQNTRIVLAGDHMQLSPFVYSEFARERNLHVSLLDRLYEHYPA 854
EAAQ +ECE + PLA A+ TR+VLAGDHMQ++P ++S AR R +LL RL+ Y
Sbjct: 668 EAAQMLECEALTPLAYASHGTRLVLAGDHMQVTPRLFS-VARARAAEHTLLHRLFLCYQQ 726
Query: 855 EF-----PCRILLCENYRSHEAIINYTSELFYEGK---LMASGKQPAHKDFYPLTFFTAR 906
E R++ ENYR +AI+++ S FY K + A GK P H YPL F
Sbjct: 727 ETHEVARQSRLVFHENYRCTDAIVSFISRHFYVAKGNPIHARGKVPPHPRHYPLMFCHVA 786
Query: 907 GEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQVFRIRAE 966
G ++ + ++ N AE+ +VVE+V+E WP WG + I VV+ + QV +R E
Sbjct: 787 GSPDRDMSMASWLNLAEIAQVVEKVQEAYNTWPSCWGGREQRCICVVS-HGAQVSALRQE 845
Query: 967 LRKKRLSDVNVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKKKEQLLEDSTEDLDYG 1026
LR++ L V+V + G+QFRV+ LSTV HTC+ +P L
Sbjct: 846 LRRRDLGQVSVGSFEILPGRQFRVVVLSTV---HTCQSLLSP------------GALAPE 890
Query: 1027 FLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFIALCHENSSL--HGITFEQ 1084
F ++ ++LNT +TRAQS + VVGD +ALCS G C K WE FI C E S+ G++ EQ
Sbjct: 891 FFTDARVLNTVLTRAQSQLVVVGDAVALCSFGACGKLWESFIRECVERHSVCPEGLSMEQ 950
Query: 1085 IK 1086
++
Sbjct: 951 VE 952
Score = 113 bits (282), Expect = 2e-24
Identities = 100/336 (29%), Positives = 149/336 (44%), Gaps = 45/336 (13%)
Query: 758 QKEDILKHRVVVVTLN--TSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLALATQNT 815
+K ++ +H V++ T + S L LD+ IL+DEA A E ET++PL Q
Sbjct: 2327 RKFELDRHEVILCTCSCAASASLKILDVR-----QILVDEAGMATEPETLIPLVQFPQAE 2381
Query: 816 RIVLAGDHMQLSPFVYSEFARERNLHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINY 875
++VL GDH QL P V +E + L SL +R +E +L YR HE I +
Sbjct: 2382 KVVLLGDHKQLRPVVKNERLQNLGLDRSLFERYHED-------AHMLDTQYRMHEGICAF 2434
Query: 876 TSELFYEGKLMA--------SGKQPAHKDFYPLTFFTARGED------VQEKNSTAFYNN 921
S FY+ KL S A K+ P+ F +G + E N + N
Sbjct: 2435 PSVAFYKSKLKTWQGLRRPPSVLGHAGKESCPVIFGHVQGHERSLLVSTDEGNENSKANL 2494
Query: 922 AEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQVFRIRAELRKKRLSDVNVERVL 981
EV EVV ++L ++ I V+TPY Q I LR++ ++ V V +
Sbjct: 2495 EEVAEVVRITKQL-----TLGRTVEPQDIAVLTPYNAQASEISKALRREGIAGVAVSSIT 2549
Query: 982 NVQGKQFRVLFLSTVRTRHTCKHKQTPIKKKEQLLEDSTEDLDYGFLSNYKLLNTAITRA 1041
QG ++R + +STVRT Q P K S GF+ + +N A+TRA
Sbjct: 2550 KSQGSEWRYVLVSTVRTCAKSDLDQRPTK--------SWLKKFLGFVVDPNQVNVAVTRA 2601
Query: 1042 QSLVAVVGDPIALCSIGRCRKFWERFIALCHENSSL 1077
Q + ++GD + L RC W + C +L
Sbjct: 2602 QEGLCLIGDHLLL----RCCPLWRSLLDFCEAQQTL 2633
>gi|156105695 PPAR-alpha interacting complex protein 285 isoform 2
[Homo sapiens]
Length = 2080
Score = 272 bits (696), Expect = 2e-72
Identities = 160/398 (40%), Positives = 233/398 (58%), Gaps = 30/398 (7%)
Query: 699 SNSAADLYIKDYLHPYVEAGNPQARPLRVYFRNRWVKTVHPVVHQYCLISSAHSTFQMPQ 758
S SAAD+YI++Y H +V G+P+A PLRV + +R + PV QYC ++ F+ P
Sbjct: 6 SRSAADIYIREYFHSHVSGGHPEATPLRVMYTDRPLSQTDPVTLQYCCLTDDRQAFRPPT 65
Query: 759 KEDILKHRVVVVTLNTSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLALATQNTRIV 818
+ ++ +HRVVV T + ++ +L + GFF+HIL+DEAAQ +ECE + PLA A+ TR+V
Sbjct: 66 RAELARHRVVVTTTSQAR---ELRVPVGFFSHILIDEAAQMLECEALTPLAYASHGTRLV 122
Query: 819 LAGDHMQLSPFVYSEFARERNLHVSLLDRLYEHYPAEF-----PCRILLCENYRSHEAII 873
LAGDHMQ++P ++S AR R +LL RL+ Y E R++ ENYR +AI+
Sbjct: 123 LAGDHMQVTPRLFS-VARARAAEHTLLHRLFLCYQQETHEVARQSRLVFHENYRCTDAIV 181
Query: 874 NYTSELFYEGK---LMASGKQPAHKDFYPLTFFTARGEDVQEKNSTAFYNNAEVFEVVER 930
++ S FY K + A GK P H YPL F G ++ + ++ N AE+ +VVE+
Sbjct: 182 SFISRHFYVAKGNPIHARGKVPPHPRHYPLMFCHVAGSPDRDMSMASWLNLAEIAQVVEK 241
Query: 931 VEELRRKWPVAWGKLDDGSIGVVTPYADQVFRIRAELRKKRLSDVNVERVLNVQGKQFRV 990
V+E WP WG + I VV+ + QV +R ELR++ L V+V + G+QFRV
Sbjct: 242 VQEAYNTWPSCWGGREQRCICVVS-HGAQVSALRQELRRRDLGQVSVGSFEILPGRQFRV 300
Query: 991 LFLSTVRTRHTCKHKQTPIKKKEQLLEDSTEDLDYGFLSNYKLLNTAITRAQSLVAVVGD 1050
+ LSTV HTC+ +P L F ++ ++LNT +TRAQS + VVGD
Sbjct: 301 VVLSTV---HTCQSLLSP------------GALAPEFFTDARVLNTVLTRAQSQLVVVGD 345
Query: 1051 PIALCSIGRCRKFWERFIALCHENSSL--HGITFEQIK 1086
+ALCS G C K WE FI C E S+ G++ EQ++
Sbjct: 346 AVALCSFGACGKLWESFIRECVERHSVCPEGLSMEQVE 383
Score = 113 bits (282), Expect = 2e-24
Identities = 100/336 (29%), Positives = 149/336 (44%), Gaps = 45/336 (13%)
Query: 758 QKEDILKHRVVVVTLN--TSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLALATQNT 815
+K ++ +H V++ T + S L LD+ IL+DEA A E ET++PL Q
Sbjct: 1758 RKFELDRHEVILCTCSCAASASLKILDVR-----QILVDEAGMATEPETLIPLVQFPQAE 1812
Query: 816 RIVLAGDHMQLSPFVYSEFARERNLHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINY 875
++VL GDH QL P V +E + L SL +R +E +L YR HE I +
Sbjct: 1813 KVVLLGDHKQLRPVVKNERLQNLGLDRSLFERYHED-------AHMLDTQYRMHEGICAF 1865
Query: 876 TSELFYEGKLMA--------SGKQPAHKDFYPLTFFTARGED------VQEKNSTAFYNN 921
S FY+ KL S A K+ P+ F +G + E N + N
Sbjct: 1866 PSVAFYKSKLKTWQGLRRPPSVLGHAGKESCPVIFGHVQGHERSLLVSTDEGNENSKANL 1925
Query: 922 AEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQVFRIRAELRKKRLSDVNVERVL 981
EV EVV ++L ++ I V+TPY Q I LR++ ++ V V +
Sbjct: 1926 EEVAEVVRITKQL-----TLGRTVEPQDIAVLTPYNAQASEISKALRREGIAGVAVSSIT 1980
Query: 982 NVQGKQFRVLFLSTVRTRHTCKHKQTPIKKKEQLLEDSTEDLDYGFLSNYKLLNTAITRA 1041
QG ++R + +STVRT Q P K S GF+ + +N A+TRA
Sbjct: 1981 KSQGSEWRYVLVSTVRTCAKSDLDQRPTK--------SWLKKFLGFVVDPNQVNVAVTRA 2032
Query: 1042 QSLVAVVGDPIALCSIGRCRKFWERFIALCHENSSL 1077
Q + ++GD + L RC W + C +L
Sbjct: 2033 QEGLCLIGDHLLL----RCCPLWRSLLDFCEAQQTL 2064
>gi|14251207 MOV10-like 1 [Homo sapiens]
Length = 1211
Score = 194 bits (492), Expect = 9e-49
Identities = 217/764 (28%), Positives = 333/764 (43%), Gaps = 102/764 (13%)
Query: 351 IAFNTEIFGTFRQTIVFDFGLEPVLMQRVMIDAASTEDLEYLMHAKQQLVTTAKRWDSSS 410
+ F+ + G + + V G E ++ R + + L AK +V TA++ +S
Sbjct: 431 LCFSDFLIGRYLEVNVIS-GEESLIAAREPFSWKKLKSSQALTSAKTTVVVTAQK-RNSR 488
Query: 411 KTIIDFEPNETTDLEKSLLIRYQIPLSADQLFTQSVLDKSLTKSNYQSRLHDLLYIEEIA 470
+ + F P + +I D L Q +L + L SNY+ + LL++EEI
Sbjct: 489 RQLPSFLPQYPIPDRLRKCVEQKI----DILTFQPLLAELLNMSNYKEKFSTLLWLEEIY 544
Query: 471 QYKEISKFNLK-VQLQILASFMLTGVSGGAK-----YA----------QNGQLFGRFKLT 514
E+ ++N+ + L+ ++ V G A+ YA NG
Sbjct: 545 AEMELKEYNMSGIILRRNGDLLVLEVPGLAEGRPSLYAGDKLILKTQEYNGHAIEYISYV 604
Query: 515 ETLSEDTLAGRLVMTKVNAVYLLPVPKQKLVQTQGTK------EKVYEATIEEKTKEYIF 568
+ E+ + ++ A P+ + ++ E V ++ E I
Sbjct: 605 TEIHEEDVTLKINPEFEQAYNFEPMDVEFTYNRTTSRRCHFALEHVIHLGVKVLFPEEII 664
Query: 569 LRLSRECCEELNLRPDCDTQVELQFQLNRLPLCEM--HYALDRI---KDNGVLFP---DI 620
L+ S + N D + + + NR + + H +R KD VL P ++
Sbjct: 665 LQ-SPQVTGNWNHAQDTKSSGQSTSKKNRKTMTDQAEHGTEERRVGDKDLPVLAPFTAEM 723
Query: 621 SMTPTIPWSPNRQWDEQLDPRLNAKQKEAVLAITTPLAIQLPPVLIIGPYGTGKTFTLAQ 680
S +P + E +P LN QK AV I + LP +L GP GTGKT T+ +
Sbjct: 724 SDWVDEIQTPKARKMEFFNPVLNENQKLAVKRILSGDCRPLPYILF-GPPGTGKTVTIIE 782
Query: 681 AVKHI-LQQQETRILICTHSNSAADLYIKDYLHPYVEAGNPQARPLRVYFRNRWVKTVHP 739
AV + ++RIL+C SNSAADL L + A +RV R+ + V
Sbjct: 783 AVLQVHFALPDSRILVCAPSNSAADLVC---LRLHESKVLQPATMVRVNATCRFEEIVID 839
Query: 740 VVHQYCLISSAHSTFQMPQKEDILK---HRVVVVTLNTSQYLCQLDLEPGFFTHILLDEA 796
V YC EDI K R+++ T ++S Q+ + G FTH+ +DEA
Sbjct: 840 AVKPYCR-----------DGEDIWKASRFRIIITTCSSSGLFYQIGVRVGHFTHVFVDEA 888
Query: 797 AQAMECETIMPLALATQ-NTRIVLAGDHMQLSPFVYSEFARERNLHVSLLDRL-----YE 850
QA E E ++PL L + + +IVLAGD MQL P + S A L+VS L+RL Y+
Sbjct: 889 GQASEPECLIPLGLMSDISGQIVLAGDPMQLGPVIKSRLAMAYGLNVSFLERLMSRPAYQ 948
Query: 851 HYPAEF-------PCRIL-LCENYRSHEAIINYTSELFYEGKLMAS----------GKQP 892
F P + L +NYRSHEA++ S LFY +L G +
Sbjct: 949 RDENAFGACGAHNPLLVTKLVKNYRSHEALLMLPSRLFYHRELEVCADPTVVTSLLGWEK 1008
Query: 893 AHKDFYPLTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGV 952
K +PL F RG + +E S +++N AE +V+ L ++ IGV
Sbjct: 1009 LPKKGFPLIFHGVRGSEAREGKSPSWFNPAEAVQVLRYCCLLAHSIS---SQVSASDIGV 1065
Query: 953 VTPYADQVFRIRAELRKKRLSDVNVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKKK 1012
+TPY QV +IR LR L D+ V V QG+++ V+ +STVR+
Sbjct: 1066 ITPYRKQVEKIRILLRNVDLMDIKVGSVEEFQGQEYLVIIISTVRSN------------- 1112
Query: 1013 EQLLEDSTEDLDY--GFLSNYKLLNTAITRAQSLVAVVGDPIAL 1054
ED ED Y GFLSN K N AITR ++L+ V+G+P L
Sbjct: 1113 ----EDRFEDDRYFLGFLSNSKRFNVAITRPKALLIVLGNPHVL 1152
>gi|194272168 Mov10, Moloney leukemia virus 10, homolog [Homo sapiens]
Length = 1003
Score = 180 bits (456), Expect = 1e-44
Identities = 162/570 (28%), Positives = 266/570 (46%), Gaps = 79/570 (13%)
Query: 590 ELQFQLNRLPLCEMHYALDRIKDNGVLFPDI-SMTPT-IPWSPN----RQWDEQLDPRLN 643
++ F NR PL H AL+ + +L+P + + P +P P+ + +D L+ N
Sbjct: 444 KVNFTFNRQPLRVQHRALE-LTGRWLLWPMLFPVAPRDVPLLPSDVKLKLYDRSLES--N 500
Query: 644 AKQKEAVLAITTPLAIQLPPVLIIGPYGTGKTFTLAQAVKHILQQ-QETRILICTHSNSA 702
+Q +A+ I T + P +I GP GTGKT TL +A+K +++ + IL C SNS
Sbjct: 501 PEQLQAMRHIVTGTT-RPAPYIIFGPPGTGKTVTLVEAIKQVVKHLPKAHILACAPSNSG 559
Query: 703 ADLYIKDYLHPYVEAGNPQARPLRVYFRNRWVKTVHPVVHQYCLISSAHSTFQMPQKEDI 762
ADL + L ++ + R+ +R ++ V + C + + P K+ +
Sbjct: 560 ADLLCQR-LRVHLPSSI-----YRLLAPSRDIRMVPEDIKPCCNWDAKKGEYVFPAKKKL 613
Query: 763 LKHRVVVVTLNTSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLA--LATQNT----- 815
++RV++ TL T+ L FTHI +DEA ME E+++ +A + + T
Sbjct: 614 QEYRVLITTLITAGRLVSAQFPIDHFTHIFIDEAGHCMEPESLVAIAGLMEVKETGDPGG 673
Query: 816 RIVLAGDHMQLSPFVYSEFARERNLHVSLLDRLYEH----------YPAEFPCRILLCEN 865
++VLAGD QL P + S ++ L SLL+RL + Y +F ++L N
Sbjct: 674 QLVLAGDPRQLGPVLRSPLTQKHGLGYSLLERLLTYNSLYKKGPDGYDPQFITKLL--RN 731
Query: 866 YRSHEAIINYTSELFYEGKLMASGKQPAHKDF----------YPLTFFTARGEDVQEKNS 915
YRSH I++ ++L+YEG+L A + F +P+ F G+D +E NS
Sbjct: 732 YRSHPTILDIPNQLYYEGELQACADVVDRERFCRWAGLPRQGFPIIFHGVMGKDEREGNS 791
Query: 916 TAFYNNAEVFEVVERVE-ELRRKWPVAWGKLDDGSIGVVTPYADQVFRIR-------AEL 967
+F+N E V ++ L +L S+GV++PY QV +IR EL
Sbjct: 792 PSFFNPEEAATVTSYLKLLLAPSSKKGKARLSPRSVGVISPYRKQVEKIRYCITKLDREL 851
Query: 968 R-KKRLSDVNVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKKKEQLLEDSTEDLDYG 1026
R + D+ V V QG++ V+ +STVR+ Q D + G
Sbjct: 852 RGLDDIKDLKVGSVEEFQGQERSVILISTVRS--------------SQSFVQLDLDFNLG 897
Query: 1027 FLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFIALCHENSSLHGITF---- 1082
FL N K N A+TRA++L+ +VG+P+ L W+ F+ C EN G F
Sbjct: 898 FLKNPKRFNVAVTRAKALLIIVGNPLLLGH----DPDWKVFLEFCKENGGYTGCPFPAKL 953
Query: 1083 --EQIKAQLEALELKKTYVLNPLAPEFIPR 1110
+Q + L+ L P + +++P+
Sbjct: 954 DLQQGQNLLQGLSKLSPSTSGPHSHDYLPQ 983
>gi|14211540 Mov10, Moloney leukemia virus 10, homolog [Homo sapiens]
Length = 1003
Score = 180 bits (456), Expect = 1e-44
Identities = 162/570 (28%), Positives = 266/570 (46%), Gaps = 79/570 (13%)
Query: 590 ELQFQLNRLPLCEMHYALDRIKDNGVLFPDI-SMTPT-IPWSPN----RQWDEQLDPRLN 643
++ F NR PL H AL+ + +L+P + + P +P P+ + +D L+ N
Sbjct: 444 KVNFTFNRQPLRVQHRALE-LTGRWLLWPMLFPVAPRDVPLLPSDVKLKLYDRSLES--N 500
Query: 644 AKQKEAVLAITTPLAIQLPPVLIIGPYGTGKTFTLAQAVKHILQQ-QETRILICTHSNSA 702
+Q +A+ I T + P +I GP GTGKT TL +A+K +++ + IL C SNS
Sbjct: 501 PEQLQAMRHIVTGTT-RPAPYIIFGPPGTGKTVTLVEAIKQVVKHLPKAHILACAPSNSG 559
Query: 703 ADLYIKDYLHPYVEAGNPQARPLRVYFRNRWVKTVHPVVHQYCLISSAHSTFQMPQKEDI 762
ADL + L ++ + R+ +R ++ V + C + + P K+ +
Sbjct: 560 ADLLCQR-LRVHLPSSI-----YRLLAPSRDIRMVPEDIKPCCNWDAKKGEYVFPAKKKL 613
Query: 763 LKHRVVVVTLNTSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLA--LATQNT----- 815
++RV++ TL T+ L FTHI +DEA ME E+++ +A + + T
Sbjct: 614 QEYRVLITTLITAGRLVSAQFPIDHFTHIFIDEAGHCMEPESLVAIAGLMEVKETGDPGG 673
Query: 816 RIVLAGDHMQLSPFVYSEFARERNLHVSLLDRLYEH----------YPAEFPCRILLCEN 865
++VLAGD QL P + S ++ L SLL+RL + Y +F ++L N
Sbjct: 674 QLVLAGDPRQLGPVLRSPLTQKHGLGYSLLERLLTYNSLYKKGPDGYDPQFITKLL--RN 731
Query: 866 YRSHEAIINYTSELFYEGKLMASGKQPAHKDF----------YPLTFFTARGEDVQEKNS 915
YRSH I++ ++L+YEG+L A + F +P+ F G+D +E NS
Sbjct: 732 YRSHPTILDIPNQLYYEGELQACADVVDRERFCRWAGLPRQGFPIIFHGVMGKDEREGNS 791
Query: 916 TAFYNNAEVFEVVERVE-ELRRKWPVAWGKLDDGSIGVVTPYADQVFRIR-------AEL 967
+F+N E V ++ L +L S+GV++PY QV +IR EL
Sbjct: 792 PSFFNPEEAATVTSYLKLLLAPSSKKGKARLSPRSVGVISPYRKQVEKIRYCITKLDREL 851
Query: 968 R-KKRLSDVNVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKKKEQLLEDSTEDLDYG 1026
R + D+ V V QG++ V+ +STVR+ Q D + G
Sbjct: 852 RGLDDIKDLKVGSVEEFQGQERSVILISTVRS--------------SQSFVQLDLDFNLG 897
Query: 1027 FLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFIALCHENSSLHGITF---- 1082
FL N K N A+TRA++L+ +VG+P+ L W+ F+ C EN G F
Sbjct: 898 FLKNPKRFNVAVTRAKALLIIVGNPLLLGH----DPDWKVFLEFCKENGGYTGCPFPAKL 953
Query: 1083 --EQIKAQLEALELKKTYVLNPLAPEFIPR 1110
+Q + L+ L P + +++P+
Sbjct: 954 DLQQGQNLLQGLSKLSPSTSGPHSHDYLPQ 983
>gi|18375673 regulator of nonsense transcripts 1 [Homo sapiens]
Length = 1118
Score = 117 bits (293), Expect = 1e-25
Identities = 148/591 (25%), Positives = 237/591 (40%), Gaps = 105/591 (17%)
Query: 640 PRLNAKQKEAVLAITTPLAIQLPPVLIIGPYGTGKTFTLAQAVKHILQQQETRILICTHS 699
P LN Q AV + +Q P LI GP GTGKT T A V H+ +Q +L+C S
Sbjct: 469 PDLNHSQVYAVKTV-----LQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPS 523
Query: 700 NSAADLYIKDYLHPYVEAGNPQARPLRVYFRNRWVKTVHPVVHQYCLISSAHSTFQMPQK 759
N A D + + +H + +R+ ++R + + V L + + MP+
Sbjct: 524 NIAVD-QLTEKIH------QTGLKVVRLCAKSR--EAIDSPVSFLALHNQIRNMDSMPEL 574
Query: 760 EDI--------------------LKHRVVVVTLNTSQYLCQLDLEPGF-------FTHIL 792
+ + LK L + +C + G F IL
Sbjct: 575 QKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSIL 634
Query: 793 LDEAAQAMECETIMPLALATQNTRIVLAGDHMQLSPFVYSEFARERNLHVSLLDRLYEHY 852
+DE+ QA E E ++P+ L + +++L GDH QL P V + A + L SL +RL
Sbjct: 635 IDESTQATEPECMVPVVLGAK--QLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLV--V 690
Query: 853 PAEFPCRILLCENYRSHEAIINYTSELFYEGKLM----ASGKQPAHKDFY------PLTF 902
P R+ + YR H A+ + S +FYEG L A+ + DF P+ F
Sbjct: 691 LGIRPIRLQV--QYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFF 748
Query: 903 FTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQ--- 959
+ +G++ + T++ N E VE++ K A K D IG++TPY Q
Sbjct: 749 YVTQGQEEIASSGTSYLNRTEA----ANVEKITTKLLKAGAKPDQ--IGIITPYEGQRSY 802
Query: 960 ---VFRIRAELRKKRLSDVNVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKKKEQLL 1016
+ L K +V + V QG++ + LS VR
Sbjct: 803 LVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVR------------------- 843
Query: 1017 EDSTEDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFIALCHENSS 1076
+ E GFL++ + LN A+TRA+ V +VG+P AL + W + E
Sbjct: 844 --ANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSK----QPLWNHLLNYYKEQKV 897
Query: 1077 LHGITFEQIKAQLEALELKKTYV--LNPLAPEFIPRAL---RLQHSGSTNKQQQSPPKGK 1131
L ++ L + V +NP A F+ A+ R + + S +
Sbjct: 898 LVEGPLNNLRESLMQFSKPRKLVNTINPGA-RFMTTAMYDAREAIIPGSVYDRSSQGRPS 956
Query: 1132 SLHHTQNDHFQNDGIVQPNPS--VLIGNPIRAYTPPPPLGPHPNLGKSPSP 1180
S++ +D G++ PS + PI PP+ P G++ P
Sbjct: 957 SMYFQTHDQI---GMISAGPSHVAAMNIPIPFNLVMPPMPPPGYFGQANGP 1004
>gi|119392094 immunoglobulin mu binding protein 2 [Homo sapiens]
Length = 993
Score = 85.5 bits (210), Expect = 5e-16
Identities = 126/476 (26%), Positives = 191/476 (40%), Gaps = 121/476 (25%)
Query: 642 LNAKQKEAVLAITTPLAIQLPPVLIIGPYGTGKTFTLA----QAVKHILQ---------- 687
L+ QKEAVL + Q +I GP GTGKT T+ QAVK L+
Sbjct: 192 LDTSQKEAVLFALS----QKELAIIHGPPGTGKTTTVVEIILQAVKQGLKVLCCAPSNIA 247
Query: 688 ----------------------------QQETRILICTHSNSA---ADLYIKDYLHPYVE 716
QQ + + S+SA AD+ KD +V+
Sbjct: 248 VDNLVERLALCKQRILRLGHPARLLESIQQHSLDAVLARSDSAQIVADIR-KDIDQVFVK 306
Query: 717 AGNPQARPLRVYFRNRWVKTVHPVVHQYCLISSAHSTFQMPQKEDILKHRVVVVTLNTSQ 776
Q + + FRN +K + + + + E + VV+ T +
Sbjct: 307 NKKTQDKREKSNFRNE-IKLLRKELKE---------REEAAMLESLTSANVVLATNTGAS 356
Query: 777 YLCQLDLEP-GFFTHILLDEAAQAMECETIMPLALATQNTRIVLAGDHMQLSPFVYSEFA 835
L L P +F +++DE AQA+E +PL A + +LAGDH QL P S A
Sbjct: 357 ADGPLKLLPESYFDVVVIDECAQALEASCWIPLLKAR---KCILAGDHKQLPPTTVSHKA 413
Query: 836 RERNLHVSLLDRLYEHYPAEFPCRIL--LCENYRSHEAIINYTSELFYEGKLMASGKQPA 893
L +SL++RL E Y A R++ L YR H+AI+ + S+ Y G+L A
Sbjct: 414 ALAGLSLSLMERLAEEYGA----RVVRTLTVQYRMHQAIMRWASDTMYLGQLTAHSSVAR 469
Query: 894 H------------KDFYPLTFFTARG---EDVQEKNSTAFYNNAEVFEVVERVEELRRKW 938
H + PL G +++E++ + N EV V ++ L
Sbjct: 470 HLLRDLPGVAATEETGVPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVSLHIQAL---- 525
Query: 939 PVAWGKLDDG----SIGVVTPYADQVFRIRAELRKKRLSDVNVERVLNVQGKQFRVLFLS 994
+D G I VV+PY QV +R L R ++ ++ V QG++ + LS
Sbjct: 526 ------VDAGVPARDIAVVSPYNLQVDLLRQSL-VHRHPELEIKSVDGFQGREKEAVILS 578
Query: 995 TVRTRHTCKHKQTPIKKKEQLLEDSTEDLDYGFLSNYKLLNTAITRAQSLVAVVGD 1050
VR S + GFL+ + +N A+TRA+ VAV+ D
Sbjct: 579 FVR---------------------SNRKGEVGFLAEDRRINVAVTRARRHVAVICD 613
>gi|122937299 DNA replication helicase 2 homolog [Homo sapiens]
Length = 1146
Score = 80.1 bits (196), Expect = 2e-14
Identities = 107/440 (24%), Positives = 184/440 (41%), Gaps = 82/440 (18%)
Query: 642 LNAKQKEAVLAITTPLAIQLPPVLIIGPYGTGKTFTLAQAVKHILQQQETRILICTHSNS 701
LN Q++A+ + + LI+G GTGKT T+ V+ IL +L+ ++++S
Sbjct: 712 LNKPQRQAMKKVL----LSKDYTLIVGMPGTGKTTTICTLVR-ILYACGFSVLLTSYTHS 766
Query: 702 AAD---LYIKDYLHPYVEAGNPQARPLRVYFRNRWVKTVHPVVHQYCL--ISSAHSTFQM 756
A D L + + ++ G ++ VHP + Q+ I + S +
Sbjct: 767 AVDNILLKLAKFKIGFLRLGQ--------------IQKVHPAIQQFTEQEICRSKSIKSL 812
Query: 757 PQKEDILKHRVVVVTLNTSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLALATQNTR 816
E++ +++V T T + F ++DEA+Q + + PL + R
Sbjct: 813 ALLEELYNSQLIVAT--TCMGINHPIFSRKIFDFCIVDEASQISQPICLGPLFFSR---R 867
Query: 817 IVLAGDHMQLSPFVYSEFARERNLHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYT 876
VL GDH QL P V + AR + SL RL ++ A + L YR + I++ +
Sbjct: 868 FVLVGDHQQLPPLVLNREARALGMSESLFKRLEQNKSAV----VQLTVQYRMNSKIMSLS 923
Query: 877 SELFYEGKLMASGKQPAH--------KDF-YPLTFFTARGED-----VQEKNSTAFYNNA 922
++L YEGKL + A+ KD L F+ ++ V E N+ + N
Sbjct: 924 NKLTYEGKLECGSDKVANAVINLRHFKDVKLELEFYADYSDNPWLMGVFEPNNPVCFLNT 983
Query: 923 EVFEVVERVEE------LRRKWPVAWGKL------DDGSIGVVTPYADQVFRIRAELRKK 970
+ E+VE+ K V + IG++ PY Q+ +I +L +
Sbjct: 984 DKVPAPEQVEKGGVSNVTEAKLIVFLTSIFVKAGCSPSDIGIIAPYRQQL-KIINDLLAR 1042
Query: 971 RLSDVNVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKKKEQLLEDSTEDLDYG-FLS 1029
+ V V V QG+ ++ +S VR S +D G L
Sbjct: 1043 SIGMVEVNTVDKYQGRDKSIVLVSFVR---------------------SNKDGTVGELLK 1081
Query: 1030 NYKLLNTAITRAQSLVAVVG 1049
+++ LN AITRA+ + ++G
Sbjct: 1082 DWRRLNVAITRAKHKLILLG 1101
>gi|113722133 senataxin [Homo sapiens]
Length = 2677
Score = 68.6 bits (166), Expect = 6e-11
Identities = 82/320 (25%), Positives = 138/320 (43%), Gaps = 60/320 (18%)
Query: 757 PQKED---ILKHRVVVVTLNTSQYLCQLDLEPGF-------FTHILLDEAAQAMECETIM 806
PQK IL+ ++ TL+TS L LE F F+ +++DEA Q+ E ET+
Sbjct: 2137 PQKTQSIIILESHIICCTLSTSGGLL---LESAFRGQGGVPFSCVIVDEAGQSCEIETLT 2193
Query: 807 PLALATQNTRIVLAGDHMQLSPFVYSEFARERNLHVS-------LLDRLYEHYPAEFPCR 859
P L + +++L GD QL P V S A+E S LL+ EH
Sbjct: 2194 P--LIHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMARFCRLLEENVEHNMISRLPI 2251
Query: 860 ILLCENYRSHEAIINYTSELFYEGKLMASGKQPAHK-----DFYPLTFFTARGEDVQEKN 914
+ L YR H I + S Y L + + A + F P F G+ + ++
Sbjct: 2252 LQLTVQYRMHPDICLFPSNYVYNRNLKTNRQTEAIRCSSDWPFQPYLVFDV-GDGSERRD 2310
Query: 915 STAFYNNAE---VFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQVFRIRAELRKK- 970
+ ++ N E V E+++ +++ R+ + +IG++T Y Q I+ +L K+
Sbjct: 2311 NDSYINVQEIKLVMEIIKLIKDKRK-------DVSFRNIGIITHYKAQKTMIQKDLDKEF 2363
Query: 971 -RLSDVNVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKKKEQLLEDSTEDLDYGFLS 1029
R V+ V QG+Q + ++ VR ++ GFL+
Sbjct: 2364 DRKGPAEVDTVDAFQGRQKDCVIVTCVRA--------------------NSIQGSIGFLA 2403
Query: 1030 NYKLLNTAITRAQSLVAVVG 1049
+ + LN ITRA+ + ++G
Sbjct: 2404 SLQRLNVTITRAKYSLFILG 2423
Score = 33.5 bits (75), Expect = 2.1
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 15/76 (19%)
Query: 665 LIIGPYGTGKTFTLAQAVKHILQQ---------------QETRILICTHSNSAADLYIKD 709
LI GP GTGK+ T+ + +L + ++ R+L+C SN+A D +K
Sbjct: 1960 LIHGPPGTGKSKTIVGLLYRLLTENQRKGHSDENSNAKIKQNRVLVCAPSNAAVDELMKK 2019
Query: 710 YLHPYVEAGNPQARPL 725
+ + E + PL
Sbjct: 2020 IILEFKEKCKDKKNPL 2035
>gi|19718731 bromodomain-containing protein 4 isoform long [Homo
sapiens]
Length = 1362
Score = 65.1 bits (157), Expect = 6e-10
Identities = 140/583 (24%), Positives = 191/583 (32%), Gaps = 110/583 (18%)
Query: 1359 HFHPLPQLPRPPFPIPQQHTLLNQQQNNLPEQPNQIPPQPNQVVQQQSQLNQQPQQPPPQ 1418
H H Q+ + P P+PQQ P P Q PP P QQQ P P Q
Sbjct: 739 HHHHHQQMQQAPAPVPQQP----------PPPPQQPPPPPPPQQQQQPPPPPPPPSMPQQ 788
Query: 1419 LSPAYQAGPNNAFFNSAVAHRPQSPPA--EAVIPEQQPPPMLQEGHSPLRAIAQPGPILP 1476
+PA ++ P PQ P + + + QP L + P P P
Sbjct: 789 AAPAMKSSPPPFIATQVPVLEPQLPGSVFDPIGHFTQPILHLPQPELPPHLPQPPEHSTP 848
Query: 1477 SHLNSFIDENPSGLPIGEALDRIHGSVALETLRQQQARFQQWSEHHAFLSQGSVPYPHHH 1536
HLN +P L L QQ +R S A L P P
Sbjct: 849 PHLNQHAVVSPPALH--------------NALPQQPSR---PSNRAAALP----PKPARP 887
Query: 1537 HPHLQHLPQPPLGLHQPPVRADWKLTSSAEDEVETTYSRFQDLIRELSHRDQSETRELAE 1596
L Q PL L QPP+ ++ E+ + Q Q ++L +
Sbjct: 888 PAVSPALTQTPL-LPQPPMAQPPQVLLEDEEPPAPPLTSMQ---------MQLYLQQLQK 937
Query: 1597 MPPPQSRLLQYRQVQSRSPPAVPSPPSSTDHSSHFSNFNDNSRDIEVASNPAFPQRLPPQ 1656
+ PP + LL +VQS+ PP +P PP H S + P PQ PP
Sbjct: 938 VQPP-TPLLPSVKVQSQPPPPLPPPP----HPSVQQQLQ------QQPPPPPPPQPQPPP 986
Query: 1657 IFNSPFSLPSEHLAPPPLKYLAPDGAWTFANLQQNHLMGPGFPYGLPPLPHRPP-QNP-- 1713
+H PP +L P T H+ P P G P PH PP Q P
Sbjct: 987 --------QQQHQPPPRPVHLQPMQFST-------HIQQPPPPQGQQP-PHPPPGQQPPP 1030
Query: 1714 -----FVQIQNHQHAIGQEPFHPLSSRTVSSSSLPSLEEYEPRGPGRPLYQRRISSSSVQ 1768
Q+ H H+ P S+ + + P + + L + +VQ
Sbjct: 1031 PQPAKPQQVIQHHHSPRHHKSDPYSTGHLREAPSPLMIHSPQMSQFQSLTHQSPPQQNVQ 1090
Query: 1769 PCSEE-----VSTPQDSLAQCKELQDHSNQSSFNFSSPESWVNTTSSTPYQNIPCNGSSR 1823
P +E V PQ L KE + HS SP P + R
Sbjct: 1091 PKKQELRAASVVQPQ-PLVVVKEEKIHSPIIRSEPFSPSLRPEPPKHPESIKAPVHLPQR 1149
Query: 1824 TAQPRELIAPPKTVKPPEDQLKSENLEVSSSFNYSVLQHLGQFPPLMP--NKQIAESANS 1881
+ P ++PPE PP P +KQ E
Sbjct: 1150 PEMKPVDVGRP-VIRPPEQNAP---------------------PPGAPDKDKQKQEPKTP 1187
Query: 1882 SSPQSSAGGKPAMSYASALRAPPKPRPPPEQAKKSSDPLSLFQ 1924
+P+ K S+AS ++ P P AK SSD F+
Sbjct: 1188 VAPKKDLKIKNMGSWASLVQ--KHPTTPSSTAKSSSDSFEQFR 1228
Score = 44.7 bits (104), Expect = 0.001
Identities = 104/493 (21%), Positives = 156/493 (31%), Gaps = 133/493 (26%)
Query: 1262 GQPQNQHQEKDQHEQNRNGKSDTNNSGPEINKIRTPEKKPTEPKQVDLESNPQNRSPESR 1321
G+ Q +H H+Q + + P P++ P P + P P S
Sbjct: 732 GREQKKHHHH-HHQQMQQAPAPVPQQPPP-----PPQQPPPPPPPQQQQQPPPPPPPPSM 785
Query: 1322 PSVVYPSTKFPRKDNLNPRHINLPLPAPHAQYAIPNRHFHPL----------------PQ 1365
P P+ K + P I +P Q +P F P+ P
Sbjct: 786 PQQAAPAMK-----SSPPPFIATQVPVLEPQ--LPGSVFDPIGHFTQPILHLPQPELPPH 838
Query: 1366 LPRPP-------------FPIPQQHTLLNQQQNN-------LPEQPNQIPPQPNQVVQQQ 1405
LP+PP P H L QQ + LP +P + PP + + Q
Sbjct: 839 LPQPPEHSTPPHLNQHAVVSPPALHNALPQQPSRPSNRAAALPPKPAR-PPAVSPALTQT 897
Query: 1406 SQLNQQPQQPPPQL--------SPAYQAGPNNAFFNSAVAHRPQSPPAEAVIPEQQPPPM 1457
L Q P PPQ+ +P + + +P +P +V + QPPP
Sbjct: 898 PLLPQPPMAQPPQVLLEDEEPPAPPLTSMQMQLYLQQLQKVQPPTPLLPSVKVQSQPPPP 957
Query: 1458 L-------------QEGHSPLRAIAQPGP------------ILPSHLNSFIDENPSGLPI 1492
L Q+ P QP P + P ++ I + P P
Sbjct: 958 LPPPPHPSVQQQLQQQPPPPPPPQPQPPPQQQHQPPPRPVHLQPMQFSTHIQQPPP--PQ 1015
Query: 1493 GEALDRIHGSVALETLRQQQARFQQWSEHHAFLSQGSVPYPHHHHP------HLQHLPQP 1546
G+ H + Q A+ QQ +HH P HH HL+ P
Sbjct: 1016 GQ--QPPHPPPGQQPPPPQPAKPQQVIQHH--------HSPRHHKSDPYSTGHLREAPS- 1064
Query: 1547 PLGLHQPPVRADWKLTSSAEDEVETTYSRFQDLIRELSHRDQSETRELAEMPPPQSRLLQ 1606
PL +H P + LT + + + E R + + P +++
Sbjct: 1065 PLMIHSPQMSQFQSLTHQSPPQQNV-------------QPKKQELRAASVVQPQPLVVVK 1111
Query: 1607 YRQVQS---RSPPAVPS-PPSSTDHSSHFSNFNDNSRDIEVASNPAFPQR--LPPQIFNS 1660
++ S RS P PS P H + + PQR + P
Sbjct: 1112 EEKIHSPIIRSEPFSPSLRPEPPKHPE------------SIKAPVHLPQRPEMKPVDVGR 1159
Query: 1661 PFSLPSEHLAPPP 1673
P P E APPP
Sbjct: 1160 PVIRPPEQNAPPP 1172
Score = 39.3 bits (90), Expect = 0.038
Identities = 49/186 (26%), Positives = 67/186 (36%), Gaps = 33/186 (17%)
Query: 1145 GIVQPNPSVLIGNPIRAYTPPPPLGPHPNLGKSPSPVQRIDPHTGTSILYVPAVYGGNVV 1204
G +P S + N +A TPP P PN P PVQ PH ++ P + V
Sbjct: 187 GTAKPGVST-VPNTTQASTPPQTQTPQPN----PPPVQAT-PHPFPAV--TPDLIVQTPV 238
Query: 1205 MSVPLPVPWTGYQGRFAVDPRIITHQAAMAYNMNLLQTHGRGSPIPYGLGHHPPVTIGQP 1264
M+V P P Q V P Q +P P + HPP+ P
Sbjct: 239 MTVVPPQP---LQTPPPVPP----------------QPQPPPAPAPQPVQSHPPIIAATP 279
Query: 1265 QNQHQEKDQHEQNRNGKSDTNNSGPEINKIRTPEKKPTEPKQVDLESNPQNRSPESRPSV 1324
Q +K K+DT + I+ I P P EPK L ++ P P
Sbjct: 280 QPVKTKKGVKR-----KADT-TTPTTIDPIHEPPSLPPEPKTTKLGQRRESSRPVKPPKK 333
Query: 1325 VYPSTK 1330
P ++
Sbjct: 334 DVPDSQ 339
Score = 37.0 bits (84), Expect = 0.19
Identities = 77/337 (22%), Positives = 119/337 (35%), Gaps = 45/337 (13%)
Query: 1123 QQQSPPKGKSLHHTQNDHFQNDGIVQPNPSVLIGNPIRAYTPPPPLGPHPNLGKSPSPVQ 1182
+ + PP + Q VQP P+ L+ + PPPPL P P+ PS Q
Sbjct: 914 EDEEPPAPPLTSMQMQLYLQQLQKVQP-PTPLLPSVKVQSQPPPPLPPPPH----PSVQQ 968
Query: 1183 RIDPHTGTSILYVPAVYGGNVVMSVPLPVPWTGYQGRFAVDPRIITHQAAMAYNMNLLQ- 1241
++ P P P Q + PR + H M ++ ++ Q
Sbjct: 969 QLQQQPPPP----------------PPPQPQPPPQQQHQPPPRPV-HLQPMQFSTHIQQP 1011
Query: 1242 --THGRGSPIPYGLGHHPPVTIGQPQNQHQEKDQHEQNRNGKSDTNNSG-----PEINKI 1294
G+ P P G PP QP Q H R+ KSD ++G P I
Sbjct: 1012 PPPQGQQPPHP-PPGQQPPPP--QPAKPQQVIQHHHSPRHHKSDPYSTGHLREAPSPLMI 1068
Query: 1295 RTPEKKPTE--PKQVDLESNPQNRSPESR-PSVVYPSTKFPRKDNLNPRHINLPLPAPHA 1351
+P+ + Q + N Q + E R SVV P K+ I P +
Sbjct: 1069 HSPQMSQFQSLTHQSPPQQNVQPKKQELRAASVVQPQPLVVVKEEKIHSPIIRSEPFSPS 1128
Query: 1352 QYAIPNRHFHPLPQLPRPPFPIPQQHTLLNQQQNNLPEQPNQIPPQPNQVVQQQSQLNQQ 1411
P +H P+ + P +PQ+ + +P PP+ N ++Q
Sbjct: 1129 LRPEPPKH----PESIKAPVHLPQRPEMKPVDVG----RPVIRPPEQNAPPPGAPDKDKQ 1180
Query: 1412 PQQPPPQLSPAYQAG-PNNAFFNSAVAHRPQSPPAEA 1447
Q+P ++P N + S V P +P + A
Sbjct: 1181 KQEPKTPVAPKKDLKIKNMGSWASLVQKHPTTPSSTA 1217
Score = 35.8 bits (81), Expect = 0.42
Identities = 32/161 (19%), Positives = 61/161 (37%), Gaps = 13/161 (8%)
Query: 1280 GKSDTNNSGPEINKIRTPEKKPTEPKQVDLESNPQ--NRSPESRPSVVYPS-TKFPRKDN 1336
G+ +T + P ++ + + T P+ + NP +P P+V + P
Sbjct: 182 GRKETGTAKPGVSTVPNTTQASTPPQTQTPQPNPPPVQATPHPFPAVTPDLIVQTPVMTV 241
Query: 1337 LNPRHINLPLPAPHAQYAIPNRHFHPL----PQLPRPPFPIPQQHTLLNQQQNNLP---- 1388
+ P+ + P P P P P+ P + P P+ + + + P
Sbjct: 242 VPPQPLQTPPPVPPQPQPPPAPAPQPVQSHPPIIAATPQPVKTKKGVKRKADTTTPTTID 301
Query: 1389 --EQPNQIPPQPNQVVQQQSQLNQQPQQPPPQLSPAYQAGP 1427
+P +PP+P Q + + +P +PP + P Q P
Sbjct: 302 PIHEPPSLPPEPKTTKLGQRRESSRPVKPPKKDVPDSQQHP 342
>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 [Homo
sapiens]
Length = 2231
Score = 63.9 bits (154), Expect = 1e-09
Identities = 132/599 (22%), Positives = 198/599 (33%), Gaps = 99/599 (16%)
Query: 1347 PAPHAQYAIPNRHFHPLPQLPRPPFPIPQQHTLLNQQQNNLPEQPNQIPPQPNQV-VQQQ 1405
P P Y P +P+ R P + P+Q Q+PPQ Q V
Sbjct: 486 PYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQ---------YPQQ--QMPPQYGQQGVSGY 534
Query: 1406 SQLNQQP---QQP-PPQLSPAYQAGPNNAFFNSAVAHRPQSPPAEAVIPEQQPPPML--Q 1459
Q QQP QQP PP L P Q P+ S ++PQ ++ + PP+ +
Sbjct: 535 CQQGQQPYYSQQPQPPHLPPQAQYLPSQ----SQQRYQPQQDMSQEGYGTRSQPPLAPGK 590
Query: 1460 EGHSPLRAIAQPGPILPSHLNSFIDENPSGLPIGEALDRIHGSVALETLRQQQARFQQWS 1519
H L I Q P L+ ID+ P+G TL + S
Sbjct: 591 PNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEA--------------TLSSAVSASGSTS 636
Query: 1520 EHHAFLSQGSVPYPHHHHPHLQHLPQPPLGLHQPPVRADWKLTSSAEDEVETTYSRFQDL 1579
+ P+ H PHL +P P PV + S + +
Sbjct: 637 SQGDQSNPAQSPFSPHASPHLSSIPGGP---SPSPVGSPVGSNQSRSGPISPASIPGSQM 693
Query: 1580 IREL--SHRDQSETRELAEMPPPQSR-----------LLQYRQVQSRSPPAVPSPPSSTD 1626
+ S + S L++ P PQ R + QY Q+ P P P
Sbjct: 694 PPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQT-GPSMSPHPSPGGQ 752
Query: 1627 HSSHFSNFNDNSRDIEVASNPAFPQRLPPQIFNSPFSLPSEHLAPPPLKYLAPDGAWTFA 1686
+ S+F ++ S+ + ++ +S P + P Y P +
Sbjct: 753 MHAGISSFQQSN------SSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGIS 806
Query: 1687 NLQQNHLMGPGFPYGLPPLPHRPPQNPFVQIQNHQHAIGQEPFHPLSSRTVSSSSLPSLE 1746
Q H GP P G PL P +QN PF S SS S +
Sbjct: 807 ANNQMHGQGPSQPCGAVPLGRMPSAG----MQN-------RPFPGNMSSMTPSSPGMSQQ 855
Query: 1747 EYEPRGPGRPLYQRRISSSSVQPCSEEVSTPQDSLAQCKELQDHSNQSSFNFSSPESWVN 1806
GP P R+ ++ ++ Q S Q SF + +
Sbjct: 856 GGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQ------------SRQGSFPGMNQSGLM- 902
Query: 1807 TTSSTPYQNIPCNGSSRTAQPRELIAPPKTVKPPEDQLKSENLEVSSSFNYSVLQHLGQF 1866
SS+PY P N SS + APP ++ P + SS+ + + +
Sbjct: 903 -ASSSPYSQ-PMNNSSSLMNTQ---APPYSMAPA--------MVNSSAASVGLADMMSPG 949
Query: 1867 PPLMPNKQIAESANSSSPQSSAGGKPAMSYASALRAPPKP--RPPPEQAKKSSDPLSLF 1923
+P A+ +PQ + K + S + + PP P P P SS +S F
Sbjct: 950 ESKLPLPLKADGKEEGTPQPESKSKDSYS-SQGISQPPTPGNLPVPSPMSPSSASISSF 1007
Score = 34.3 bits (77), Expect = 1.2
Identities = 62/284 (21%), Positives = 101/284 (35%), Gaps = 57/284 (20%)
Query: 1241 QTHGRGSPI---PYGLGHHPPVTIGQPQNQHQEKDQHEQNRNGKSDTNNSGPEINKIRTP 1297
Q G+G P PYG GH P + QP + +H G + G N +
Sbjct: 1327 QYPGQGPPSGQPPYG-GHQPGLYPQQPNYK-----RHMDGMYGPPAKRHEGDMYNMQYSS 1380
Query: 1298 EKKPTEPKQVDLESNPQNRSPESRPSVVYPSTKFP-----RKDNLNPRHINLPLPAPHAQ 1352
+++ + S P R + + Y + + + P+ + PL + ++
Sbjct: 1381 QQQEMYNQYGGSYSGPDRRPIQGQYPYPYSRERMQGPGQIQTHGIPPQMMGGPLQSSSSE 1440
Query: 1353 YAIPN----RHFHPLP----QLPRPPFPIPQQHTLLNQQQNNLPEQP-NQIPPQPNQVVQ 1403
N R+ P P Q P P P + +P+Q N P+ V Q
Sbjct: 1441 GPQQNMWAARNDMPYPYQNRQGPGGPTQAPPYPGMNRTDDMMVPDQRINHESQWPSHVSQ 1500
Query: 1404 QQ----SQLNQQPQQPPPQLSPAYQA----------GPNNAFFNSAVAHR---------- 1439
+Q S + QP PPQ P+YQ P+ A F ++ +R
Sbjct: 1501 RQPYMSSSASMQPITRPPQ--PSYQTPPSLPNHISRAPSPASFQRSLENRMSPSKSPFLP 1558
Query: 1440 --------PQSPPAEAVIPEQQPPPMLQEGHSPLRAIAQPGPIL 1475
P P ++ P QPPP+ +E P ++ P+L
Sbjct: 1559 SMKMQKVMPTVPTSQVTGPPPQPPPIRREITFPPGSVEASQPVL 1602
>gi|237757326 synaptojanin 1 isoform d [Homo sapiens]
Length = 1526
Score = 63.5 bits (153), Expect = 2e-09
Identities = 97/440 (22%), Positives = 152/440 (34%), Gaps = 60/440 (13%)
Query: 1375 QQHTLLNQQQNNLPEQPNQIPPQ-PNQVVQQQSQLNQQPQQPPPQLSPAYQAGPNNAFFN 1433
Q T+ +LP +P++ P + P Q S ++ QP P PQ PA P
Sbjct: 1047 QSPTISEGPVPSLPIRPSRAPSRTPGPPSAQSSPIDAQPATPLPQKDPAQPLEPKRP--- 1103
Query: 1434 SAVAHRPQSPPAEAVIPEQQPPPMLQEGHSPLRAIAQPGPILPSHLNSFIDENPSGLPIG 1493
RP +PP P++ PPP + SP +A PGP S I +
Sbjct: 1104 --PPPRPVAPPTRPAPPQRPPPPSGRSQPSPQAGLAGPGPAGYSTARPTIPPRAGVISAP 1161
Query: 1494 EALDRIHGSVALETLRQQQARFQQWSEHHAFLSQGSVPYPHHHHPHLQHLPQPPLGLHQP 1553
++ R + A + Q++ + S+ FL + P P LP P L +P
Sbjct: 1162 QSHAR---ASAGRLTPESQSKTSETSKGSTFLPEPL--KPQAAFPPQSSLPPPAQRLQEP 1216
Query: 1554 --PVRADWKLTSSAEDEVETTYSRFQDLIRELSHRDQSETRELAEMPPPQSRLLQYRQVQ 1611
PV A S + +ET PPP+SR +
Sbjct: 1217 LVPVAAPMP-QSGPQPNLET-----------------------PPQPPPRSRSSHSLPSE 1252
Query: 1612 SRSPPAVPS---PPSSTDHSSHFSNFNDNSRDIEVASNPAFPQRLPPQIFNSPFSLPSEH 1668
+ S P V + + F D S ++ S + P +P+
Sbjct: 1253 ASSQPQVKTNGISDGKRESPLKIDPFEDLSFNLLAVSKAQLSVQTSP--------VPT-- 1302
Query: 1669 LAPPPLKYLAPDGAWTFANLQQNHLMGPGFPYGLPPLPHRPPQNPFVQIQNHQHAIGQEP 1728
P P + + A Q N L +PP+P R ++ + G
Sbjct: 1303 --PDPKRLIQLPSA-----TQSNVLSSVSCMPTMPPIPARSQSQENMRSSPNPFITGLTR 1355
Query: 1729 FHPLSSRTVSSSSLPSLEEYEPRGPGRPLYQRRISSS---SVQPCSEEVSTPQDSLAQCK 1785
+P S RT + + + E + ++ S S+QP S SL K
Sbjct: 1356 TNPFSDRTAAPGNPFRAKSEESEATSWFSKEEPVTISPFPSLQPLGHNKSRASSSLDGFK 1415
Query: 1786 ELQDHSNQSSFNFSSPESWV 1805
+ D QS+ S+P+ WV
Sbjct: 1416 DSFDLQGQSTLKISNPKGWV 1435
Score = 42.0 bits (97), Expect = 0.006
Identities = 54/201 (26%), Positives = 71/201 (35%), Gaps = 30/201 (14%)
Query: 1281 KSDTNNSGP----EINKIRTPEKKPTEPKQVDLESNPQNRSPESRPSVVYPSTKFPRKDN 1336
+S T + GP I R P + P P S +S P P+T P+KD
Sbjct: 1047 QSPTISEGPVPSLPIRPSRAPSRTPGPP------------SAQSSPIDAQPATPLPQKDP 1094
Query: 1337 LNPRHINLPLPAPHAQYAIPNRHFHPLPQLPRPPF----PIPQQHTLLNQQQNNLPEQPN 1392
P + P P A P R PQ P PP P PQ +P
Sbjct: 1095 AQP--LEPKRPPPPRPVAPPTR--PAPPQRPPPPSGRSQPSPQAGLAGPGPAGYSTARPT 1150
Query: 1393 QIPPQPNQVVQQQSQLNQQPQQPPPQLSPAYQAGPNNAFFNSAVAHRPQSPPAEAVIPEQ 1452
IPP+ + QS + +L+P Q+ + S P P A A P+
Sbjct: 1151 -IPPRAGVISAPQS----HARASAGRLTPESQSKTSETSKGSTFLPEPLKPQA-AFPPQS 1204
Query: 1453 QPPPMLQEGHSPLRAIAQPGP 1473
PP Q PL +A P P
Sbjct: 1205 SLPPPAQRLQEPLVPVAAPMP 1225
Score = 31.6 bits (70), Expect = 7.9
Identities = 76/372 (20%), Positives = 127/372 (34%), Gaps = 57/372 (15%)
Query: 1566 EDEVETTYSRFQDLIRELSHRDQ---SETRELAEMPPPQSRLLQYRQVQSRSPPAVPSPP 1622
ED++ T+ + LS + + T +A P + L+ + A+PS
Sbjct: 930 EDKMWVTFLEGSSALNVLSLNGKELLNRTITIALKSPDWIKNLEEEMSLEKISIALPSST 989
Query: 1623 SST------DHSSHFS---NFNDNSRDIEVASNPAFPQRLPPQIFN------------SP 1661
SST + ++ F + +D S ++E PQ L P + SP
Sbjct: 990 SSTLLGEDAEVAADFDMEGDVDDYSAEVE----ELLPQHLQPSSSSGLGTSPSSSPRTSP 1045
Query: 1662 FSLPSEHLAPPPLKYLAPDGAWTFANLQQNHLMGPGFPYGLPPLPHRPPQNPFVQIQNHQ 1721
P+ P P + P A + + P PLP + P P
Sbjct: 1046 CQSPTISEGPVPSLPIRPSRAPSRTPGPPSAQSSPIDAQPATPLPQKDPAQPL------- 1098
Query: 1722 HAIGQEPFHPLSSRTVSSSSLPSLEEYEPRGPGRPLYQRRISSSSVQPCSEEVSTPQ--D 1779
EP P R V+ + P+ + P GR + + P + P
Sbjct: 1099 -----EPKRPPPPRPVAPPTRPAPPQRPPPPSGRSQPSPQAGLAGPGPAGYSTARPTIPP 1153
Query: 1780 SLAQCKELQDHSNQSSFNFSSPESWVNTTSSTPYQNIPCNGSS---RTAQPRELIAPPKT 1836
Q H+ S+ + PES T+ ++ GS+ +P+ P +
Sbjct: 1154 RAGVISAPQSHARASAGRLT-PESQSKTSETS-------KGSTFLPEPLKPQAAFPPQSS 1205
Query: 1837 VKPPEDQLKSENLEVSSSFNYSVLQHLGQFPPLMPNKQIAE----SANSSSPQSSAGGKP 1892
+ PP +L+ + V++ S Q + PP P + + S SS PQ G
Sbjct: 1206 LPPPAQRLQEPLVPVAAPMPQSGPQPNLETPPQPPPRSRSSHSLPSEASSQPQVKTNGIS 1265
Query: 1893 AMSYASALRAPP 1904
S L+ P
Sbjct: 1266 DGKRESPLKIDP 1277
>gi|28626521 zinc finger, NFX1-type containing 1 [Homo sapiens]
Length = 1918
Score = 61.2 bits (147), Expect = 9e-09
Identities = 90/348 (25%), Positives = 145/348 (41%), Gaps = 67/348 (19%)
Query: 748 SSAHSTFQMPQKED--ILKHRVVV--VTLNTSQYLCQLD-LEPGFFTHILLDEAAQAMEC 802
+SA ++ +ED ILK VV T ++Y L +EP ++++EAA+ +E
Sbjct: 958 TSAERMAELRLQEDLHILKDAQVVGMTTTGAAKYRQILQKVEPRI---VIVEEAAEVLEA 1014
Query: 803 ETIMPLALATQNTRIVLAGDHMQLSPF--VYSEFARERNLHVSLLDRL-----------Y 849
TI L+ A Q+ ++L GDH QL P VY + A+ NL VSL +RL Y
Sbjct: 1015 HTIATLSKACQH--LILIGDHQQLRPSANVY-DLAKNFNLEVSLFERLVKVNIPFVRLNY 1071
Query: 850 EHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPAHKDFYPLTFFTARGED 909
+H R+L Y+ E N+ S L YE S + +P ++
Sbjct: 1072 QHRMCPEIARLLTPHIYQDLE---NHPSVLKYEKIKGVSSNLFFVEHNFP-------EQE 1121
Query: 910 VQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQVFRIRAELRK 969
+QE S N E VVE + + + I ++T Y Q+F +R +
Sbjct: 1122 IQEGKS--HQNQHEAHFVVELCKYFLCQ------EYLPSQITILTTYTGQLFCLRKLMPA 1173
Query: 970 KRLSDVNVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKKKEQLLEDSTEDLDYGFLS 1029
K + V V V QG++ ++ LS VR S ++ GFL
Sbjct: 1174 KTFAGVRVHVVDKYQGEENDIILLSLVR---------------------SNQEGKVGFLQ 1212
Query: 1030 NYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFIALCHENSSL 1077
+ A++RA+ + +G+ L + W + I EN+ +
Sbjct: 1213 ISNRICVALSRAKKGMYCIGNMQMLAKV----PLWSKIIHTLRENNQI 1256
Score = 33.9 bits (76), Expect = 1.6
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 15/85 (17%)
Query: 633 QWDEQLDPRLNAKQKEAV-LAITTPLAIQLPPVLIIGPYGTGKTFTLAQAVKHILQQ--- 688
QW + +L+ Q EA+ A+T LAI I GP GTGKT+ + V+ +L
Sbjct: 589 QWPSKEALKLDDSQMEALQFALTRELAI------IQGPPGTGKTYVGLKIVQALLTNESV 642
Query: 689 -----QETRILICTHSNSAADLYIK 708
Q+ IL+ ++N A D +++
Sbjct: 643 WQISLQKFPILVVCYTNHALDQFLE 667
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 60.8 bits (146), Expect = 1e-08
Identities = 150/659 (22%), Positives = 212/659 (32%), Gaps = 151/659 (22%)
Query: 1244 GRGSPIPYGL---GHHPPVTIGQPQNQHQEKDQHEQNRNGKSDTNNSGPEINKIRTPEKK 1300
GR SPI + G + P N + + + + K + S P + R EK
Sbjct: 43 GRTSPINEDIRSSGRNSPSAASTSSNDSKAETVKKSAKKVKEEA--SSPLKSNKRQREKV 100
Query: 1301 PTEPKQVDLESNPQNRSPE-SRPSVVYPSTKFPRKDNLNPRHINLPLPAPHAQYAIPNRH 1359
++ ++ D S+ + ++ E SRP+ S ++ + R +N + NR
Sbjct: 101 ASDTEEADRTSSKKTKTQEISRPN----SPSEGEGESSDSRSVNDEGSSDPKDIDQDNRS 156
Query: 1360 FHPL---PQLPRPPFPIPQQHTLLNQQQNNLPEQPNQIPPQPNQVVQQQSQLNQQPQQP- 1415
P PQ Q +L Q L + P + P P+ QL P
Sbjct: 157 TSPSIPSPQDNESDSDSSAQQQMLQAQPPAL-QAPTGVTPAPSSAPPGTPQLPTPGPTPS 215
Query: 1416 ----PPQLSPAYQAGPN----------NAFFNSAVAHRPQSPPAEAVIPEQQPPPMLQEG 1461
PPQ SP PN + A A PQ PP+ P P P LQ
Sbjct: 216 ATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQ-- 273
Query: 1462 HSPLRAIAQPGPILPSHLNSFIDENPSGLPIGEALDRIHGSVALETLRQQQARFQQWSEH 1521
PL A P PSH A +HG
Sbjct: 274 --PLTGSAGQ-PSAPSH----------------AQPPLHG-------------------- 294
Query: 1522 HAFLSQGSVPYPH--HHHPHLQHLPQPPLGLHQPPVRADWKLTSSAEDEVETTYSRFQDL 1579
QG P PH P LQH P PP PP + + ++ Q
Sbjct: 295 -----QGP-PGPHSLQAGPLLQH-PGPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLP 347
Query: 1580 IRELSHRDQSETRELAEMPPPQSRLLQYRQVQSRSPPAVPSP----PSSTDHSSHFSNFN 1635
+ + + Q RE P P + + PP P P P + H H S +
Sbjct: 348 ASQSALQSQQPPREQPLPPAPLA------MPHIKPPPTTPIPQLPAPQAHKHPPHLSGPS 401
Query: 1636 DNSRDIEVASNPAFPQRLPPQIFNSPFSLPSEHLAPPPLKYL-----APDGAWTFANLQQ 1690
S + + PA L P S PS H PPPL+ + P L Q
Sbjct: 402 PFSMNANLPPPPA----LKPLSSLSTHHPPSAH--PPPLQLMPQSQPLPSSPAQPPGLTQ 455
Query: 1691 NHLMGPGFPYGLPPLPHRP-------PQNPFVQIQNHQHAIGQEPFHPLSSRTVSSSSLP 1743
+ + P PP H P PQ PF Q H G P P++ T S+S P
Sbjct: 456 SQNLPP------PPASHPPTGLHQVAPQPPFAQ---HPFVPGGPP--PITPPTCPSTSTP 504
Query: 1744 SLEEYEPRGPGR----------------------PLYQRRISSSSVQPCSEEVSTPQDSL 1781
P GPG PL +I ++ E S P
Sbjct: 505 ------PAGPGTSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEEALDDAEEPESPPPPPR 558
Query: 1782 AQCKE-----LQDHSNQSSFNFSSPESWVNTTSSTPYQNIPCNGSSRTAQPRELIAPPK 1835
+ E H++QS+ + + N+ + T +P GS + E I K
Sbjct: 559 SPSPEPTVVDTPSHASQSARFYKHLDRGYNSCARTDLYFMPLAGSKLAKKREEAIEKAK 617
Score = 48.9 bits (115), Expect = 5e-05
Identities = 67/261 (25%), Positives = 91/261 (34%), Gaps = 39/261 (14%)
Query: 1243 HGRGSPIPYGLGH---HPPV-----TIGQPQN-QHQEKDQHEQNRNGKSDTNNSGPEINK 1293
H + P P+ H HPP+ + GQP H + H Q G +GP +
Sbjct: 253 HPQRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQ-AGPLLQH 311
Query: 1294 IRTPEKKPTEPK----QVDLESNPQNRSPESRPSVVYPSTKFPRKDNLNPRHINLPLPAP 1349
P+ P+ Q L ++P P + S+ P+++ + PR LP PAP
Sbjct: 312 PGPPQPFGLPPQASQGQAPLGTSPAAAYPHT--SLQLPASQSALQSQQPPREQPLP-PAP 368
Query: 1350 HAQYAIPNRHFHPLPQLPRPPFPIPQQHTLLNQQQNNLPEQPNQIPPQPNQVVQQQSQLN 1409
A+P H P P P P P PQ H P N P P + S
Sbjct: 369 ---LAMP--HIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLST 423
Query: 1410 QQP---QQPPPQLSPAYQAGPNNAFFNSAVAHRPQSPPAEAVIPEQQPPPMLQEGHSPLR 1466
P PP QL P Q P++ P PP PPP P
Sbjct: 424 HHPPSAHPPPLQLMPQSQPLPSS----------PAQPPGLTQSQNLPPPP----ASHPPT 469
Query: 1467 AIAQPGPILPSHLNSFIDENP 1487
+ Q P P + F+ P
Sbjct: 470 GLHQVAPQPPFAQHPFVPGGP 490
Score = 33.5 bits (75), Expect = 2.1
Identities = 75/331 (22%), Positives = 102/331 (30%), Gaps = 72/331 (21%)
Query: 1616 PAVPSPPSSTDHSSHFSNFNDNSRDIEVASNPAFPQRLPPQIFNSPFSLPSEHLAPPPLK 1675
P++PSP DN D + ++ Q PP + P+ APP
Sbjct: 159 PSIPSP-------------QDNESDSDSSAQQQMLQAQPPALQAPTGVTPAPSSAPPGTP 205
Query: 1676 YLAPDGAWTFANLQQNHLMGPGFPYGLPPLPHRP--PQNPFVQIQNHQHAIGQEPFHPLS 1733
L G A P G P P PQ P + H H HP
Sbjct: 206 QLPTPGPTPSATAVP--------PQGSPTASQAPNQPQAPTAPVP-HTHIQQAPALHP-- 254
Query: 1734 SRTVSSSSLPSLEEYEPRGPGRPLYQRRISSSSVQPCSEEVSTPQDSLAQCKELQDHSNQ 1793
R S P + P P + + S QP P Q L H
Sbjct: 255 QRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGP 314
Query: 1794 SS-FNF----SSPESWVNTTSSTPYQN----IPCNGSSRTAQ--PRELIAPPKTVKPPED 1842
F S ++ + T+ + Y + +P + S+ +Q PRE PP + P
Sbjct: 315 PQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMP-- 372
Query: 1843 QLKSENLEVSSSFNYSVLQHLGQFPPLMPNKQI-AESANSSSPQSSAGGK---------- 1891
H+ PP P Q+ A A+ P S
Sbjct: 373 -------------------HIKP-PPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPP 412
Query: 1892 PAMSYASALRA--PPKPRPPPEQAKKSSDPL 1920
PA+ S+L PP PPP Q S PL
Sbjct: 413 PALKPLSSLSTHHPPSAHPPPLQLMPQSQPL 443
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 60.8 bits (146), Expect = 1e-08
Identities = 150/659 (22%), Positives = 212/659 (32%), Gaps = 151/659 (22%)
Query: 1244 GRGSPIPYGL---GHHPPVTIGQPQNQHQEKDQHEQNRNGKSDTNNSGPEINKIRTPEKK 1300
GR SPI + G + P N + + + + K + S P + R EK
Sbjct: 597 GRTSPINEDIRSSGRNSPSAASTSSNDSKAETVKKSAKKVKEEA--SSPLKSNKRQREKV 654
Query: 1301 PTEPKQVDLESNPQNRSPE-SRPSVVYPSTKFPRKDNLNPRHINLPLPAPHAQYAIPNRH 1359
++ ++ D S+ + ++ E SRP+ S ++ + R +N + NR
Sbjct: 655 ASDTEEADRTSSKKTKTQEISRPN----SPSEGEGESSDSRSVNDEGSSDPKDIDQDNRS 710
Query: 1360 FHPL---PQLPRPPFPIPQQHTLLNQQQNNLPEQPNQIPPQPNQVVQQQSQLNQQPQQP- 1415
P PQ Q +L Q L + P + P P+ QL P
Sbjct: 711 TSPSIPSPQDNESDSDSSAQQQMLQAQPPAL-QAPTGVTPAPSSAPPGTPQLPTPGPTPS 769
Query: 1416 ----PPQLSPAYQAGPN----------NAFFNSAVAHRPQSPPAEAVIPEQQPPPMLQEG 1461
PPQ SP PN + A A PQ PP+ P P P LQ
Sbjct: 770 ATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQ-- 827
Query: 1462 HSPLRAIAQPGPILPSHLNSFIDENPSGLPIGEALDRIHGSVALETLRQQQARFQQWSEH 1521
PL A P PSH A +HG
Sbjct: 828 --PLTGSAGQ-PSAPSH----------------AQPPLHG-------------------- 848
Query: 1522 HAFLSQGSVPYPH--HHHPHLQHLPQPPLGLHQPPVRADWKLTSSAEDEVETTYSRFQDL 1579
QG P PH P LQH P PP PP + + ++ Q
Sbjct: 849 -----QGP-PGPHSLQAGPLLQH-PGPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLP 901
Query: 1580 IRELSHRDQSETRELAEMPPPQSRLLQYRQVQSRSPPAVPSP----PSSTDHSSHFSNFN 1635
+ + + Q RE P P + + PP P P P + H H S +
Sbjct: 902 ASQSALQSQQPPREQPLPPAPLA------MPHIKPPPTTPIPQLPAPQAHKHPPHLSGPS 955
Query: 1636 DNSRDIEVASNPAFPQRLPPQIFNSPFSLPSEHLAPPPLKYL-----APDGAWTFANLQQ 1690
S + + PA L P S PS H PPPL+ + P L Q
Sbjct: 956 PFSMNANLPPPPA----LKPLSSLSTHHPPSAH--PPPLQLMPQSQPLPSSPAQPPGLTQ 1009
Query: 1691 NHLMGPGFPYGLPPLPHRP-------PQNPFVQIQNHQHAIGQEPFHPLSSRTVSSSSLP 1743
+ + P PP H P PQ PF Q H G P P++ T S+S P
Sbjct: 1010 SQNLPP------PPASHPPTGLHQVAPQPPFAQ---HPFVPGGPP--PITPPTCPSTSTP 1058
Query: 1744 SLEEYEPRGPGR----------------------PLYQRRISSSSVQPCSEEVSTPQDSL 1781
P GPG PL +I ++ E S P
Sbjct: 1059 ------PAGPGTSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEEALDDAEEPESPPPPPR 1112
Query: 1782 AQCKE-----LQDHSNQSSFNFSSPESWVNTTSSTPYQNIPCNGSSRTAQPRELIAPPK 1835
+ E H++QS+ + + N+ + T +P GS + E I K
Sbjct: 1113 SPSPEPTVVDTPSHASQSARFYKHLDRGYNSCARTDLYFMPLAGSKLAKKREEAIEKAK 1171
Score = 48.9 bits (115), Expect = 5e-05
Identities = 67/261 (25%), Positives = 91/261 (34%), Gaps = 39/261 (14%)
Query: 1243 HGRGSPIPYGLGH---HPPV-----TIGQPQN-QHQEKDQHEQNRNGKSDTNNSGPEINK 1293
H + P P+ H HPP+ + GQP H + H Q G +GP +
Sbjct: 807 HPQRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQ-AGPLLQH 865
Query: 1294 IRTPEKKPTEPK----QVDLESNPQNRSPESRPSVVYPSTKFPRKDNLNPRHINLPLPAP 1349
P+ P+ Q L ++P P + S+ P+++ + PR LP PAP
Sbjct: 866 PGPPQPFGLPPQASQGQAPLGTSPAAAYPHT--SLQLPASQSALQSQQPPREQPLP-PAP 922
Query: 1350 HAQYAIPNRHFHPLPQLPRPPFPIPQQHTLLNQQQNNLPEQPNQIPPQPNQVVQQQSQLN 1409
A+P H P P P P P PQ H P N P P + S
Sbjct: 923 ---LAMP--HIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLST 977
Query: 1410 QQP---QQPPPQLSPAYQAGPNNAFFNSAVAHRPQSPPAEAVIPEQQPPPMLQEGHSPLR 1466
P PP QL P Q P++ P PP PPP P
Sbjct: 978 HHPPSAHPPPLQLMPQSQPLPSS----------PAQPPGLTQSQNLPPPP----ASHPPT 1023
Query: 1467 AIAQPGPILPSHLNSFIDENP 1487
+ Q P P + F+ P
Sbjct: 1024 GLHQVAPQPPFAQHPFVPGGP 1044
Score = 33.5 bits (75), Expect = 2.1
Identities = 75/331 (22%), Positives = 102/331 (30%), Gaps = 72/331 (21%)
Query: 1616 PAVPSPPSSTDHSSHFSNFNDNSRDIEVASNPAFPQRLPPQIFNSPFSLPSEHLAPPPLK 1675
P++PSP DN D + ++ Q PP + P+ APP
Sbjct: 713 PSIPSP-------------QDNESDSDSSAQQQMLQAQPPALQAPTGVTPAPSSAPPGTP 759
Query: 1676 YLAPDGAWTFANLQQNHLMGPGFPYGLPPLPHRP--PQNPFVQIQNHQHAIGQEPFHPLS 1733
L G A P G P P PQ P + H H HP
Sbjct: 760 QLPTPGPTPSATAVP--------PQGSPTASQAPNQPQAPTAPVP-HTHIQQAPALHP-- 808
Query: 1734 SRTVSSSSLPSLEEYEPRGPGRPLYQRRISSSSVQPCSEEVSTPQDSLAQCKELQDHSNQ 1793
R S P + P P + + S QP P Q L H
Sbjct: 809 QRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGP 868
Query: 1794 SS-FNF----SSPESWVNTTSSTPYQN----IPCNGSSRTAQ--PRELIAPPKTVKPPED 1842
F S ++ + T+ + Y + +P + S+ +Q PRE PP + P
Sbjct: 869 PQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMP-- 926
Query: 1843 QLKSENLEVSSSFNYSVLQHLGQFPPLMPNKQI-AESANSSSPQSSAGGK---------- 1891
H+ PP P Q+ A A+ P S
Sbjct: 927 -------------------HIKP-PPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPP 966
Query: 1892 PAMSYASALRA--PPKPRPPPEQAKKSSDPL 1920
PA+ S+L PP PPP Q S PL
Sbjct: 967 PALKPLSSLSTHHPPSAHPPPLQLMPQSQPL 997
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 60.8 bits (146), Expect = 1e-08
Identities = 150/659 (22%), Positives = 212/659 (32%), Gaps = 151/659 (22%)
Query: 1244 GRGSPIPYGL---GHHPPVTIGQPQNQHQEKDQHEQNRNGKSDTNNSGPEINKIRTPEKK 1300
GR SPI + G + P N + + + + K + S P + R EK
Sbjct: 597 GRTSPINEDIRSSGRNSPSAASTSSNDSKAETVKKSAKKVKEEA--SSPLKSNKRQREKV 654
Query: 1301 PTEPKQVDLESNPQNRSPE-SRPSVVYPSTKFPRKDNLNPRHINLPLPAPHAQYAIPNRH 1359
++ ++ D S+ + ++ E SRP+ S ++ + R +N + NR
Sbjct: 655 ASDTEEADRTSSKKTKTQEISRPN----SPSEGEGESSDSRSVNDEGSSDPKDIDQDNRS 710
Query: 1360 FHPL---PQLPRPPFPIPQQHTLLNQQQNNLPEQPNQIPPQPNQVVQQQSQLNQQPQQP- 1415
P PQ Q +L Q L + P + P P+ QL P
Sbjct: 711 TSPSIPSPQDNESDSDSSAQQQMLQAQPPAL-QAPTGVTPAPSSAPPGTPQLPTPGPTPS 769
Query: 1416 ----PPQLSPAYQAGPN----------NAFFNSAVAHRPQSPPAEAVIPEQQPPPMLQEG 1461
PPQ SP PN + A A PQ PP+ P P P LQ
Sbjct: 770 ATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQ-- 827
Query: 1462 HSPLRAIAQPGPILPSHLNSFIDENPSGLPIGEALDRIHGSVALETLRQQQARFQQWSEH 1521
PL A P PSH A +HG
Sbjct: 828 --PLTGSAGQ-PSAPSH----------------AQPPLHG-------------------- 848
Query: 1522 HAFLSQGSVPYPH--HHHPHLQHLPQPPLGLHQPPVRADWKLTSSAEDEVETTYSRFQDL 1579
QG P PH P LQH P PP PP + + ++ Q
Sbjct: 849 -----QGP-PGPHSLQAGPLLQH-PGPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLP 901
Query: 1580 IRELSHRDQSETRELAEMPPPQSRLLQYRQVQSRSPPAVPSP----PSSTDHSSHFSNFN 1635
+ + + Q RE P P + + PP P P P + H H S +
Sbjct: 902 ASQSALQSQQPPREQPLPPAPLA------MPHIKPPPTTPIPQLPAPQAHKHPPHLSGPS 955
Query: 1636 DNSRDIEVASNPAFPQRLPPQIFNSPFSLPSEHLAPPPLKYL-----APDGAWTFANLQQ 1690
S + + PA L P S PS H PPPL+ + P L Q
Sbjct: 956 PFSMNANLPPPPA----LKPLSSLSTHHPPSAH--PPPLQLMPQSQPLPSSPAQPPGLTQ 1009
Query: 1691 NHLMGPGFPYGLPPLPHRP-------PQNPFVQIQNHQHAIGQEPFHPLSSRTVSSSSLP 1743
+ + P PP H P PQ PF Q H G P P++ T S+S P
Sbjct: 1010 SQNLPP------PPASHPPTGLHQVAPQPPFAQ---HPFVPGGPP--PITPPTCPSTSTP 1058
Query: 1744 SLEEYEPRGPGR----------------------PLYQRRISSSSVQPCSEEVSTPQDSL 1781
P GPG PL +I ++ E S P
Sbjct: 1059 ------PAGPGTSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEEALDDAEEPESPPPPPR 1112
Query: 1782 AQCKE-----LQDHSNQSSFNFSSPESWVNTTSSTPYQNIPCNGSSRTAQPRELIAPPK 1835
+ E H++QS+ + + N+ + T +P GS + E I K
Sbjct: 1113 SPSPEPTVVDTPSHASQSARFYKHLDRGYNSCARTDLYFMPLAGSKLAKKREEAIEKAK 1171
Score = 48.9 bits (115), Expect = 5e-05
Identities = 67/261 (25%), Positives = 91/261 (34%), Gaps = 39/261 (14%)
Query: 1243 HGRGSPIPYGLGH---HPPV-----TIGQPQN-QHQEKDQHEQNRNGKSDTNNSGPEINK 1293
H + P P+ H HPP+ + GQP H + H Q G +GP +
Sbjct: 807 HPQRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQ-AGPLLQH 865
Query: 1294 IRTPEKKPTEPK----QVDLESNPQNRSPESRPSVVYPSTKFPRKDNLNPRHINLPLPAP 1349
P+ P+ Q L ++P P + S+ P+++ + PR LP PAP
Sbjct: 866 PGPPQPFGLPPQASQGQAPLGTSPAAAYPHT--SLQLPASQSALQSQQPPREQPLP-PAP 922
Query: 1350 HAQYAIPNRHFHPLPQLPRPPFPIPQQHTLLNQQQNNLPEQPNQIPPQPNQVVQQQSQLN 1409
A+P H P P P P P PQ H P N P P + S
Sbjct: 923 ---LAMP--HIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLST 977
Query: 1410 QQP---QQPPPQLSPAYQAGPNNAFFNSAVAHRPQSPPAEAVIPEQQPPPMLQEGHSPLR 1466
P PP QL P Q P++ P PP PPP P
Sbjct: 978 HHPPSAHPPPLQLMPQSQPLPSS----------PAQPPGLTQSQNLPPPP----ASHPPT 1023
Query: 1467 AIAQPGPILPSHLNSFIDENP 1487
+ Q P P + F+ P
Sbjct: 1024 GLHQVAPQPPFAQHPFVPGGP 1044
Score = 33.5 bits (75), Expect = 2.1
Identities = 75/331 (22%), Positives = 102/331 (30%), Gaps = 72/331 (21%)
Query: 1616 PAVPSPPSSTDHSSHFSNFNDNSRDIEVASNPAFPQRLPPQIFNSPFSLPSEHLAPPPLK 1675
P++PSP DN D + ++ Q PP + P+ APP
Sbjct: 713 PSIPSP-------------QDNESDSDSSAQQQMLQAQPPALQAPTGVTPAPSSAPPGTP 759
Query: 1676 YLAPDGAWTFANLQQNHLMGPGFPYGLPPLPHRP--PQNPFVQIQNHQHAIGQEPFHPLS 1733
L G A P G P P PQ P + H H HP
Sbjct: 760 QLPTPGPTPSATAVP--------PQGSPTASQAPNQPQAPTAPVP-HTHIQQAPALHP-- 808
Query: 1734 SRTVSSSSLPSLEEYEPRGPGRPLYQRRISSSSVQPCSEEVSTPQDSLAQCKELQDHSNQ 1793
R S P + P P + + S QP P Q L H
Sbjct: 809 QRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGP 868
Query: 1794 SS-FNF----SSPESWVNTTSSTPYQN----IPCNGSSRTAQ--PRELIAPPKTVKPPED 1842
F S ++ + T+ + Y + +P + S+ +Q PRE PP + P
Sbjct: 869 PQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMP-- 926
Query: 1843 QLKSENLEVSSSFNYSVLQHLGQFPPLMPNKQI-AESANSSSPQSSAGGK---------- 1891
H+ PP P Q+ A A+ P S
Sbjct: 927 -------------------HIKP-PPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPP 966
Query: 1892 PAMSYASALRA--PPKPRPPPEQAKKSSDPL 1920
PA+ S+L PP PPP Q S PL
Sbjct: 967 PALKPLSSLSTHHPPSAHPPPLQLMPQSQPL 997
>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 [Homo
sapiens]
Length = 2178
Score = 59.3 bits (142), Expect = 4e-08
Identities = 129/593 (21%), Positives = 197/593 (33%), Gaps = 99/593 (16%)
Query: 1347 PAPHAQYAIPNRHFHPLPQLPRPPFPIPQQHTLLNQQQNNLPEQPNQIPPQPNQV-VQQQ 1405
P P Y P +P+ R P + P+Q Q+PPQ Q V
Sbjct: 486 PYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQ---------YPQQ--QMPPQYGQQGVSGY 534
Query: 1406 SQLNQQP---QQP-PPQLSPAYQAGPNNAFFNSAVAHRPQSPPAEAVIPEQQPPPML--Q 1459
Q QQP QQP PP L P Q P+ S ++PQ ++ + PP+ +
Sbjct: 535 CQQGQQPYYSQQPQPPHLPPQAQYLPSQ----SQQRYQPQQDMSQEGYGTRSQPPLAPGK 590
Query: 1460 EGHSPLRAIAQPGPILPSHLNSFIDENPSGLPIGEALDRIHGSVALETLRQQQARFQQWS 1519
H L I Q P L+ ID+ P+G TL + S
Sbjct: 591 PNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEA--------------TLSSAVSASGSTS 636
Query: 1520 EHHAFLSQGSVPYPHHHHPHLQHLPQPPLGLHQPPVRADWKLTSSAEDEVETTYSRFQDL 1579
+ P+ H PHL +P P PV + S + +
Sbjct: 637 SQGDQSNPAQSPFSPHASPHLSSIPGGP---SPSPVGSPVGSNQSRSGPISPASIPGSQM 693
Query: 1580 IREL--SHRDQSETRELAEMPPPQSR-----------LLQYRQVQSRSPPAVPSPPSSTD 1626
+ S + S L++ P PQ R + QY Q+ P P P
Sbjct: 694 PPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQT-GPSMSPHPSPGGQ 752
Query: 1627 HSSHFSNFNDNSRDIEVASNPAFPQRLPPQIFNSPFSLPSEHLAPPPLKYLAPDGAWTFA 1686
+ S+F ++ S+ + ++ +S P + P Y P +
Sbjct: 753 MHAGISSFQQSN------SSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGIS 806
Query: 1687 NLQQNHLMGPGFPYGLPPLPHRPPQNPFVQIQNHQHAIGQEPFHPLSSRTVSSSSLPSLE 1746
Q H GP P G PL P +QN PF S SS S +
Sbjct: 807 ANNQMHGQGPSQPCGAVPLGRMPSAG----MQN-------RPFPGNMSSMTPSSPGMSQQ 855
Query: 1747 EYEPRGPGRPLYQRRISSSS---VQPCSEEVSTPQDSLAQCKELQDHSNQSSFNFSSP-- 1801
GP P R+ ++ +Q + + Q S Q SS +S P
Sbjct: 856 GGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMN--QSGLMASSSPYSQPMN 913
Query: 1802 -ESWVNTTSSTPYQNIPC--NGSSRTAQPRELIAPPKTVKP--------------PEDQL 1844
S + T + PY P N S+ + ++++P ++ P PE +
Sbjct: 914 NSSSLMNTQAPPYSMAPAMVNSSAASVGLADMMSPGESKLPLPLKADGKEEGTPQPESKS 973
Query: 1845 KSENLEVSSSFNYSVLQHLGQFP--PLMPNKQIAESANSSSPQSS---AGGKP 1892
K + ++ + + LG P L ++ + SP SS G KP
Sbjct: 974 KKSSSSTTTGEKITKVYELGNEPERKLWVDRYLTFMEERGSPVSSLPAVGKKP 1026
Score = 34.3 bits (77), Expect = 1.2
Identities = 62/284 (21%), Positives = 101/284 (35%), Gaps = 57/284 (20%)
Query: 1241 QTHGRGSPI---PYGLGHHPPVTIGQPQNQHQEKDQHEQNRNGKSDTNNSGPEINKIRTP 1297
Q G+G P PYG GH P + QP + +H G + G N +
Sbjct: 1274 QYPGQGPPSGQPPYG-GHQPGLYPQQPNYK-----RHMDGMYGPPAKRHEGDMYNMQYSS 1327
Query: 1298 EKKPTEPKQVDLESNPQNRSPESRPSVVYPSTKFP-----RKDNLNPRHINLPLPAPHAQ 1352
+++ + S P R + + Y + + + P+ + PL + ++
Sbjct: 1328 QQQEMYNQYGGSYSGPDRRPIQGQYPYPYSRERMQGPGQIQTHGIPPQMMGGPLQSSSSE 1387
Query: 1353 YAIPN----RHFHPLP----QLPRPPFPIPQQHTLLNQQQNNLPEQP-NQIPPQPNQVVQ 1403
N R+ P P Q P P P + +P+Q N P+ V Q
Sbjct: 1388 GPQQNMWAARNDMPYPYQNRQGPGGPTQAPPYPGMNRTDDMMVPDQRINHESQWPSHVSQ 1447
Query: 1404 QQ----SQLNQQPQQPPPQLSPAYQA----------GPNNAFFNSAVAHR---------- 1439
+Q S + QP PPQ P+YQ P+ A F ++ +R
Sbjct: 1448 RQPYMSSSASMQPITRPPQ--PSYQTPPSLPNHISRAPSPASFQRSLENRMSPSKSPFLP 1505
Query: 1440 --------PQSPPAEAVIPEQQPPPMLQEGHSPLRAIAQPGPIL 1475
P P ++ P QPPP+ +E P ++ P+L
Sbjct: 1506 SMKMQKVMPTVPTSQVTGPPPQPPPIRREITFPPGSVEASQPVL 1549
>gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [Homo
sapiens]
Length = 1636
Score = 58.5 bits (140), Expect = 6e-08
Identities = 128/525 (24%), Positives = 171/525 (32%), Gaps = 125/525 (23%)
Query: 1083 EQIKAQLEALELKKTYVLNPLAPE-FIPRALRLQ--HSGSTNKQQQSPPKGKSLHHTQND 1139
E + QL ELKK P AP+ +PR + +G ++ +S P
Sbjct: 701 EAARQQLLDRELKKKPPPRPTAPKPLLPRREESEAVEAGDPPEELRSLPP---------- 750
Query: 1140 HFQNDGIVQPN-PSVLIGNPIRAYTPPPPL----GPHPNLGKSPSPVQRIDPHTGTSILY 1194
D + P P +G+ + PP P GP P+ P P ++G + L
Sbjct: 751 ----DMVAGPRLPDTFLGSATPLHFPPSPFPSSTGPGPHYLSGPLPP---GTYSGPTQLI 803
Query: 1195 VPAVYGGNVVMSVPLPV--PWTGYQGRFAVDPRIITHQAAMAYNMNLLQTHGRGSPIPYG 1252
P G + + P P P Y + PR HG S G
Sbjct: 804 QPRAPGPHAMPVAPGPALYPAPAYTPELGLVPRSSPQ-------------HGVVSSPYVG 850
Query: 1253 LGHHPPVTIGQPQNQHQEKDQHEQNRNGKSDTNNSGPEINKIRTPEKKPTEPKQVDLESN 1312
+G PPV G P + SGPE+ P + Q +
Sbjct: 851 VGPAPPVA-GLPSAPPPQF---------------SGPELAMAVRPATTTVDSIQAPI--- 891
Query: 1313 PQNRSPESRPSVVYPSTKFPRKDNLNPRHINLPLPAPH-----AQYAIPNRHFH------ 1361
P + +P P+ P FP + P PLP P+ A+ IP +H
Sbjct: 892 PSHTAPRPNPTPAPPPPCFP----VPPPQ---PLPTPYTYPAGAKQPIPAQHHFSSGIPA 944
Query: 1362 --PLPQLPRPPFPIPQQHTLL----NQQQNNLPEQ-PNQIPPQPNQVVQQQSQLNQQPQ- 1413
P P++ P P PQ H Q LP Q P+ PPQ ++ QS PQ
Sbjct: 945 GFPAPRIGPQPQPHPQPHPSQAFGPQPPQQPLPLQHPHLFPPQAPGLLPPQSPYPYAPQP 1004
Query: 1414 ----QPPPQLSPAYQAGPNNAFFNSAVAHRPQSPPAEAVIPEQQPPPMLQEGHSPLRAIA 1469
QPPP L GP Q P P HS
Sbjct: 1005 GVLGQPPPPLHTQLYPGP-----------------------AQDPLP----AHSGALPFP 1037
Query: 1470 QPGPILPSHLNSFIDENPSGLPIGEALDRIHGSVALETLRQQQARFQQWSEHHAFLSQGS 1529
PGP P H PS P+G A T+R + Q H S
Sbjct: 1038 SPGPPQPPHPPLAYGPAPSTRPMGP-------QAAPLTIRGPSSAGQSTPSPHLVPSPAP 1090
Query: 1530 VPYPHHHHPHLQHLPQPPLGLHQPPVRADWKLTSSAEDEVETTYS 1574
P P P +PP L + AD L+SS E + T S
Sbjct: 1091 SPGPGPVPPR-PPAAEPPPCLRRGAAAAD-LLSSSPESQHGGTQS 1133
Score = 32.0 bits (71), Expect = 6.0
Identities = 55/252 (21%), Positives = 81/252 (32%), Gaps = 14/252 (5%)
Query: 1145 GIVQPNPSVL-IGNPIRAYTPPPPLGPHPNLGKSPSPVQRIDPHTGTSILYV--PAVYGG 1201
G QP P+ + I A P P +GP P P P Q P L + P ++
Sbjct: 927 GAKQPIPAQHHFSSGIPAGFPAPRIGPQPQPHPQPHPSQAFGPQPPQQPLPLQHPHLFPP 986
Query: 1202 NVVMSVP--LPVPWTGYQGRFAVDPRIITHQAAMAYNMNLLQTHGRGSPIPY---GLGHH 1256
+P P P+ G P + Q + L H P P H
Sbjct: 987 QAPGLLPPQSPYPYAPQPGVLGQPPPPLHTQLYPGPAQDPLPAHSGALPFPSPGPPQPPH 1046
Query: 1257 PPVTIG-QPQNQHQEKDQHEQNRNGKSDTNNSGPEINKIRTPEKK----PTEPKQVDLES 1311
PP+ G P + G S S P + + +P P P+ E
Sbjct: 1047 PPLAYGPAPSTRPMGPQAAPLTIRGPSSAGQSTPSPHLVPSPAPSPGPGPVPPRPPAAEP 1106
Query: 1312 NPQNRSPESRPSVVYPSTKFPRKDNLNPRHINLPLPAPHAQYAIPNRHFHPLPQLPRPPF 1371
P R + ++ S + +P PL P A R L + R P+
Sbjct: 1107 PPCLRRGAAAADLLSSSPESQHGGTQSPGG-GQPLLQPTKVDAAEGRRPQALRLIERDPY 1165
Query: 1372 PIPQQHTLLNQQ 1383
P++ L Q+
Sbjct: 1166 EHPERLRQLQQE 1177
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 57.8 bits (138), Expect = 1e-07
Identities = 111/517 (21%), Positives = 180/517 (34%), Gaps = 62/517 (11%)
Query: 1297 PEKKPTEPKQVDLESNPQNRSPESRPSVVYPSTKFPRKDNLNPRHINLPLPAPHAQYAIP 1356
PE P P + S P+ P P++ P + P L+P PL P + +P
Sbjct: 507 PESSPFSPLEESPLSPPEESPPS--PALETPLSPPPEASPLSPPFEESPLSPPPEE--LP 562
Query: 1357 NRHFHPLPQLPRPPFPIPQQHTLLNQQQNNLPEQPNQIPPQPNQVVQQQSQLNQQPQQPP 1416
+L PP P + PE PP + + + P PP
Sbjct: 563 TSPPPEASRLSPPPEESPMSPPPEESPMSPPPEASRLFPPFEESPLSPPPE--ESPLSPP 620
Query: 1417 PQLSPAYQAGPNNAFFNSAVAHRPQSPPAEA-------VIPEQQPPPMLQEGHSPLRAIA 1469
P+ S P ++ + P SPP E V+ PPP SPL
Sbjct: 621 PEAS-RLSPPPEDSPMSPPPEESPMSPPPEVSRLSPLPVVSRLSPPPE----ESPLSPPP 675
Query: 1470 QPGPILP----SHLNSFIDENPSGLPIGEALDRIHGSVALETLRQQQARFQQWSEHHAFL 1525
+ P P S L+ +++P+ P ++ +L +L +++ E
Sbjct: 676 EESPTSPPPEASRLSPPPEDSPTSPPPEDSPASPPPEDSLMSLPLEESPLLPLPEEPQLC 735
Query: 1526 SQGSVPY--PHHHHPHLQHLPQPPLGLHQPPVRADWKLTSSAEDEVETTYSRFQDLIREL 1583
+ P+ P PHL P+ P H P + L+ E+ L
Sbjct: 736 PRSEGPHLSPRPEEPHLSPRPEEP---HLSPQAEEPHLSPQPEEPCLCAVPEEPHL---- 788
Query: 1584 SHRDQSETRELAEMPPPQSRLLQYRQVQSRSPPAVPSPPSSTDHSSHFSNFNDNSRDIEV 1643
Q+E L+ P P+ L + + P VP P + S+ + S + +
Sbjct: 789 --SPQAEGPHLS--PQPEELHLSPQTEEPHLSP-VPEEPCLSPQPEE-SHLSPQSEEPCL 842
Query: 1644 ASNPAFPQRLPPQIFNSPFSL--------PSEHLAPPPLKYLAPDGAWTFANLQ-QNHLM 1694
+ P L P++ P S P + AP L P G + + L + L
Sbjct: 843 SPRPE-ESHLSPELEKPPLSPRPEKPPEEPGQCPAPEELPLFPPPGEPSLSPLLGEPALS 901
Query: 1695 GPGFPYGLPPLPHRPPQNPFVQIQNHQHAIGQEPFHPLSSRTVSSSSLPSLE-----EY- 1748
PG P L PLP P +P + + +P P S +++++ P+L EY
Sbjct: 902 EPGEP-PLSPLPEELPLSPSGEPSLSPQLMPPDPLPPPLSPIITAAAPPALSPLGELEYP 960
Query: 1749 -------EPRGP-GRPLYQRRISSSSVQPCSEEVSTP 1777
+P P P+ + IS C++ P
Sbjct: 961 FGAKGDSDPESPLAAPILETPISPPPEANCTDPEPVP 997
Score = 48.1 bits (113), Expect = 8e-05
Identities = 130/578 (22%), Positives = 192/578 (33%), Gaps = 107/578 (18%)
Query: 1363 LPQLPRPP----FPIPQQH-TLLNQQQNNLPEQPNQIPPQP-NQVVQQQSQLNQQPQQPP 1416
+P LP P P P++ T + + L P ++P P + + L + P PP
Sbjct: 438 MPLLPPPEESPLSPPPEESPTSPPPEASRLSPPPEELPASPLPEALHLSRPLEESPLSPP 497
Query: 1417 PQ---LSPAYQAGPNNAFFNSAVAHRPQSPPAEAVIPEQQPPPMLQEGHSPLRAIAQPGP 1473
P+ LSP ++ P + S ++ +SPP+ A+ PPP + P
Sbjct: 498 PEESPLSPPPESSPFSPLEESPLSPPEESPPSPALETPLSPPP-------------EASP 544
Query: 1474 ILPSHLNSFIDENPSGLPIGEALDRIHGSVALETLRQQQARFQQWSEHHAFLSQGSVPYP 1533
+ P S + P LP S E R LS P
Sbjct: 545 LSPPFEESPLSPPPEELPT---------SPPPEASR---------------LSPPPEESP 580
Query: 1534 HHHHPHLQHLPQPPLGLHQPPVRADWKLTSSAEDEVETTYSRFQDLIRELSHRDQSETRE 1593
P + PP P + L+ E+ + L S E
Sbjct: 581 MSPPPEESPMSPPPEASRLFPPFEESPLSPPPEESPLSPPPEASRLSPPPEDSPMSPPPE 640
Query: 1594 LAEMPPPQ--SRLLQYRQVQSRSPPAVPSPPSSTDHSSHFSNFNDNSRDIEVASNPAFPQ 1651
+ M PP SRL V SPP SP S S S P
Sbjct: 641 ESPMSPPPEVSRLSPLPVVSRLSPPPEESPLSPPPEES-------------PTSPPPEAS 687
Query: 1652 RLPPQIFNSPFSLPSEHL-APPPLKYLAPDGAWTFANLQQNHLMGPGFPYGLPPLPHRP- 1709
RL P +SP S P E A PP P+ + L+++ L+ PLP P
Sbjct: 688 RLSPPPEDSPTSPPPEDSPASPP-----PEDSLMSLPLEESPLL---------PLPEEPQ 733
Query: 1710 ----PQNPFVQIQNHQHAIGQEPFHPLSSRTVSSSSLPSLEEYEP---RGPGRPLYQRRI 1762
+ P + + + + P P S L S + EP P P +
Sbjct: 734 LCPRSEGPHLSPRPEEPHLSPRPEEPHLSPQAEEPHL-SPQPEEPCLCAVPEEPHLSPQA 792
Query: 1763 SSSSVQPCSEEV----STPQDSLAQCKELQDHSNQSSFNFSSPESWVNTTSSTPYQNIPC 1818
+ P EE+ T + L+ E S Q + SP+S S P +
Sbjct: 793 EGPHLSPQPEELHLSPQTEEPHLSPVPEEPCLSPQPEESHLSPQSEEPCLSPRPEE---- 848
Query: 1819 NGSSRTAQPRELIAPPKTVKPPEDQLKSENLEVSSSFNYSVLQHLGQFPPLMPNKQIAES 1878
S + + + P+ KPPE+ + E F L PL+ ++E
Sbjct: 849 --SHLSPELEKPPLSPRPEKPPEEPGQCPAPEELPLFPPPGEPSLS---PLLGEPALSEP 903
Query: 1879 AN---SSSPQS---SAGGKPAMSYASALRAPPKPRPPP 1910
S P+ S G+P++ S PP P PPP
Sbjct: 904 GEPPLSPLPEELPLSPSGEPSL---SPQLMPPDPLPPP 938
Score = 42.7 bits (99), Expect = 0.003
Identities = 126/541 (23%), Positives = 179/541 (33%), Gaps = 110/541 (20%)
Query: 1403 QQQSQLNQQ-PQQPPPQLSPAYQAGPNNAFFNSAVAHRPQSPPAEAVIPEQQPPPMLQEG 1461
Q ++ LN++ P PPP+ SP + P SPP EA + PP +
Sbjct: 429 QLEAPLNEEMPLLPPPEESP----------LSPPPEESPTSPPPEA---SRLSPPPEELP 475
Query: 1462 HSPL-RAIAQPGPILPSHLNSFIDENPSGLPIGEALDRIHGSVALETLRQQQARFQQWSE 1520
SPL A+ P+ S L+ +E+P P + + F E
Sbjct: 476 ASPLPEALHLSRPLEESPLSPPPEESPLSPP------------------PESSPFSPLEE 517
Query: 1521 HHAFLSQGSVPYPHHHHPHLQHLPQPPLGLHQPPVRADWKLTSSAEDEVETTYSRFQDLI 1580
+ S P P P L PP P + L+ E
Sbjct: 518 SPLSPPEESPPSPALETP----LSPPPEASPLSPPFEESPLSPPPE-------------- 559
Query: 1581 RELSHRDQSETRELAEMPPPQ-SRLLQYRQVQSRSPPAVPSPPSSTDHSSH-FSNFNDNS 1638
EL PPP+ SRL + SPP SP S +S F F ++
Sbjct: 560 ------------ELPTSPPPEASRLSPPPEESPMSPPPEESPMSPPPEASRLFPPFEESP 607
Query: 1639 RDIEVASNPAFP----QRLPPQIFNSPFSLPSEH--LAPPP-LKYLAPDGAWTFANLQQN 1691
+P P RL P +SP S P E ++PPP + L+P +
Sbjct: 608 LSPPPEESPLSPPPEASRLSPPPEDSPMSPPPEESPMSPPPEVSRLSPLPV-------VS 660
Query: 1692 HLMGPGFPYGLPPLPHRPPQNPFVQIQNHQHAIGQEPFHPLSSRTVSS-------SSLPS 1744
L P L P P P +P + P P + +S SLP
Sbjct: 661 RLSPPPEESPLSPPPEESPTSPPPEASRLSPPPEDSPTSPPPEDSPASPPPEDSLMSLPL 720
Query: 1745 LEEYEPRGPGRPLYQRRISSSSVQPCSEEVSTPQDSLAQCKELQDHSNQSSFNFSSP--- 1801
E P P R + P EE L+ E S Q+ SP
Sbjct: 721 EESPLLPLPEEPQLCPRSEGPHLSPRPEE-----PHLSPRPEEPHLSPQAEEPHLSPQPE 775
Query: 1802 ESWVNTTSSTPYQNIPCNGSSRTAQPRELIAPPKTVKPPEDQLKSENLEVSSSFNYSVLQ 1861
E + P+ + G + QP EL P+T +P + E +S S L
Sbjct: 776 EPCLCAVPEEPHLSPQAEGPHLSPQPEELHLSPQTEEPHLSPVPEEPC-LSPQPEESHLS 834
Query: 1862 HLGQFPPLMPNKQIAESANSSSPQSSAGGKPAMSYASALRAPPKPRPPPEQAKKSSDPLS 1921
+ P L P + + SP+ KP +S P+P PPE+ + P
Sbjct: 835 PQSEEPCLSPRPE----ESHLSPELE---KPPLS--------PRPEKPPEEPGQCPAPEE 879
Query: 1922 L 1922
L
Sbjct: 880 L 880
Score = 42.0 bits (97), Expect = 0.006
Identities = 58/236 (24%), Positives = 87/236 (36%), Gaps = 42/236 (17%)
Query: 1247 SPIPYGLGHHPPVTIGQPQNQHQEKDQHEQNRNGKSDTNNSGPEINK---IRTPEKKPTE 1303
SP+P P QP+ H E + + + ++ PE+ K PEK P E
Sbjct: 816 SPVP-----EEPCLSPQPEESHLSPQSEEPCLSPRPEESHLSPELEKPPLSPRPEKPPEE 870
Query: 1304 PKQV----DLESNPQNRSPESRPSVVYPSTKFPRKDNLNPRHINLPLPAPHAQYAIPNRH 1359
P Q +L P P P + P+ P + L+P LPL +P + ++
Sbjct: 871 PGQCPAPEELPLFPPPGEPSLSPLLGEPALSEPGEPPLSPLPEELPL-SPSGEPSLS--- 926
Query: 1360 FHPLPQLPRPPFPIPQQHTLLNQQQNNLPEQPNQIPPQPNQVVQQQSQLNQQPQQPPPQL 1419
PQL PP P+P + P PP + + + + + P
Sbjct: 927 ----PQL-MPPDPLPPPLS---------PIITAAAPPALSPLGELEYPFGAKGDSDPE-- 970
Query: 1420 SPAYQAGPNNAFFNSAVAHRPQSPPAEAVIPEQQPPPMLQEGHSPLRAIAQPGPIL 1475
SP A P + P SPP EA + +P P + SP + PIL
Sbjct: 971 SPL--AAP--------ILETPISPPPEANCTDPEPVPPMILPPSPGSPVGPASPIL 1016
Score = 38.9 bits (89), Expect = 0.049
Identities = 56/230 (24%), Positives = 83/230 (36%), Gaps = 37/230 (16%)
Query: 1280 GKSDTNNSGPEIN--KIRTPE--KKPTEPKQVDLESNPQNRSPESRPSVVYPSTKFPRKD 1335
G D+ +SG + +++TP+ K P P+ +E PQ+ RP P+
Sbjct: 2305 GFVDSPSSGTHLGGLELKTPDVFKAPLTPRASQVE--PQSPGLGLRPQEPPPAQALA--- 2359
Query: 1336 NLNPRHINLPLPAPHAQYAIPNRHFHPLPQLPRPPFP-IPQQHTLLNQQQNNLPEQP-NQ 1393
P P H P + P Q P P P P + +LP P ++
Sbjct: 2360 ---------PSPPSHPDIFRPGSYTDPYAQPPLTPRPQPPPPESCCALPPRSLPSDPFSR 2410
Query: 1394 IPPQPNQVVQQQSQLNQQPQQPPPQLSPAYQAGPNNAFFNSAVAH-----RPQSPPAEAV 1448
+P P Q +Q P P P + A+ P F S + RPQS A
Sbjct: 2411 VPASP-----QSQSSSQSPLTPRPLSAEAFCPSPVTPRFQSPDPYSRPPSRPQSRDPFAP 2465
Query: 1449 I---PEQQPPPMLQE----GHSPLRAIAQPGPILPSHLNSFIDENPSGLP 1491
+ P QPP + + H+ L A P + + PSG P
Sbjct: 2466 LHKPPRPQPPEVAFKAGSLAHTSLGAGGFPAALPAGPAGELHAKVPSGQP 2515
Score = 37.7 bits (86), Expect = 0.11
Identities = 35/115 (30%), Positives = 46/115 (40%), Gaps = 11/115 (9%)
Query: 1375 QQHTLLNQQQNNLPEQPNQIPPQPNQVVQQQSQ-LNQQPQQPPPQLSPAYQAGPNNAFFN 1433
QQ L QQQ +Q Q+ Q Q +QQQ Q L QQ QQ Q Q
Sbjct: 3921 QQQQQLQQQQLQQQQQQQQLQQQQQQQLQQQQQQLQQQQQQQQQQFQQQQQQQQMGLLNQ 3980
Query: 1434 SAVAHRPQSPPAEAVIPEQQPPPMLQEG--HSPLRAIAQPGPILPSHLNSFIDEN 1486
S PQ +QQ L G PL+ + PG + P+ L + ++N
Sbjct: 3981 SRTLLSPQQ--------QQQQQVALGPGMPAKPLQHFSSPGALGPTLLLTGKEQN 4027
Score = 37.7 bits (86), Expect = 0.11
Identities = 97/432 (22%), Positives = 154/432 (35%), Gaps = 78/432 (18%)
Query: 1158 PIRAYTPPPPLGPHPNL-GKSPSPVQRIDPHTGTSILYVPAVYGGNVVMSVPLPVPWTGY 1216
P++ ++ P LGP L GK + V DP + P+ + G PL + T
Sbjct: 4005 PLQHFSSPGALGPTLLLTGKEQNTV---DPAVSSEATEGPSTHQGG-----PLAIGTTPE 4056
Query: 1217 QGRFAVDPRIITHQAAMAYNMNLLQTHGRGSPIPYGLGHHPPVTI-GQPQNQHQ-----E 1270
A +P + + +++ + LL + P P L PP+ + GQ Q Q
Sbjct: 4057 S--MATEPGEV--KPSLSGDSQLLLVQPQPQPQPSSLQLQPPLRLPGQQQQQVSLLHTAG 4112
Query: 1271 KDQHEQNRNGKSDTNNSGPEINKIRTPEKKPTEPKQVDLESNPQNRSPESRPSVVYPSTK 1330
H Q +G S +S P + V L P + + ++ P +
Sbjct: 4113 GGSHGQLGSGSSSEASSVPHL----------LAQPSVSLGDQPGSMT-QNLLGPQQPMLE 4161
Query: 1331 FPRKDNLNPRHINLPLPAPHAQYAIPNRHFHPLPQLPRPPFPIPQQHTLLNQQQNNLPEQ 1390
P ++N P+ P P P Q LP + +P L Q Q L +
Sbjct: 4162 RPMQNNTGPQP---PKPGPVLQSG------QGLPGVGI----MPTVGQLRAQLQGVLAKN 4208
Query: 1391 PN--QIPPQPNQ-----VVQQQSQLNQQPQQPPPQLSPAYQAGPNNAFFNSAVAHRPQSP 1443
P + PQ Q ++Q+Q Q +Q +Q PP P Q P
Sbjct: 4209 PQLRHLSPQQQQQLQALLMQRQLQQSQAVRQTPPYQEPGTQTSPLQGLLG--------CQ 4260
Query: 1444 PAEAVIPEQQPPPMLQEGHSPLRAIAQPGPILPSHLNSFIDENPSGLPIGEALDRIHGSV 1503
P P Q P+ + G P Q P LP+ P L G L +H +
Sbjct: 4261 PQLGGFPGPQTGPLQELGAGPR---PQGPPRLPA--------PPGALSTGPVLGPVHPTP 4309
Query: 1504 ALETLRQQQARFQQWSEHHAFLSQGSVPYPHHHHPHLQHLPQPPLGLHQPPVRADWKLTS 1563
+ ++ + Q S ++ +P H P PQ P L PP R ++
Sbjct: 4310 PPSSPQEPKRPSQLPSPSSQLPTEAQLPPTHPGTPK----PQGPT-LEPPPGR----VSP 4360
Query: 1564 SAEDEVETTYSR 1575
+A +T +S+
Sbjct: 4361 AAAQLADTLFSK 4372
Score = 35.0 bits (79), Expect = 0.71
Identities = 115/512 (22%), Positives = 161/512 (31%), Gaps = 104/512 (20%)
Query: 1388 PEQPNQI----PPQ-PNQVVQQQSQLNQQPQQPPPQLSPAYQAGPNNAFFNSAVAHRPQS 1442
P+ P ++ PPQ P QV P Q P L+PAY P F +A P
Sbjct: 2153 PDSPGELFLKLPPQVPAQV----------PSQDPFGLAPAYPLEPR---FPTA---PPTY 2196
Query: 1443 PPAEAVIPEQQPPPMLQEGHSPLRAIAQPG------PILPSHLNSFIDENPSGLPIGEAL 1496
PP + PPML G S QPG P P H S D P P +L
Sbjct: 2197 PPYPSPTGAPAQPPML--GASSRPGAGQPGEFHTTPPGTPRHQPSTPD--PFLKPRCPSL 2252
Query: 1497 DR--------IHGSVALETLRQQQARFQQWSEHHAFLSQGSVPYPHHHHPHLQHLPQPPL 1548
D + G A E L + + P + P+L + P
Sbjct: 2253 DNLAVPESPGVGGGKASEPLLSPPPFGESRKALEVKKEELGASSPSYGPPNLGFVDSPSS 2312
Query: 1549 GLHQPPVRADWKLTSSAEDEVETTYSRFQDLIRELSHRDQSETRELAEMPP-------PQ 1601
G H + A + Q L ++ + LA PP P
Sbjct: 2313 GTHLGGLELKTPDVFKAPLTPRASQVEPQSPGLGLRPQEPPPAQALAPSPPSHPDIFRPG 2372
Query: 1602 SRLLQYRQVQSRSPPAVPSP------PSSTDHSSHFSNFNDNSRDIEVASNPAFPQRLPP 1655
S Y Q P P P P + S FS + + + +P P+ L
Sbjct: 2373 SYTDPYAQPPLTPRPQPPPPESCCALPPRSLPSDPFSRVPASPQSQSSSQSPLTPRPLSA 2432
Query: 1656 QIF-NSP----FSLPSEHLAPP--------------PLKYLAPDGAWTFANLQQNHLMGP 1696
+ F SP F P + PP P + P+ A+ +L L
Sbjct: 2433 EAFCPSPVTPRFQSPDPYSRPPSRPQSRDPFAPLHKPPRPQPPEVAFKAGSLAHTSLGAG 2492
Query: 1697 GFPYGLPPLPHRPPQNPFVQIQNHQHA---IGQEPFHPLSSRTVSSSSLPSLEEYEPRGP 1753
GFP LP P HA GQ P S T + PS P
Sbjct: 2493 GFPAALPAGP-----------AGELHAKVPSGQPPNFVRSPGTGAFVGTPS--------P 2533
Query: 1754 GRPLYQRRISSSSVQPCSEEVSTPQDSLAQCKELQDHSNQSSFNFSSPESWVNTTSSTPY 1813
R + + + S++P PQ L + H P+S T ++ +
Sbjct: 2534 MRFTFPQAVGEPSLKP-----PVPQPGLPPPHGINSHFGPGP-TLGKPQSTNYTVATGNF 2587
Query: 1814 QNI-----PCNGSSRTAQPRELIAPPKTVKPP 1840
P +GS+ + + PP + PP
Sbjct: 2588 HPSGSPLGPSSGSTGESYGLSPLRPPSVLPPP 2619
Score = 34.7 bits (78), Expect = 0.93
Identities = 68/305 (22%), Positives = 108/305 (35%), Gaps = 36/305 (11%)
Query: 1373 IPQQHTLLNQQQNNLPEQPNQIPPQPNQVVQQQSQLNQQPQ--QPP--------PQLSPA 1422
+ QQ QQQ+ L + Q Q VQ L +PQ PP QLSP
Sbjct: 3734 LQQQQQQQQQQQHLLGQVAIQQQQQQGPGVQTNQALGPKPQGLMPPSSHQGLLVQQLSPQ 3793
Query: 1423 YQAGPNNAFFNSAVAHRPQSPPAEAVIPEQQPPPMLQEGHSPLRAIAQPGPILPSHLNSF 1482
GP P AV+ +Q P + +G P R + S
Sbjct: 3794 PPQGPQGML----------GPAQVAVLQQQHPGALGPQG--PHRQVLM--------TQSR 3833
Query: 1483 IDENPSGLPIGEALDRIHGSVALETLRQQQARFQQWSEHHAFLSQGSVPYPHHHHPHLQH 1542
+ +P G+ L H V + +QQQ QQ S Q S+ H P L
Sbjct: 3834 VLSSPQLAQQGQGL-MGHRLVTAQQQQQQQQHQQQGSMAGLSHLQQSL-MSHSGQPKLSA 3891
Query: 1543 LPQPPLG--LHQPPVRADWKLTSSAEDEVETTYSRFQDLIRELSHRDQSETRELAEMPPP 1600
P L Q ++ +L + +++ Q +++ + Q + ++ ++
Sbjct: 3892 QPMGSLQQLQQQQQLQQQQQLQQQQQQQLQQQQQLQQQQLQQQQQQQQLQQQQQQQLQQQ 3951
Query: 1601 QSRLLQYRQVQSRS-PPAVPSPPSSTDHSSHFSNFNDNSRDIEVASNPAFPQRLPPQIFN 1659
Q +L Q +Q Q + + S + +VA P P + P Q F+
Sbjct: 3952 QQQLQQQQQQQQQQFQQQQQQQQMGLLNQSRTLLSPQQQQQQQVALGPGMPAK-PLQHFS 4010
Query: 1660 SPFSL 1664
SP +L
Sbjct: 4011 SPGAL 4015
Score = 31.6 bits (70), Expect = 7.9
Identities = 51/196 (26%), Positives = 71/196 (36%), Gaps = 27/196 (13%)
Query: 1597 MPPPQSRLLQYRQVQSRSPPAVPSP-------PSSTDHSSHFSNFNDNSR----DIEVAS 1645
+PP S LLQ+ V SPP+ SP PS +D + + E S
Sbjct: 1020 LPPQCSPLLQHSLVPQNSPPSQCSPPALPLSVPSPLSPIGKVVGVSDEAELHEMETEKVS 1079
Query: 1646 NPAFPQRLPPQIFNSPFSLPSEHLA-PPPLKYLAPDGAWTFANLQQN--HLMGPGFPYGL 1702
P P P SP P L+ P P A D F+ L ++ L G P G
Sbjct: 1080 EPECPALEPSA--TSPLPSPMGDLSCPAPSPAPALD---DFSGLGEDTAPLDGIDAP-GS 1133
Query: 1703 PPLPHRPPQNPFVQIQNHQHAIGQEPFHPLSSRTV-------SSSSLPSLEEYEPRGPGR 1755
P P + P + +++ + E P++ V + P E+ EPR P
Sbjct: 1134 QPEPGQTPGSLASELKGSPVLLDPEELAPVTPMEVYPECKQTAGQGSPCEEQEEPRAPVA 1193
Query: 1756 PLYQRRISSSSVQPCS 1771
P I S V S
Sbjct: 1194 PTPPTLIKSDIVNEIS 1209
>gi|150417989 cyclin K isoform 1 [Homo sapiens]
Length = 580
Score = 57.8 bits (138), Expect = 1e-07
Identities = 95/364 (26%), Positives = 123/364 (33%), Gaps = 91/364 (25%)
Query: 1361 HPLPQLPRPPF--PIPQQHTLLNQQ--QNNLPEQPNQIPPQPNQVVQQQSQLNQQPQQPP 1416
H QL +PP P PQ + Q Q++ P QP Q PQ Q QQQ Q QQP++P
Sbjct: 268 HTPHQLQQPPSLQPTPQVPQVQQSQPSQSSEPSQPQQKDPQ--QPAQQQ-QPAQQPKKPS 324
Query: 1417 PQLSPAYQAGPNNAFFNSAVAHRPQSPPAEAVIPEQQPP--PMLQEGHSPLRAIAQPGPI 1474
PQ S Q AV SP E E PP P ++ H PL P
Sbjct: 325 PQPSSPRQV-------KRAVV---VSPKEENKAAEPPPPKIPKIETTHPPLPPAHPPPDR 374
Query: 1475 LPSHLNSFIDENPSGLPIGEALDRIHGSVALETLRQQQARFQQWSEHHAFLSQGSVPYPH 1534
P P +GEA G V L + Q + + P P
Sbjct: 375 KP----------PLAAALGEA--EPPGPVDATDLPKVQ------------IPPPAHPAPV 410
Query: 1535 HHHPHLQHLPQPPLGLHQPPVRADWKLTSSAEDEVETTYSRFQDLIRELSHRDQSETREL 1594
H P L H P PP PP +++++ Y Q +++ +E
Sbjct: 411 HQPPPLPHRPPPP-----PPSSYMTGMSTTSSYMSGEGYQSLQSMMK-------TEGPSY 458
Query: 1595 AEMPP---PQSRLLQYRQVQSRSPPAVPSPPSSTDHSSHFSNFNDNSRDIEVASNPAFPQ 1651
+PP P + L + V +PP P PP
Sbjct: 459 GALPPAYGPPAHLPYHPHVYPPNPPPPPVPP----------------------------- 489
Query: 1652 RLPPQIFNSPFSLPSEHLAPPPLKYLAPDGAWTFANLQQNHLMGPGFP--YGLPPLPHRP 1709
PP F P P PPP P+ L H + P P GLPP + P
Sbjct: 490 --PPASFPPPAIPPPTPGYPPPPPTYNPNFPPPPPRLPPTHAVPPHPPPGLGLPPASYPP 547
Query: 1710 PQNP 1713
P P
Sbjct: 548 PAVP 551
Score = 42.0 bits (97), Expect = 0.006
Identities = 49/237 (20%), Positives = 87/237 (36%), Gaps = 28/237 (11%)
Query: 1269 QEKDQHEQNRNGKSDTNNSGPEINKIRTPE----KKPTEPKQVDLESNPQNRSPESRPSV 1324
Q+ H ++ + + P++ +++ + +P++P+Q D + Q + P +P
Sbjct: 263 QQMPHHTPHQLQQPPSLQPTPQVPQVQQSQPSQSSEPSQPQQKDPQQPAQQQQPAQQPKK 322
Query: 1325 VYPSTKFPRKDN----LNPRHINLPLPAPHAQYAIPNRHFHPLPQLPRPPFPIPQQHTLL 1380
P PR+ ++P+ N P + PLP PP P L
Sbjct: 323 PSPQPSSPRQVKRAVVVSPKEENKAAEPPPPKIPKIETTHPPLPPAHPPPDRKPPLAAAL 382
Query: 1381 NQQQ-------NNLPEQPNQIPPQPNQV-VQQQSQLNQQPQQPPP-------QLSPAYQA 1425
+ + +LP+ QIPP + V Q L +P PPP + +Y +
Sbjct: 383 GEAEPPGPVDATDLPKV--QIPPPAHPAPVHQPPPLPHRPPPPPPSSYMTGMSTTSSYMS 440
Query: 1426 GPNNAFFNSAVAHRPQSPPAEAVIPEQQPPPMLQEGHSPLRAIAQPGPILPSHLNSF 1482
G + S + P+ +P PP H + P P +P SF
Sbjct: 441 GEG---YQSLQSMMKTEGPSYGALPPAYGPPAHLPYHPHVYPPNPPPPPVPPPPASF 494
Score = 39.3 bits (90), Expect = 0.038
Identities = 52/198 (26%), Positives = 68/198 (34%), Gaps = 42/198 (21%)
Query: 1526 SQGSVPYPHHHHPHLQHLPQPPLGLHQPPVRADWKLTSSAEDEVETTYSRFQDLIRELSH 1585
SQG P HH PH L QPP P V +++
Sbjct: 259 SQGKQQMP-HHTPH--QLQQPPSLQPTPQV----------------------PQVQQSQP 293
Query: 1586 RDQSETRELAEMPPPQSRLLQYRQVQSRSPPAVPSPPSSTDHSSHFSNFNDNSRDIEVAS 1645
SE + + P Q Q Q + P PS P + S +N A+
Sbjct: 294 SQSSEPSQPQQKDPQQPAQQQQPAQQPKKPSPQPSSPRQVKRAVVVSPKEENK-----AA 348
Query: 1646 NPAFPQRLPPQIFNSPFSLPSEHLAP---PPLK----YLAPDGAWTFANLQQNHLMGPGF 1698
P P+ P+I + LP H P PPL P G +L + + P
Sbjct: 349 EPPPPK--IPKIETTHPPLPPAHPPPDRKPPLAAALGEAEPPGPVDATDLPKVQIPPPAH 406
Query: 1699 P---YGLPPLPHRPPQNP 1713
P + PPLPHRPP P
Sbjct: 407 PAPVHQPPPLPHRPPPPP 424
Score = 35.8 bits (81), Expect = 0.42
Identities = 35/130 (26%), Positives = 43/130 (33%), Gaps = 28/130 (21%)
Query: 1347 PAPHAQYAIPNRHFHPLPQLPRPPFPIPQQHTLLNQQQNNLPEQPNQIPPQPNQVVQQQS 1406
P H Y + H +P P P PP P P + P P IPP
Sbjct: 467 PPAHLPY---HPHVYP-PNPPPPPVPPPPA---------SFP--PPAIPPPTPGYPPPPP 511
Query: 1407 QLNQQPQQPPPQLSPAYQAGPNNAFFNSAVAHRPQSPPAEAVIPEQQPPPMLQEGHSPLR 1466
N PPP+L P + A P PP + P PPP + G P
Sbjct: 512 TYNPNFPPPPPRLPPTH-------------AVPPHPPPGLGLPPASYPPPAVPPGGQPPV 558
Query: 1467 AIAQPGPILP 1476
P P +P
Sbjct: 559 PPPIPPPGMP 568
>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 [Homo
sapiens]
Length = 2191
Score = 57.0 bits (136), Expect = 2e-07
Identities = 127/595 (21%), Positives = 196/595 (32%), Gaps = 90/595 (15%)
Query: 1347 PAPHAQYAIPNRHFHPLPQLPRPPFPIPQQHTLLNQQQNNLPEQPN--QIPPQPNQV-VQ 1403
P P Y P +P+ R P + Q + + +PPQ Q V
Sbjct: 486 PYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQDSGDATWKETFWLMPPQYGQQGVS 545
Query: 1404 QQSQLNQQP---QQP-PPQLSPAYQAGPNNAFFNSAVAHRPQSPPAEAVIPEQQPPPML- 1458
Q QQP QQP PP L P Q P+ S ++PQ ++ + PP+
Sbjct: 546 GYCQQGQQPYYSQQPQPPHLPPQAQYLPSQ----SQQRYQPQQDMSQEGYGTRSQPPLAP 601
Query: 1459 -QEGHSPLRAIAQPGPILPSHLNSFIDENPSGLPIGEALDRIHGSVALETLRQQQARFQQ 1517
+ H L I Q P L+ ID+ P+G TL +
Sbjct: 602 GKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEA--------------TLSSAVSASGS 647
Query: 1518 WSEHHAFLSQGSVPYPHHHHPHLQHLPQPPLGLHQPPVRADWKLTSSAEDEVETTYSRFQ 1577
S + P+ H PHL +P P PV + S +
Sbjct: 648 TSSQGDQSNPAQSPFSPHASPHLSSIPGGP---SPSPVGSPVGSNQSRSGPISPASIPGS 704
Query: 1578 DLIREL--SHRDQSETRELAEMPPPQSR-----------LLQYRQVQSRSPPAVPSPPSS 1624
+ + S + S L++ P PQ R + QY Q+ P P P
Sbjct: 705 QMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQT-GPSMSPHPSPG 763
Query: 1625 TDHSSHFSNFNDNSRDIEVASNPAFPQRLPPQIFNSPFSLPSEHLAPPPLKYLAPDGAWT 1684
+ S+F ++ S+ + ++ +S P + P Y P
Sbjct: 764 GQMHAGISSFQQSN------SSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMG 817
Query: 1685 FANLQQNHLMGPGFPYGLPPLPHRPPQNPFVQIQNHQHAIGQEPFHPLSSRTVSSSSLPS 1744
+ Q H GP P G PL P +QN PF S SS S
Sbjct: 818 ISANNQMHGQGPSQPCGAVPLGRMPSAG----MQN-------RPFPGNMSSMTPSSPGMS 866
Query: 1745 LEEYEPRGPGRPLYQRRISSSS---VQPCSEEVSTPQDSLAQCKELQDHSNQSSFNFSSP 1801
+ GP P R+ ++ +Q + + Q S Q SS +S P
Sbjct: 867 QQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMN--QSGLMASSSPYSQP 924
Query: 1802 ---ESWVNTTSSTPYQNIPC--NGSSRTAQPRELIAPPKTVKP--------------PED 1842
S + T + PY P N S+ + ++++P ++ P PE
Sbjct: 925 MNNSSSLMNTQAPPYSMAPAMVNSSAASVGLADMMSPGESKLPLPLKADGKEEGTPQPES 984
Query: 1843 QLKSENLEVSSSFNYSVLQHLGQFP--PLMPNKQIAESANSSSPQSS---AGGKP 1892
+ K + ++ + + LG P L ++ + SP SS G KP
Sbjct: 985 KSKKSSSSTTTGEKITKVYELGNEPERKLWVDRYLTFMEERGSPVSSLPAVGKKP 1039
Score = 34.3 bits (77), Expect = 1.2
Identities = 62/284 (21%), Positives = 101/284 (35%), Gaps = 57/284 (20%)
Query: 1241 QTHGRGSPI---PYGLGHHPPVTIGQPQNQHQEKDQHEQNRNGKSDTNNSGPEINKIRTP 1297
Q G+G P PYG GH P + QP + +H G + G N +
Sbjct: 1287 QYPGQGPPSGQPPYG-GHQPGLYPQQPNYK-----RHMDGMYGPPAKRHEGDMYNMQYSS 1340
Query: 1298 EKKPTEPKQVDLESNPQNRSPESRPSVVYPSTKFP-----RKDNLNPRHINLPLPAPHAQ 1352
+++ + S P R + + Y + + + P+ + PL + ++
Sbjct: 1341 QQQEMYNQYGGSYSGPDRRPIQGQYPYPYSRERMQGPGQIQTHGIPPQMMGGPLQSSSSE 1400
Query: 1353 YAIPN----RHFHPLP----QLPRPPFPIPQQHTLLNQQQNNLPEQP-NQIPPQPNQVVQ 1403
N R+ P P Q P P P + +P+Q N P+ V Q
Sbjct: 1401 GPQQNMWAARNDMPYPYQNRQGPGGPTQAPPYPGMNRTDDMMVPDQRINHESQWPSHVSQ 1460
Query: 1404 QQ----SQLNQQPQQPPPQLSPAYQA----------GPNNAFFNSAVAHR---------- 1439
+Q S + QP PPQ P+YQ P+ A F ++ +R
Sbjct: 1461 RQPYMSSSASMQPITRPPQ--PSYQTPPSLPNHISRAPSPASFQRSLENRMSPSKSPFLP 1518
Query: 1440 --------PQSPPAEAVIPEQQPPPMLQEGHSPLRAIAQPGPIL 1475
P P ++ P QPPP+ +E P ++ P+L
Sbjct: 1519 SMKMQKVMPTVPTSQVTGPPPQPPPIRREITFPPGSVEASQPVL 1562
>gi|48255900 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a2 isoform a [Homo sapiens]
Length = 1590
Score = 56.2 bits (134), Expect = 3e-07
Identities = 88/333 (26%), Positives = 122/333 (36%), Gaps = 57/333 (17%)
Query: 1166 PPLGPHPNLGKSPSPVQRIDPHTGTSILYVPAVYG---GNVVMSVPLPV------PWTG- 1215
P GP P G SP P+ P G S V ++ G G +S P+P P G
Sbjct: 11 PHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPMPTMGSTDFPQEGM 70
Query: 1216 YQGRFAVDPRIITHQAAMAYNMNLLQTHGRGSPIPYGLGHHPPVTIGQPQNQHQEKDQHE 1275
+Q +D H + +++ G G P HP + G PQ+ DQH
Sbjct: 71 HQMHKPIDG---IHDKGIVEDIHCGSMKGTGMRPP-----HPGM--GPPQSP---MDQHS 117
Query: 1276 QNRNGKSDTNNSGPEINKIRTPEKKPTEPKQVDLESNPQNRSPESRPSVVYPSTKFPRKD 1335
Q + PE PT P+ P S+P + P
Sbjct: 118 QGYMSPHPSPLGAPEHVSSPMSGGGPTPPQM-----------PPSQPGALIPG------- 159
Query: 1336 NLNPRHINLPL--PAPHAQYAIPNRHFHPLP--QLPRPPFPIPQQHTLLNQQQNNLP--E 1389
+P+ ++ P P+P + + L L R P+P+ L Q + LP +
Sbjct: 160 --DPQAMSQPNRGPSPFSPVQLHQLRAQILAYKMLARGQ-PLPETLQLAVQGKRTLPGLQ 216
Query: 1390 QPNQIPPQPNQVVQQQSQLNQQPQQPPPQLSPAYQAGPNNAFFNSAVAHRPQ----SPPA 1445
Q Q Q Q QQQ Q QQPQQ PPQ Q P +N P+ S P
Sbjct: 217 QQQQQQQQQQQQQQQQQQQQQQPQQQPPQPQTQQQQQPALVNYNRPSGPGPELSGPSTPQ 276
Query: 1446 EAVIPEQ--QPPPMLQEGHSPLRAIAQPGPILP 1476
+ +P +P P P A A PGP +P
Sbjct: 277 KLPVPAPGGRPSPAPPAAAQP-PAAAVPGPSVP 308
Score = 53.1 bits (126), Expect = 3e-06
Identities = 86/322 (26%), Positives = 117/322 (36%), Gaps = 33/322 (10%)
Query: 1163 TPPPPLGPHPNLGKSPSPV-QRIDPHTGTSILYVPAVYGGNVVMSVPLPVPWTG-YQGRF 1220
+P P LGP P G SP V + P G + P G+ P G +Q
Sbjct: 22 SPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPMPTMGST------DFPQEGMHQMHK 75
Query: 1221 AVDPRIITHQAAMAYNMNLLQTHGRGSPIPY-GLGHHPPVTIGQPQNQHQEKDQHEQNRN 1279
+D H + +++ G G P+ G+G PP + P +QH +
Sbjct: 76 PIDG---IHDKGIVEDIHCGSMKGTGMRPPHPGMG--PPQS---PMDQHSQGYMSPHPSP 127
Query: 1280 GKSDTNNSGPEINKIRTPEKKPTEPKQVDLESNPQNRS-PESRPSVVYPSTKFP-RKDNL 1337
+ + S P TP + P + +PQ S P PS P R L
Sbjct: 128 LGAPEHVSSPMSGGGPTPPQMPPSQPGALIPGDPQAMSQPNRGPSPFSPVQLHQLRAQIL 187
Query: 1338 NPRHINLPLPAPHA-QYAIPNRHFHPLPQLPRPPFPIPQQHTLLNQQQNNLPEQPNQIPP 1396
+ + P P Q A+ + P Q + QQ QQQ +QP Q PP
Sbjct: 188 AYKMLARGQPLPETLQLAVQGKRTLPGLQQQQQQ---QQQQQQQQQQQQQQQQQPQQQPP 244
Query: 1397 QPNQVVQQQSQL--NQQPQQPPPQLSPAYQAGPNNAFFNSAVAHRPQSPPAEAVIPEQQP 1454
QP QQQ L +P P P+LS GP+ P P+ A QP
Sbjct: 245 QPQTQQQQQPALVNYNRPSGPGPELS-----GPSTP--QKLPVPAPGGRPSPAPPAAAQP 297
Query: 1455 PPMLQEGHS-PLRAIAQPGPIL 1475
P G S P A QP P+L
Sbjct: 298 PAAAVPGPSVPQPAPGQPSPVL 319
Score = 47.8 bits (112), Expect = 1e-04
Identities = 84/387 (21%), Positives = 129/387 (33%), Gaps = 88/387 (22%)
Query: 1114 LQHSGSTNKQQQSPPKGKSLHHTQNDHFQNDGIVQP-NPSVLIGNPIRAYTPPPPLGPHP 1172
+ H T P +G H D + GIV+ + + G +R PHP
Sbjct: 53 VSHPMPTMGSTDFPQEGMHQMHKPIDGIHDKGIVEDIHCGSMKGTGMRP--------PHP 104
Query: 1173 NLGKSPSPVQR-----IDPHTGT----SILYVPAVYGGNVVMSVPLPVPWTGYQGRFAVD 1223
+G SP+ + + PH + P GG +P P G D
Sbjct: 105 GMGPPQSPMDQHSQGYMSPHPSPLGAPEHVSSPMSGGGPTPPQMPPSQPGALIPG----D 160
Query: 1224 PRIITHQAAMAYNMNLLQTH------------GRGSPIPYGL-----GHHPPVTIGQPQN 1266
P+ ++ + +Q H RG P+P L G + Q Q
Sbjct: 161 PQAMSQPNRGPSPFSPVQLHQLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGLQQQQQ 220
Query: 1267 QHQEKDQHEQNRNGKSDTNNSGPEINKIRTPEKKPTEPKQVDLESNPQ----NRSPESRP 1322
Q Q++ Q +Q + + + P+++P +P Q + P NR P
Sbjct: 221 QQQQQQQQQQQQQQQQ------------QQPQQQPPQP-QTQQQQQPALVNYNRPSGPGP 267
Query: 1323 SVVYPSTKFPRKDNLNPRHINLPLPAPHAQYAIPNRHFHPLPQLPRPPFPIPQQHTLLNQ 1382
+ PST P+ + +P P A P P +P P P P
Sbjct: 268 ELSGPST---------PQKLPVPAPGGRPSPAPPAAAQPPAAAVPGPSVPQPA------- 311
Query: 1383 QQNNLPEQPNQIPPQPNQVVQ-QQSQLNQQPQQPPPQLSPAYQAGPNNAFFNSAVAHRPQ 1441
P QP+ V+Q QQ Q P Q P L P + +AHR Q
Sbjct: 312 ------------PGQPSPVLQLQQKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQ 359
Query: 1442 SPPAEAVIPEQQPPPMLQEGHSPLRAI 1468
+P PP + + L+A+
Sbjct: 360 ELEN---LPGSLPPDLRTKATVELKAL 383
Score = 35.8 bits (81), Expect = 0.42
Identities = 78/339 (23%), Positives = 114/339 (33%), Gaps = 62/339 (18%)
Query: 1415 PPPQLSPAYQAGPNNAFFNSAVAHRPQSPPAEAVIPEQQPPPMLQEG----HSPLRAIAQ 1470
P P L P+ GP+ +S + P P +P QEG H P+ I
Sbjct: 23 PGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPMPTMGSTDFPQEGMHQMHKPIDGIHD 82
Query: 1471 PGPILPSHLNSFIDE-----NPSGLPIGEALDRIHGSVALETLRQQQARFQQWSEHHAFL 1525
G + H S +P P +D+ H + EH +
Sbjct: 83 KGIVEDIHCGSMKGTGMRPPHPGMGPPQSPMDQ-HSQGYMSPHPSPLGA----PEHVSSP 137
Query: 1526 SQGSVPYPHHHHPHL---------QHLPQP--------PLGLHQPPVRAD---WKLTSSA 1565
G P P P Q + QP P+ LHQ +RA +K+ +
Sbjct: 138 MSGGGPTPPQMPPSQPGALIPGDPQAMSQPNRGPSPFSPVQLHQ--LRAQILAYKMLARG 195
Query: 1566 EDEVETTYSRFQDLIRELSHRDQSETRELAEMPPPQSRLLQYRQVQSRSPPAVPSPPSST 1625
+ ET Q R L Q + ++ + Q + Q +Q Q + P P +
Sbjct: 196 QPLPETLQLAVQGK-RTLPGLQQQQQQQQQQQQQQQQQQQQQQQPQQQPP----QPQTQQ 250
Query: 1626 DHSSHFSNFNDNSRDIEVASNPAFPQRLPPQIFNSPFSLPSEHLAPPPLKYLAPDGAWTF 1685
N+N S S P+ PQ+LP +P PS PP P A
Sbjct: 251 QQQPALVNYNRPSGPGPELSGPSTPQKLP---VPAPGGRPS---PAPPAAAQPPAAA--- 301
Query: 1686 ANLQQNHLMGPGFPYGLPPLPHRPPQNPFVQIQNHQHAI 1724
+ GP P P P +P +P +Q+Q Q I
Sbjct: 302 -------VPGPSVP---QPAPGQP--SPVLQLQQKQSRI 328
Score = 33.1 bits (74), Expect = 2.7
Identities = 47/177 (26%), Positives = 64/177 (36%), Gaps = 25/177 (14%)
Query: 1388 PEQPNQIPPQPNQVVQQQSQLNQQPQQPPPQLSPAYQAGPNNAFFNSAVAHRPQSPPAE- 1446
P P PPQ + Q SQ P P P +P + + P + PQ PP++
Sbjct: 101 PPHPGMGPPQ--SPMDQHSQGYMSPH-PSPLGAPEHVSSP----MSGGGPTPPQMPPSQP 153
Query: 1447 -AVIPEQQPPPMLQEGHSPLRAIAQPGPILPSHLNSFIDENPS------GLPIGEALD-R 1498
A+IP P M Q P P P L+ + + G P+ E L
Sbjct: 154 GALIPGD-PQAMSQPNRGP-------SPFSPVQLHQLRAQILAYKMLARGQPLPETLQLA 205
Query: 1499 IHGSVALETLRQQQARFQQWSEHHAFLSQGSV-PYPHHHHPHLQHLPQPPLGLHQPP 1554
+ G L L+QQQ + QQ + Q P P Q QP L + P
Sbjct: 206 VQGKRTLPGLQQQQQQQQQQQQQQQQQQQQQQQPQQQPPQPQTQQQQQPALVNYNRP 262
>gi|48255898 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a2 isoform b [Homo sapiens]
Length = 1572
Score = 56.2 bits (134), Expect = 3e-07
Identities = 88/333 (26%), Positives = 122/333 (36%), Gaps = 57/333 (17%)
Query: 1166 PPLGPHPNLGKSPSPVQRIDPHTGTSILYVPAVYG---GNVVMSVPLPV------PWTG- 1215
P GP P G SP P+ P G S V ++ G G +S P+P P G
Sbjct: 11 PHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPMPTMGSTDFPQEGM 70
Query: 1216 YQGRFAVDPRIITHQAAMAYNMNLLQTHGRGSPIPYGLGHHPPVTIGQPQNQHQEKDQHE 1275
+Q +D H + +++ G G P HP + G PQ+ DQH
Sbjct: 71 HQMHKPIDG---IHDKGIVEDIHCGSMKGTGMRPP-----HPGM--GPPQSP---MDQHS 117
Query: 1276 QNRNGKSDTNNSGPEINKIRTPEKKPTEPKQVDLESNPQNRSPESRPSVVYPSTKFPRKD 1335
Q + PE PT P+ P S+P + P
Sbjct: 118 QGYMSPHPSPLGAPEHVSSPMSGGGPTPPQM-----------PPSQPGALIPG------- 159
Query: 1336 NLNPRHINLPL--PAPHAQYAIPNRHFHPLP--QLPRPPFPIPQQHTLLNQQQNNLP--E 1389
+P+ ++ P P+P + + L L R P+P+ L Q + LP +
Sbjct: 160 --DPQAMSQPNRGPSPFSPVQLHQLRAQILAYKMLARGQ-PLPETLQLAVQGKRTLPGLQ 216
Query: 1390 QPNQIPPQPNQVVQQQSQLNQQPQQPPPQLSPAYQAGPNNAFFNSAVAHRPQ----SPPA 1445
Q Q Q Q QQQ Q QQPQQ PPQ Q P +N P+ S P
Sbjct: 217 QQQQQQQQQQQQQQQQQQQQQQPQQQPPQPQTQQQQQPALVNYNRPSGPGPELSGPSTPQ 276
Query: 1446 EAVIPEQ--QPPPMLQEGHSPLRAIAQPGPILP 1476
+ +P +P P P A A PGP +P
Sbjct: 277 KLPVPAPGGRPSPAPPAAAQP-PAAAVPGPSVP 308
Score = 53.1 bits (126), Expect = 3e-06
Identities = 86/322 (26%), Positives = 117/322 (36%), Gaps = 33/322 (10%)
Query: 1163 TPPPPLGPHPNLGKSPSPV-QRIDPHTGTSILYVPAVYGGNVVMSVPLPVPWTG-YQGRF 1220
+P P LGP P G SP V + P G + P G+ P G +Q
Sbjct: 22 SPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPMPTMGST------DFPQEGMHQMHK 75
Query: 1221 AVDPRIITHQAAMAYNMNLLQTHGRGSPIPY-GLGHHPPVTIGQPQNQHQEKDQHEQNRN 1279
+D H + +++ G G P+ G+G PP + P +QH +
Sbjct: 76 PIDG---IHDKGIVEDIHCGSMKGTGMRPPHPGMG--PPQS---PMDQHSQGYMSPHPSP 127
Query: 1280 GKSDTNNSGPEINKIRTPEKKPTEPKQVDLESNPQNRS-PESRPSVVYPSTKFP-RKDNL 1337
+ + S P TP + P + +PQ S P PS P R L
Sbjct: 128 LGAPEHVSSPMSGGGPTPPQMPPSQPGALIPGDPQAMSQPNRGPSPFSPVQLHQLRAQIL 187
Query: 1338 NPRHINLPLPAPHA-QYAIPNRHFHPLPQLPRPPFPIPQQHTLLNQQQNNLPEQPNQIPP 1396
+ + P P Q A+ + P Q + QQ QQQ +QP Q PP
Sbjct: 188 AYKMLARGQPLPETLQLAVQGKRTLPGLQQQQQQ---QQQQQQQQQQQQQQQQQPQQQPP 244
Query: 1397 QPNQVVQQQSQL--NQQPQQPPPQLSPAYQAGPNNAFFNSAVAHRPQSPPAEAVIPEQQP 1454
QP QQQ L +P P P+LS GP+ P P+ A QP
Sbjct: 245 QPQTQQQQQPALVNYNRPSGPGPELS-----GPSTP--QKLPVPAPGGRPSPAPPAAAQP 297
Query: 1455 PPMLQEGHS-PLRAIAQPGPIL 1475
P G S P A QP P+L
Sbjct: 298 PAAAVPGPSVPQPAPGQPSPVL 319
Score = 47.8 bits (112), Expect = 1e-04
Identities = 84/387 (21%), Positives = 129/387 (33%), Gaps = 88/387 (22%)
Query: 1114 LQHSGSTNKQQQSPPKGKSLHHTQNDHFQNDGIVQP-NPSVLIGNPIRAYTPPPPLGPHP 1172
+ H T P +G H D + GIV+ + + G +R PHP
Sbjct: 53 VSHPMPTMGSTDFPQEGMHQMHKPIDGIHDKGIVEDIHCGSMKGTGMRP--------PHP 104
Query: 1173 NLGKSPSPVQR-----IDPHTGT----SILYVPAVYGGNVVMSVPLPVPWTGYQGRFAVD 1223
+G SP+ + + PH + P GG +P P G D
Sbjct: 105 GMGPPQSPMDQHSQGYMSPHPSPLGAPEHVSSPMSGGGPTPPQMPPSQPGALIPG----D 160
Query: 1224 PRIITHQAAMAYNMNLLQTH------------GRGSPIPYGL-----GHHPPVTIGQPQN 1266
P+ ++ + +Q H RG P+P L G + Q Q
Sbjct: 161 PQAMSQPNRGPSPFSPVQLHQLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGLQQQQQ 220
Query: 1267 QHQEKDQHEQNRNGKSDTNNSGPEINKIRTPEKKPTEPKQVDLESNPQ----NRSPESRP 1322
Q Q++ Q +Q + + + P+++P +P Q + P NR P
Sbjct: 221 QQQQQQQQQQQQQQQQ------------QQPQQQPPQP-QTQQQQQPALVNYNRPSGPGP 267
Query: 1323 SVVYPSTKFPRKDNLNPRHINLPLPAPHAQYAIPNRHFHPLPQLPRPPFPIPQQHTLLNQ 1382
+ PST P+ + +P P A P P +P P P P
Sbjct: 268 ELSGPST---------PQKLPVPAPGGRPSPAPPAAAQPPAAAVPGPSVPQPA------- 311
Query: 1383 QQNNLPEQPNQIPPQPNQVVQ-QQSQLNQQPQQPPPQLSPAYQAGPNNAFFNSAVAHRPQ 1441
P QP+ V+Q QQ Q P Q P L P + +AHR Q
Sbjct: 312 ------------PGQPSPVLQLQQKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQ 359
Query: 1442 SPPAEAVIPEQQPPPMLQEGHSPLRAI 1468
+P PP + + L+A+
Sbjct: 360 ELEN---LPGSLPPDLRTKATVELKAL 383
Score = 35.8 bits (81), Expect = 0.42
Identities = 78/339 (23%), Positives = 114/339 (33%), Gaps = 62/339 (18%)
Query: 1415 PPPQLSPAYQAGPNNAFFNSAVAHRPQSPPAEAVIPEQQPPPMLQEG----HSPLRAIAQ 1470
P P L P+ GP+ +S + P P +P QEG H P+ I
Sbjct: 23 PGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPMPTMGSTDFPQEGMHQMHKPIDGIHD 82
Query: 1471 PGPILPSHLNSFIDE-----NPSGLPIGEALDRIHGSVALETLRQQQARFQQWSEHHAFL 1525
G + H S +P P +D+ H + EH +
Sbjct: 83 KGIVEDIHCGSMKGTGMRPPHPGMGPPQSPMDQ-HSQGYMSPHPSPLGA----PEHVSSP 137
Query: 1526 SQGSVPYPHHHHPHL---------QHLPQP--------PLGLHQPPVRAD---WKLTSSA 1565
G P P P Q + QP P+ LHQ +RA +K+ +
Sbjct: 138 MSGGGPTPPQMPPSQPGALIPGDPQAMSQPNRGPSPFSPVQLHQ--LRAQILAYKMLARG 195
Query: 1566 EDEVETTYSRFQDLIRELSHRDQSETRELAEMPPPQSRLLQYRQVQSRSPPAVPSPPSST 1625
+ ET Q R L Q + ++ + Q + Q +Q Q + P P +
Sbjct: 196 QPLPETLQLAVQGK-RTLPGLQQQQQQQQQQQQQQQQQQQQQQQPQQQPP----QPQTQQ 250
Query: 1626 DHSSHFSNFNDNSRDIEVASNPAFPQRLPPQIFNSPFSLPSEHLAPPPLKYLAPDGAWTF 1685
N+N S S P+ PQ+LP +P PS PP P A
Sbjct: 251 QQQPALVNYNRPSGPGPELSGPSTPQKLP---VPAPGGRPS---PAPPAAAQPPAAA--- 301
Query: 1686 ANLQQNHLMGPGFPYGLPPLPHRPPQNPFVQIQNHQHAI 1724
+ GP P P P +P +P +Q+Q Q I
Sbjct: 302 -------VPGPSVP---QPAPGQP--SPVLQLQQKQSRI 328
Score = 33.1 bits (74), Expect = 2.7
Identities = 47/177 (26%), Positives = 64/177 (36%), Gaps = 25/177 (14%)
Query: 1388 PEQPNQIPPQPNQVVQQQSQLNQQPQQPPPQLSPAYQAGPNNAFFNSAVAHRPQSPPAE- 1446
P P PPQ + Q SQ P P P +P + + P + PQ PP++
Sbjct: 101 PPHPGMGPPQ--SPMDQHSQGYMSPH-PSPLGAPEHVSSP----MSGGGPTPPQMPPSQP 153
Query: 1447 -AVIPEQQPPPMLQEGHSPLRAIAQPGPILPSHLNSFIDENPS------GLPIGEALD-R 1498
A+IP P M Q P P P L+ + + G P+ E L
Sbjct: 154 GALIPGD-PQAMSQPNRGP-------SPFSPVQLHQLRAQILAYKMLARGQPLPETLQLA 205
Query: 1499 IHGSVALETLRQQQARFQQWSEHHAFLSQGSV-PYPHHHHPHLQHLPQPPLGLHQPP 1554
+ G L L+QQQ + QQ + Q P P Q QP L + P
Sbjct: 206 VQGKRTLPGLQQQQQQQQQQQQQQQQQQQQQQQPQQQPPQPQTQQQQQPALVNYNRP 262
>gi|93141033 PAX interacting protein 1 [Homo sapiens]
Length = 1069
Score = 56.2 bits (134), Expect = 3e-07
Identities = 56/192 (29%), Positives = 80/192 (41%), Gaps = 23/192 (11%)
Query: 1303 EPKQVDLESNPQNRSPESRPSVVYPSTKFPRKDNLNPRHINLPLPAPHAQYAIPNRHFHP 1362
+P+Q+ Q + +P P F ++ + P Q P + HP
Sbjct: 420 QPQQIMQLQQQQQQQISQQPYPQQPPHPFSQQQQQQQQAH--PHQFSQQQLQFPQQQLHP 477
Query: 1363 LPQLPRPPF---PIPQQHTLLNQ----QQNNLPEQP-NQIPPQPNQVVQQQSQLNQQPQ- 1413
QL RP P QQH L Q QQ+ L +Q Q+ Q + + QQQ Q QQ Q
Sbjct: 478 PQQLHRPQQQLQPFQQQHALQQQFHQLQQHQLQQQQLAQLQQQHSLLQQQQQQQIQQQQL 537
Query: 1414 ----QPPPQLSPAYQAGPNNAFFNSAVAHR--PQSPPAEAVIPEQQPPPMLQE----GHS 1463
Q Q Q P+ + + A+ H+ PQ PP + +QQPPP Q+ GH
Sbjct: 538 QRMHQQQQQQQMQSQTAPHLSQTSQALQHQVPPQQPPQQQ--QQQQPPPSPQQHQLFGHD 595
Query: 1464 PLRAIAQPGPIL 1475
P I + G +L
Sbjct: 596 PAVEIPEEGFLL 607
Score = 44.3 bits (103), Expect = 0.001
Identities = 58/204 (28%), Positives = 79/204 (38%), Gaps = 46/204 (22%)
Query: 1374 PQQHTLLNQQQNNLPEQPNQIPP-QPNQVV----QQQSQLNQQ--PQQPP----PQLSPA 1422
P+ H L QQQ +Q + + QP Q++ QQQ Q++QQ PQQPP Q
Sbjct: 396 PETHMLQQQQQAQQQQQQHPVLHLQPQQIMQLQQQQQQQISQQPYPQQPPHPFSQQQQQQ 455
Query: 1423 YQAGPNNAFFNSAVAHRPQS---PPAEAVIPEQQPPPMLQEGHSPLRAIAQPGPILPSH- 1478
QA P+ F+ PQ PP + P+QQ P Q+ A+ Q L H
Sbjct: 456 QQAHPHQ--FSQQQLQFPQQQLHPPQQLHRPQQQLQPFQQQ-----HALQQQFHQLQQHQ 508
Query: 1479 -----------LNSFIDENPSGLPIGEALDRIHGSVALETLRQQQARFQQWSEHHAFLSQ 1527
+S + + + L R+H QQQ + Q S+ LSQ
Sbjct: 509 LQQQQLAQLQQQHSLLQQQQQQQIQQQQLQRMH---------QQQQQQQMQSQTAPHLSQ 559
Query: 1528 GSVPYPH----HHHPHLQHLPQPP 1547
S H P Q QPP
Sbjct: 560 TSQALQHQVPPQQPPQQQQQQQPP 583
Score = 35.8 bits (81), Expect = 0.42
Identities = 89/416 (21%), Positives = 143/416 (34%), Gaps = 73/416 (17%)
Query: 1255 HHPPVTIGQPQNQHQEKDQHEQNRNGKSDTNNSGPEINKIRTPEKKPTEPKQVDLESNPQ 1314
+HP + I + + +E+++ E+ N + D+ N G T EK Q S Q
Sbjct: 181 YHPRLIIYE--EEEEEEEEEEEVENEEQDSQNEGS------TDEKSSPASSQEGSPSGDQ 232
Query: 1315 NRSPESRPSVVYPSTKFPRKDNLNP----RHINLPLPAPHAQYAIPNRHFHPLPQLPRPP 1370
SP+S F + +P R++N PA Q A R LPQ P
Sbjct: 233 QFSPKSNTEKSKGELMFDDSSDSSPEKQERNLNWT-PAEVPQLAAAKRR---LPQGKEPG 288
Query: 1371 FPIPQQHTLLNQQQNNLPEQPNQIPPQP--NQVVQQQSQLNQQPQQPPPQLSPAYQAG-- 1426
L+N N P N +PP+ N + Q+ + + + SPA +
Sbjct: 289 --------LINLCANVPPVPGNILPPEVRGNLMAAGQNLQSSERSEMIATWSPAVRTLRN 340
Query: 1427 -PNNAFFN-----SAVAHRPQSPPAEAVIPEQQPPPMLQEGHSPLRAIA----------- 1469
NNA S VAH Q+ A EQQ Q+GH+ A+
Sbjct: 341 ITNNADIQQMNRPSNVAHILQTLSAPTKNLEQQVNHS-QQGHTNANAVLFSQVKVTPETH 399
Query: 1470 ------------QPGPIL---PSHLNSFIDENPSGLPIGEALDRIHGSVALETLRQQQAR 1514
Q P+L P + + + + + QQQ +
Sbjct: 400 MLQQQQQAQQQQQQHPVLHLQPQQIMQLQQQQQQQIS-----QQPYPQQPPHPFSQQQQQ 454
Query: 1515 FQQWSEHHAFLSQGSVPYPHHHHPHLQHLPQPPLGLHQPPVRADWKLTSSAEDEV---ET 1571
QQ H Q P H P H PQ L Q + + ++ +
Sbjct: 455 QQQAHPHQFSQQQLQFPQQQLHPPQQLHRPQQQLQPFQQQHALQQQFHQLQQHQLQQQQL 514
Query: 1572 TYSRFQDLIRELSHRDQSETRELAEMPPPQSRLLQYRQVQSRSPPAVPSPPSSTDH 1627
+ Q + + + Q + ++L M Q Q +Q+QS++ P + + H
Sbjct: 515 AQLQQQHSLLQQQQQQQIQQQQLQRMHQQQ----QQQQMQSQTAPHLSQTSQALQH 566
>gi|151301053 RNA binding motif protein 33 [Homo sapiens]
Length = 1170
Score = 56.2 bits (134), Expect = 3e-07
Identities = 86/354 (24%), Positives = 119/354 (33%), Gaps = 50/354 (14%)
Query: 1146 IVQPNPSVLIGNPIRAYTPPPPLGPH-------PNLGKSPSPVQRIDPHTGTSILYVPAV 1198
+ QP P + + P PP G H P + +P PV P +++
Sbjct: 335 LFQPQPLQPLLPVQHPHHPSPPQGMHMPPQLETPRMMMTPPPVTPQQPKN----IHINPH 390
Query: 1199 YGGNVVMSVPLPVPWTGYQGRFAVDPRIITHQAAMAYNMNLLQTHGRGSPIPYGLGHHPP 1258
+ G VV V +P+ Q R AV P+ + T G P+P P
Sbjct: 391 FKGTVVTPVQVPLLPVPSQPRPAVGPQRFPGPPEFPQH-----TPG---PVPNSFSQPPR 442
Query: 1259 VTIGQPQNQHQEKDQHEQNRNGKSDTNNSGPEINKIRTPEKKPTEPKQVDLESNP---QN 1315
+ + + G S + + P P + S+P Q+
Sbjct: 443 LPLQDQWRAPPPPQDRDPFFLGVSGEPRFPSHLFLEQRSPPPPPPPPTLLNSSHPVPTQS 502
Query: 1316 RSPESRPSVVY----PSTKFPRKDNLNPRHINLPLPAPHAQYAIPN----RHFHP--LPQ 1365
P ++P + FPR+ + P + P P ++ P R F P P
Sbjct: 503 PLPFTQPGPAFNQQGQQPVFPRERPVRPA-LQPPGPVGILHFSQPGSATTRPFIPPRQPF 561
Query: 1366 LPRPPFPIPQQHTLLNQQQNNLPEQPNQIPPQPNQVVQQQSQLNQQPQQPPPQLSPAYQA 1425
LP P P HT N Q P P PQP Q QQ +Q P QPP Q P +Q
Sbjct: 562 LPGPGQPFLPTHTQPNLQGPLHPPLPPPHQPQPQQPQQQPPPQHQPPHQPPHQPPPQHQP 621
Query: 1426 GPNNAFFNSAVAHRPQSPPA--------EAVIPEQQPPPMLQEGHSPLRAIAQP 1471
P H PQ PP +P PM Q P AQP
Sbjct: 622 PPQ---------HPPQHPPQHQHHHHHHHLSVPPPPLMPMSQPQFRPHVQTAQP 666
Score = 51.6 bits (122), Expect = 7e-06
Identities = 111/514 (21%), Positives = 177/514 (34%), Gaps = 71/514 (13%)
Query: 1438 HRPQSPPAEA-VIPEQQPPPMLQEGHSPLRAIAQPGPILP----SHLNSFIDENPSGLPI 1492
HRP P + V+P+ PPP P+R++ QP P+ P H + P G+ +
Sbjct: 304 HRPALLPTQPPVVPQAPPPPPPPPQQQPIRSLFQPQPLQPLLPVQHPHH--PSPPQGMHM 361
Query: 1493 GEALDRIHGSVALETLRQQQARFQQWSEHHAFLSQGSV---------PYPHHHHPHL--- 1540
L+ + + QQ + + H +G+V P P P +
Sbjct: 362 PPQLETPRMMMTPPPVTPQQPKNIHINPHF----KGTVVTPVQVPLLPVPSQPRPAVGPQ 417
Query: 1541 ---------QHLPQP-PLGLHQPP---VRADWKLTSSAEDEVETTYSRFQDLIRELSHRD 1587
QH P P P QPP ++ W+ +D + + R SH
Sbjct: 418 RFPGPPEFPQHTPGPVPNSFSQPPRLPLQDQWRAPPPPQDR-DPFFLGVSGEPRFPSHLF 476
Query: 1588 QSETRELAEMPPPQSRLLQYRQVQSRSPPAVPSPPSSTDHSSHFSNFNDNSRDIEVASNP 1647
E R PPP + L V ++SP P + + F R + A P
Sbjct: 477 L-EQRSPPPPPPPPTLLNSSHPVPTQSPLPFTQPGPAFNQQGQQPVF-PRERPVRPALQP 534
Query: 1648 AFPQRLPPQIFNSPFSLPSEHLAPPPLKYLAPDGAWTFANLQQNHLMGPGFPYGLPPLPH 1707
P + F+ P S + PP +L G Q +L GP P LPP PH
Sbjct: 535 PGPVGILH--FSQPGSATTRPFIPPRQPFLPGPGQPFLPTHTQPNLQGPLHP-PLPP-PH 590
Query: 1708 RP-PQNPFVQIQNHQHAIGQEPFHPLSSRTVSSSSLPSLEEYEPRGPGRPLYQRRISSSS 1766
+P PQ P Q Q P P ++ P+ P + + S
Sbjct: 591 QPQPQQPQQQPPPQHQPPHQPPHQPPPQHQPP-------PQHPPQHPPQHQHHHHHHHLS 643
Query: 1767 VQPCSEEVSTPQDSLAQCKELQDHSNQSSFNFSSPESWVNTTSSTPYQNIPCNGSSRTAQ 1826
V P + + Q ++ S + + T+S QN+ S R Q
Sbjct: 644 VPPPPLMPMSQPQFRPHVQTAQPQASSSRMQCPQRQGLRHNTTS---QNV----SKRPMQ 696
Query: 1827 PRELIAPPKTVKPPEDQLKSENLEVSSSFNYSVLQHLGQFPPLMPNKQIAESANSSSPQS 1886
+ AP + S +E+SSS + P+ Q+ ++S P
Sbjct: 697 QMQPTAPRNSNLRELPIAPSHVIEMSSSRCSAT-----------PSAQVKPIVSASPPSR 745
Query: 1887 SAGGKPAMSYASALRAPPKP--RPPPEQAKKSSD 1918
+ G + + ++ P P E+AK ++
Sbjct: 746 AVAGSRSSQGKTEVKVKPASPVAQPKEEAKTETE 779
Score = 49.3 bits (116), Expect = 4e-05
Identities = 93/411 (22%), Positives = 131/411 (31%), Gaps = 89/411 (21%)
Query: 1288 GPEINKIRTPEKKPTEPKQVDLESNPQNRSPESRPSVVYPSTKFPRKDNLNPRHINLPLP 1347
GP N P + P + Q PQ+R P V +FP L R P P
Sbjct: 431 GPVPNSFSQPPRLPLQD-QWRAPPPPQDRDPFFLG--VSGEPRFPSHLFLEQRSPPPPPP 487
Query: 1348 APHAQYAIPNRHFHPLPQLPRPPFPIPQQHTLLNQQ------QNNLPEQPNQIPPQPNQV 1401
P + HP+P + P P Q NQQ P +P PP P +
Sbjct: 488 PPTLLNSS-----HPVPT--QSPLPFTQPGPAFNQQGQQPVFPRERPVRPALQPPGPVGI 540
Query: 1402 VQ--QQSQLNQQPQQPPPQLSPAYQAGPNNAFFNSAVA-------HRPQSPP--AEAVIP 1450
+ Q +P PP Q + GP F + H P PP + P
Sbjct: 541 LHFSQPGSATTRPFIPPRQ---PFLPGPGQPFLPTHTQPNLQGPLHPPLPPPHQPQPQQP 597
Query: 1451 EQQPPPMLQEGHSPLRAIAQPGPILPSHLNSFIDENPSGLPIGEALDRIHGSVALETLRQ 1510
+QQPPP Q H P QP P Q
Sbjct: 598 QQQPPPQHQPPHQPPH---QPPP------------------------------------Q 618
Query: 1511 QQARFQQWSEHHAFLSQGSVPYPHHHHPHLQHLPQPPLGLHQPPVR-----ADWKLTSSA 1565
Q Q +H HHHH HL P P + + QP R A + +SS
Sbjct: 619 HQPPPQHPPQHPPQHQH------HHHHHHLSVPPPPLMPMSQPQFRPHVQTAQPQASSSR 672
Query: 1566 EDEVETTYSRFQDLIRELSHRDQSETR-------ELAEMPPPQSRLLQYRQVQSRSPPAV 1618
+ R + +S R + + L E+P S +++ + + P+
Sbjct: 673 MQCPQRQGLRHNTTSQNVSKRPMQQMQPTAPRNSNLRELPIAPSHVIEMSSSRCSATPSA 732
Query: 1619 PSPP--SSTDHSSHFSNFNDNSRDIEVASNPAFPQRLPPQIFNSPFSLPSE 1667
P S++ S + + EV PA P P + + P E
Sbjct: 733 QVKPIVSASPPSRAVAGSRSSQGKTEVKVKPASPVAQPKEEAKTETEFPDE 783
Score = 46.2 bits (108), Expect = 3e-04
Identities = 145/648 (22%), Positives = 205/648 (31%), Gaps = 121/648 (18%)
Query: 1293 KIRTPEKKPTEPKQVDLESNPQNRSPESRPSVVYPSTKFPRKDNLNPRHINLPLPAPHAQ 1352
K P PT+P V P++ P P + P + P+ + LP H
Sbjct: 302 KDHRPALLPTQPPVV----------PQAPPPPPPPPQQQPIRSLFQPQPLQPLLPVQHPH 351
Query: 1353 YAIPNRHFHPLPQLPRPPFPIPQQHTLLNQQQNNLPEQPNQIPPQPN----QVVQQQSQL 1408
+ P + H PQL P ++ P+QP I P+ V Q L
Sbjct: 352 HPSPPQGMHMPPQLETP--------RMMMTPPPVTPQQPKNIHINPHFKGTVVTPVQVPL 403
Query: 1409 NQQPQQPPPQLSPAYQAGPNN--AFFNSAVAHRPQSPPAEAVIPEQQPPPMLQEGHSPLR 1466
P QP P + P GP V + PP + + + PP Q+ P
Sbjct: 404 LPVPSQPRPAVGPQRFPGPPEFPQHTPGPVPNSFSQPPRLPLQDQWRAPPPPQD-RDPFF 462
Query: 1467 AIAQPGPILPSHLNSFIDEN--PSGLPIGEALDRIHGSVALETLRQQQARFQQWSEHHAF 1524
P PSHL F+++ P P L+ H Q F Q AF
Sbjct: 463 LGVSGEPRFPSHL--FLEQRSPPPPPPPPTLLNSSH-----PVPTQSPLPFTQ--PGPAF 513
Query: 1525 LSQGSVP-YPHHH--HPHLQHLPQPPLGLHQPPVRADWKLTSSAEDEVETTYSRFQDLIR 1581
QG P +P P LQ P P+G+ L S T
Sbjct: 514 NQQGQQPVFPRERPVRPALQ--PPGPVGI----------LHFSQPGSATT---------- 551
Query: 1582 ELSHRDQSETRELAEMPPPQSRLLQYRQVQSRSPPAVPSPPSSTDHSSHFSNFNDNSRDI 1641
R R+ P Q L + Q + P P PP
Sbjct: 552 ----RPFIPPRQPFLPGPGQPFLPTHTQPNLQGPLHPPLPPPH----------------- 590
Query: 1642 EVASNPAFPQRLPPQIFNSPFSLPSEHLAPPPLKYLAPDGAWTFANLQQNHLMGPGFPYG 1701
P PQ+ PP P P + PPP P Q+H
Sbjct: 591 --QPQPQQPQQQPPPQHQPPHQPPHQ---PPPQHQPPPQHPPQHPPQHQHHHHHHHLSVP 645
Query: 1702 LPPL-PHRPPQ-NPFVQIQNHQHAIG-------QEPFHPLSSRTVSSSSLPSLEEYEPRG 1752
PPL P PQ P VQ Q + Q H +S+ VS + ++ PR
Sbjct: 646 PPPLMPMSQPQFRPHVQTAQPQASSSRMQCPQRQGLRHNTTSQNVSKRPMQQMQPTAPRN 705
Query: 1753 PG---RPLYQRRISSSSVQPCSEEVSTPQDSLAQCKELQDHSNQSSFNFSSPESWVNTTS 1809
P+ + S CS +TP AQ K + S S + + S
Sbjct: 706 SNLRELPIAPSHVIEMSSSRCS---ATPS---AQVKPIVSASPPS-------RAVAGSRS 752
Query: 1810 STPYQNIPCNGSSRTAQPRELIAPPKTVKPPEDQLKSENLEVSSSFNYSVLQHLGQFPPL 1869
S + +S AQP+E A +T P ED E + + + + +
Sbjct: 753 SQGKTEVKVKPASPVAQPKE-EAKTETEFPDED-------EETRLYRLKIEEQKRLREEI 804
Query: 1870 MPNKQIAESANSSSPQSSAGGKPAMSYASALRAPPKPRPPPEQAKKSS 1917
+ K++ + + + + A L APP P EQA S
Sbjct: 805 LKQKELRRQQQAGARKKELLERLAQQ-QQQLYAPPPPAEQEEQALSPS 851
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapiens]
Length = 1124
Score = 55.1 bits (131), Expect = 7e-07
Identities = 47/176 (26%), Positives = 68/176 (38%), Gaps = 16/176 (9%)
Query: 1318 PESRPSVVYPSTKFPRKDNLNPRHINLPLPAPHAQYAIP----NRHFHPLPQLP-RPPF- 1371
P++ P + P + P +P L P+P A A+ F P P P + PF
Sbjct: 619 PQAPPXLALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFS 678
Query: 1372 -----PIPQQHTLLNQQQNNLPEQPNQIPPQPNQVVQQQSQLNQQPQQPPPQLSPAYQAG 1426
P+ T +Q +L P Q+PP P PQ PPP +P Q
Sbjct: 679 PPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVP 738
Query: 1427 PN---NAFFNSAVAHRPQSPPAEAVIPEQQPPPMLQEGHSPLRAIAQPGPILPSHL 1479
P+ + + + P+ PP A P Q PP P+ +A+P P P L
Sbjct: 739 PSPPASPPMSPSATPPPRVPPLLAAPPLQVPPS--PPASLPMSPLAKPPPQAPPAL 792
Score = 52.8 bits (125), Expect = 3e-06
Identities = 176/728 (24%), Positives = 235/728 (32%), Gaps = 130/728 (17%)
Query: 1282 SDTNNSGPEINKIRTPEKKPTEPKQVDLESNPQNRSPESRPSVVYPSTKFPRKDN---LN 1338
S SGP P++PK L++ RP V P PRKD L
Sbjct: 250 SSPARSGPSARGTPRAPAHPSQPKPKGLQA--------LRPPQVTP----PRKDAAPALG 297
Query: 1339 PRHIN-LPLPAPHAQYAIP----NRHFHPLPQLPRPPFPIPQQHTLLNQQQNNLPEQPNQ 1393
P + L P+P A P + PLP P P+ L P P
Sbjct: 298 PLSSSPLATPSPSGTKARPVPPPDNAATPLPATLPPSPPLATPLPLAPPS----PSAPPS 353
Query: 1394 IPPQPNQVVQQQSQLNQQPQQPPPQLSPAYQAGPNNAFFNSAVAHRPQSPPAEAVIPEQQ 1453
+ P+ SQ PP Q P+ Q P +S + Q+PP+ + Q
Sbjct: 354 LQTLPSPPATPPSQAPPSMTTPPMQAPPSLQTIPPIQVPHSLTSPSLQAPPSPLALSSLQ 413
Query: 1454 P-----PPMLQEGH---------------SPLRAIAQP-------GPI-LPSHLNSFIDE 1485
P LQ H SP R + P P+ LP+
Sbjct: 414 ATTSLGSPTLQATHSFLTMSPRQTQASLTSPSRPASTPPDSPPLQAPLSLPASPPLQTSL 473
Query: 1486 NPSGLPIGEALDRIHGSVALETLRQQQARFQQWSEHHAFLSQGSVPYPHHHHPHLQHLPQ 1545
+P+ P+ L IH AL +L + S L S P P LQ
Sbjct: 474 SPAVSPLSSPL-TIHPLQALSSLASHSPQAPLSSLIMPPLETQSSLAP----PSLQ---T 525
Query: 1546 PPLGLHQPPVRADWKLTSSAEDEVETTYSRFQDLIRELSHRDQSETRELAEMP---PPQS 1602
PP L PP+ L S A ++T + E + P PP
Sbjct: 526 PPASLTTPPLE---NLPSLAPPPLQTASAPLTTPHLETPPCPAPCPLQAPPSPLTTPPPE 582
Query: 1603 RLLQYRQVQSRSPPAVPSPPSSTDHSSHFSNFNDNSRDIEVASNPAFPQRLPPQIFNSPF 1662
++PPA+ SPP S S + P P + PP + P
Sbjct: 583 TPSSIATPPPQAPPALASPPLQGLPSPPLSPL----------ATP--PPQAPPXLALPPL 630
Query: 1663 SLPSEHLAPPPLKYLAPDGAWTFANLQQNHLMGPGFPYGLPPL--PHRPPQNPFVQIQNH 1720
P A PPL LA L + L P P PP+ P PP +P V
Sbjct: 631 QAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSAT 690
Query: 1721 QHAIG---------QEPFHPLSSRTVSSSSLPSLEEYEPRGPGRPLYQRRISSSSVQPCS 1771
+ Q P P +S +S S+ P + P P Q S + P S
Sbjct: 691 PPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPL--AAPPLQVPPSPPASPPMS 748
Query: 1772 EEVSTPQ--DSLAQCKELQ-DHSNQSSFNFS----SPESWVNTTSSTPYQNIPCNGSSRT 1824
+ P L LQ S +S S P ++ P Q +P +S
Sbjct: 749 PSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPALATPPLQALPSPPASFP 808
Query: 1825 AQ---------PRELIAPPKTVKPPEDQLKSENLEVSSSFNYSVLQHLGQFPPLMPNKQI 1875
Q P +A P PP L + L+V S PP P Q
Sbjct: 809 GQAPFSPSASLPMSPLATPPPQAPP--VLAAPLLQVPPS------------PPASPTLQA 854
Query: 1876 AESANSSSPQSSAGGKPAMSYASALRAPPKP-RPP------PEQAKKSSDPLSLFQELSL 1928
+ P +S G P ++ A A PP P R P P+ A SS S +EL
Sbjct: 855 PRRPPTPGPDTSVSG-PRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELR- 912
Query: 1929 GSSSGSNG 1936
G SG G
Sbjct: 913 GYDSGPEG 920
>gi|187829452 autism susceptibility candidate 2 isoform 2 [Homo
sapiens]
Length = 1235
Score = 54.3 bits (129), Expect = 1e-06
Identities = 112/486 (23%), Positives = 152/486 (31%), Gaps = 90/486 (18%)
Query: 1258 PVTIGQPQNQHQEKDQHEQNRNGKSDTN------NSGPEINKIRTPEKK-----PTEPKQ 1306
P ++G + DQ E+ + S+ N PE+ PE P PK
Sbjct: 212 PSSLGTGYFCDSDSDQEEKASDASSEKLFNTVIVNKDPELGVGTLPEHDSQDAGPIVPKI 271
Query: 1307 VDLESNPQNRSPESRPSVVYPSTKFPRKDNLNPRHINLPLPAPHAQYAIPNRHFHPLPQL 1366
LE + + + + P + L P P IP P +
Sbjct: 272 SGLERSQEKSQDCCKEPIFEP--------------VVLKDPCPQVAQPIPQPQTEPQLRA 317
Query: 1367 PRPPFPIPQQHTLLNQQQNNLPEQPNQIPPQPNQVVQQQSQLNQQPQQPPPQLSPAYQAG 1426
P P P Q T Q L QP Q PP+ Q Q Q Q+PP SP
Sbjct: 318 PSPD-PDLVQRTEAPPQPPPLSTQPPQGPPE----AQLQPAPQPQVQRPPRPQSPTQLLH 372
Query: 1427 PNNAFFNSAVAHRPQSPPAEAVIPEQQPPPMLQEGHSPLRAIAQPGPILPSHLNSFIDEN 1486
N + + + S P A L S A QP P SH +
Sbjct: 373 QNLPPVQAHPSAQSLSQPLSAYNSSSLSLNSLSSSRSSTPAKTQPAPPHISH-------H 425
Query: 1487 PSGLPIGEALDRIHGSVALETLRQQQARFQQWSEHHAFLSQGSVPYPHHHHPHLQHLPQP 1546
PS P +L S H+F P H HHP++ P
Sbjct: 426 PSASPFPLSLPN-------------------HSPLHSFTPTLQPP-AHSHHPNMF---AP 462
Query: 1547 PLGLHQPPVRADWKLTSSAEDEVETTYSRFQDLIRELSHRDQSETRELAEMPPPQSRLLQ 1606
P L PP L A +TYS QD++R+ + TR LA
Sbjct: 463 PTALPPPPPLTSGSL-QVAGHPAGSTYSE-QDILRQ-----ELNTRFLAS---------- 505
Query: 1607 YRQVQSRSPPAVPSPPSSTDHSSHFSNFNDNSRDIEVASNPAFPQRLPPQIFNSPFSLPS 1666
Q R P P T+ H + + FP +PP +P+
Sbjct: 506 --QSADRGASLGPPPYLRTEFHQHQHQHQHTHQHTHQHTFTPFPHAIPPTAI-----MPT 558
Query: 1667 EHLAPPPLKYLAPDGAWTFANLQQNHLMGPGFPYGLPPLPHRPPQNPFVQIQNHQHAIGQ 1726
PP+ P F H P G+PP+ PP PF +Q
Sbjct: 559 P---APPMFDKYPTKVDPFYRHSLFHSYPPAVS-GIPPMI--PPTGPFGSLQGAFQPKLT 612
Query: 1727 EPFHPL 1732
+PF P+
Sbjct: 613 DPFRPM 618
>gi|32307128 nuclear receptor coactivator 6 [Homo sapiens]
Length = 2063
Score = 53.1 bits (126), Expect = 3e-06
Identities = 90/343 (26%), Positives = 130/343 (37%), Gaps = 60/343 (17%)
Query: 1200 GGNVVMSVPLPVPWTGYQGRFAVDPRIITHQAAMAYNMNLL----QTHGRGSPIPYGLGH 1255
GGNV S+ P P Q R PR + AM ++ L Q+H GS P H
Sbjct: 187 GGNVSSSMMAPGPNPELQPR---TPRPASQSDAMDPLLSGLHIQQQSHPSGSLAP---PH 240
Query: 1256 HP--PVTIGQ-------PQNQHQEKDQHEQNRNGKSDTNNSGPEINKIRTPEKKPTEPKQ 1306
HP PV++ + PQ Q Q++ Q +Q + + + + R P++ + Q
Sbjct: 241 HPMQPVSVNRQMNPANFPQLQQQQQQQQQQQQQQQQQQQQQQQQQLQARPPQQHQQQQPQ 300
Query: 1307 VDLESNPQNRSPESRPSVV----YPSTKF---PRKDNLNPRHIN-----LPLPAPHAQY- 1353
PQ +P P PS P + +L N PLP P Q
Sbjct: 301 ---GIRPQFTAPTQVPVPPGWNQLPSGALQPPPAQGSLGTMTANQGWKKAPLPGPMQQQL 357
Query: 1354 -AIPNRHFHPLPQLPRPPFPIPQQHTLLNQQQNNLPEQPNQ---IPPQPNQVVQQQSQLN 1409
A P+ P P PP+P Q +Q N P+ N PQ + S++
Sbjct: 358 QARPSLATVQTPSHPPPPYPFGSQQA--SQAHTNFPQMSNPGQFTAPQMKSLQGGPSRVP 415
Query: 1410 QQPQQP-----PPQLSP-AYQAG--PNNAFFNSAVAHRPQSPPAEAVIPE--QQP----- 1454
QQP P SP ++Q G ++ N PP +P+ QQP
Sbjct: 416 TPLQQPHLTNKSPASSPSSFQQGSPASSPTVNQTQQQMGPRPPQNNPLPQGFQQPVSSPG 475
Query: 1455 -PPMLQEGHSPLRAIA---QPGPILPSHLNSFIDENPSGLPIG 1493
PM+Q+G+ P + QP P L+ + P LP G
Sbjct: 476 RNPMVQQGNVPPNFMVMQQQPPNQGPQSLHPGLGGMPKRLPPG 518
Score = 49.3 bits (116), Expect = 4e-05
Identities = 190/831 (22%), Positives = 275/831 (33%), Gaps = 193/831 (23%)
Query: 1145 GIVQPNPSVLIGNPIRAYTPPPPLGPHPNLGKSPSPVQRIDPHTGTSILYVPAVYGGNVV 1204
G V +PS ++G + PP GP P++ + Q DP T N
Sbjct: 771 GPVNNSPSQVMGIQGQVLRPP---GPSPHMAQ-----QHGDPATTA-----------NND 811
Query: 1205 MSVPLPVPWTGYQGRFAVDPRIITHQAAMAYNMNLLQTHGRGSPIPY-GLGHHPPVTIGQ 1263
+S+ +P Q V P + Q A N HG P+ G + ++ GQ
Sbjct: 812 VSLSQMMPDVSIQQTNMVPPHVQAMQGNSASG-NHFSGHGMSFNAPFSGAPNGNQMSCGQ 870
Query: 1264 PQNQHQEKDQ-----------HEQNRNGKSDTNNSGPEINKIRTPEKKPTEPKQVDLESN 1312
KD G NN N + +KKP K+ S
Sbjct: 871 NPGFPVNKDVTLTSPLLVNLLQSDISAGHFGVNNKQNNTNANKPKKKKPPRKKK---NSQ 927
Query: 1313 PQNRSPESRPSVVYPSTKFPRKDNLNPRHINLPLPAPHAQYAIPNRHFHPLPQLPRPPFP 1372
+P++RP+ + + + P + INL P LP+ P
Sbjct: 928 QDLNTPDTRPAGLEEADQPPLPGE---QGINLDNSGPK------------LPEFSNRPPG 972
Query: 1373 IPQQHTLLNQQQNNLPEQPNQI------PPQPNQVVQQQSQLNQQPQQPPPQLSP---AY 1423
P Q +Q L + P Q+ PPQP Q Q Q QL QQ QQPPP P
Sbjct: 973 YPSQPV----EQRPLQQMPPQLMQHVAPPPQPPQQ-QPQPQLPQQ-QQPPPPSQPQSQQQ 1026
Query: 1424 QAGPNNAFFNSAVAHRPQS----------PPAEAVIPEQQPPPMLQEGHSPLRAIAQ-PG 1472
Q + P+S PP + P+ Q PM Q G P+ Q P
Sbjct: 1027 QQQQQQMMMMLMMQQDPKSVRLPVSQNVHPPRGPLNPDSQRMPMQQSGSVPVMVSLQGPA 1086
Query: 1473 PILPSHLNSFIDENPSGLPIGEALDRIHGSVALETLRQQQARFQQWSEHHAFLSQGSVPY 1532
+ PS D+ +P+ L GS + + + Q+ Q S+P
Sbjct: 1087 SVPPSP-----DKQRMPMPVNTPL----GSNSRKMVYQES---PQNPSSSPLAEMASLP- 1133
Query: 1533 PHHHHPHLQHLPQPPLGLHQPPVRADWKLTSSAEDEVETTYSRFQDLIRELSHRDQSETR 1592
P P G + P SH + +
Sbjct: 1134 ----EASGSEAPSVPGGPNNMP-----------------------------SHVVLPQNQ 1160
Query: 1593 ELAEMPPPQSRLLQYRQVQSRSPPAVPSPPSSTDHSSHFSNFNDNSRDIEVASNPAFPQR 1652
+ P P L Q + P V S PSS H HF N ++ S P P R
Sbjct: 1161 LMMTGPKPGPSPLSATQGATPQQPPVNSLPSS--HGHHFPNVAAPTQ----TSRPKTPNR 1214
Query: 1653 LPPQIFNSPFSLPSEHLAPPPLK----YLAPDGAWTFANLQQNHLMGPGFPYGLP-PLPH 1707
P+ P+ + + PP + L+P+ + N + FP + PLP
Sbjct: 1215 ASPR----PYYPQTPNNRPPSTEPSEISLSPE--------RLNASIAGLFPPQINIPLPP 1262
Query: 1708 RPPQNPFVQIQNHQ----HAIGQEP----FHPLSSRTVSSSSLPSLEEYEPRGPGRPLYQ 1759
RP N Q AIGQ P +P + T + L S+ + +
Sbjct: 1263 RPNLNRGFDQQGLNPTTLKAIGQAPSNLTMNPSNFATPQTHKLDSVVVNSGKQSNSGATK 1322
Query: 1760 RRISSSS--VQPCSEEVSTP----QDSLAQCKELQDHSNQSSF-NFSSPESWVNTTSSTP 1812
R S+S P S +TP Q+S A L +N + N P + + S TP
Sbjct: 1323 RASPSNSRRSSPGSSRKTTPSPGRQNSKAPKLTLASQTNAALLQNVELPRNVL--VSPTP 1380
Query: 1813 YQNIPCNGSSRTAQPRELIAPPKTVKPPEDQLKSENLEVSSSFNYSVLQHLGQFPPLMPN 1872
N P GS P L +N VS + V++ N
Sbjct: 1381 LANPPVPGSF----------------PNNSGLNPQNSTVSVAAVGGVVE---------DN 1415
Query: 1873 KQIAESANSSSPQSSAGGKPAMSYASALRAPP----KPRPPPEQAKKSSDP 1919
K+ S Q+S K ++ L+A P K P +Q+KK P
Sbjct: 1416 KESLNVPQDSDCQNSQSRKEQVNI--ELKAVPAQEVKMVVPEDQSKKDGQP 1464
Score = 42.7 bits (99), Expect = 0.003
Identities = 87/385 (22%), Positives = 138/385 (35%), Gaps = 80/385 (20%)
Query: 1256 HPPVTIGQPQNQHQEKDQHEQNRNGKSDTNNSGPEINKIRT-PEKKPTEPKQVDLESNPQ 1314
HPP P Q H + + P++ ++ P + PT +Q L
Sbjct: 371 HPPPPY--PFGSQQASQAHTNFPQMSNPGQFTAPQMKSLQGGPSRVPTPLQQPHLT---- 424
Query: 1315 NRSPESRPSVVYPSTKFPRKDNLNPRHINLPLPAPHAQYAIPNRHFHPLPQLPRPPFPIP 1374
N+SP S PS + + P P + +PLPQ + P P
Sbjct: 425 NKSPASSPSSFQQGSPASSPTVNQTQQQMGPRPPQN----------NPLPQGFQQPVSSP 474
Query: 1375 QQHTLLNQQQNNLPEQPNQIPPQPNQVVQQQSQLNQQPQQ-------PPPQLSPAYQAGP 1427
++ ++ QQ N+P PN +V QQ NQ PQ P +L P + AG
Sbjct: 475 GRNPMV--QQGNVP---------PNFMVMQQQPPNQGPQSLHPGLGGMPKRLPPGFSAGQ 523
Query: 1428 NNAFFNSAVAHRPQSPPAEAVIPEQQPPPMLQEGHSPLRAIAQPGPILPSHLNSFIDENP 1487
N F Q P A P P LQ + A Q P + P
Sbjct: 524 ANPNFMQG-----QVPSTTATTPGNSGAPQLQANQNVQHAGGQGAG--PPQNQMQVSHGP 576
Query: 1488 SGLPIGEALDRIHGSVALETLRQQQARFQQWSEHHAFLSQGSVPYPHHHHPHLQHLPQ-- 1545
+ + +L IHG+ + QQA G+ P + ++Q PQ
Sbjct: 577 PNM-MQPSLMGIHGN-----MNNQQA--------------GTSGVPQVNLSNMQGQPQQG 616
Query: 1546 PP---LGLHQPPVRADWKLTSSAEDEVETTYSRFQDLIRELSHRDQSETRELAEMPPPQS 1602
PP +G+HQ V + ++ + + T + +I LS ++ PP Q+
Sbjct: 617 PPSQLMGMHQQIVPSQGQMV-----QQQGTLNPQNPMI--LSRAQLMPQGQMMVNPPSQN 669
Query: 1603 ------RLLQYRQVQSRSPPAVPSP 1621
R+ +Q+ S+ P + +P
Sbjct: 670 LGPSPQRMTPPKQMLSQQGPQMMAP 694
Score = 42.0 bits (97), Expect = 0.006
Identities = 101/487 (20%), Positives = 163/487 (33%), Gaps = 93/487 (19%)
Query: 1458 LQEGHSPLRAIAQPG-PILPSHLNSFIDENPSGLPIGEALDRIHGSVALETLRQQQARFQ 1516
+Q+ P ++A P P+ P +N + NP+ P L+QQQ + Q
Sbjct: 226 IQQQSHPSGSLAPPHHPMQPVSVNRQM--NPANFP---------------QLQQQQQQQQ 268
Query: 1517 QWSEHHAFLSQGSVPYPHHHHPHLQHLPQPPLGLH-------QPPVRADWKLTSSAEDEV 1569
Q + Q P QH Q P G+ Q PV W S +
Sbjct: 269 QQQQQQQQQQQQQQQQQLQARPPQQHQQQQPQGIRPQFTAPTQVPVPPGWNQLPSGALQP 328
Query: 1570 ETTYSRFQDLIRELSHRDQSETRELAEMPPPQSRLLQYR----QVQSRSPPAVPSPPSST 1625
L ++ + A +P P + LQ R VQ+ S P P P S
Sbjct: 329 PPAQG-------SLGTMTANQGWKKAPLPGPMQQQLQARPSLATVQTPSHPPPPYPFGSQ 381
Query: 1626 DHSSHFSNFNDNSRD-----IEVASNPAFPQRLPPQIFNSPFSLPSEHLAPPPLKYLAPD 1680
S +NF S ++ S P R+P + + S +P + +P
Sbjct: 382 QASQAHTNFPQMSNPGQFTAPQMKSLQGGPSRVPTPLQQPHLTNKSPASSPSSFQQGSPA 441
Query: 1681 GAWTFANLQQNHLMGPGFPYGLPPLPH-------RPPQNPFVQ----------IQNHQHA 1723
+ T QQ MGP P PLP P +NP VQ +Q
Sbjct: 442 SSPTVNQTQQQ--MGPRPPQN-NPLPQGFQQPVSSPGRNPMVQQGNVPPNFMVMQQQPPN 498
Query: 1724 IGQEPFHP----------------LSSRTVSSSSLPSLEEYEPRGPGRPLYQRRISSSSV 1767
G + HP ++ +PS P G P Q ++ +V
Sbjct: 499 QGPQSLHPGLGGMPKRLPPGFSAGQANPNFMQGQVPSTTATTPGNSGAPQLQ---ANQNV 555
Query: 1768 QPCSEEVSTPQDSLAQCKELQDHSNQSSF-----NFSSPESWVNTTSSTPYQNIP-CNGS 1821
Q + + P + Q + Q S N ++ ++ TS P N+ G
Sbjct: 556 QHAGGQGAGPPQNQMQVSHGPPNMMQPSLMGIHGNMNNQQA---GTSGVPQVNLSNMQGQ 612
Query: 1822 SRTAQPRELIAPPKTVKPPEDQLKSE----NLEVSSSFNYSVLQHLGQFPPLMPNKQIAE 1877
+ P +L+ + + P + Q+ + N + + + L GQ P++ +
Sbjct: 613 PQQGPPSQLMGMHQQIVPSQGQMVQQQGTLNPQNPMILSRAQLMPQGQMMVNPPSQNLGP 672
Query: 1878 SANSSSP 1884
S +P
Sbjct: 673 SPQRMTP 679
Score = 38.1 bits (87), Expect = 0.084
Identities = 191/912 (20%), Positives = 292/912 (32%), Gaps = 155/912 (16%)
Query: 1105 PEFIPRALRLQH-------SGSTNKQQQSPPKGKSLHHTQNDHF----QND----GIVQP 1149
P +P L+ H S ++ QQ SP +++ TQ QN+ G QP
Sbjct: 411 PSRVPTPLQQPHLTNKSPASSPSSFQQGSPASSPTVNQTQQQMGPRPPQNNPLPQGFQQP 470
Query: 1150 ------NPSVLIGNPIRAYT----PPPPLGP---HPNLGKSPSPVQRIDPHTGTSILYVP 1196
NP V GN + PP GP HP LG P +R+ P G S
Sbjct: 471 VSSPGRNPMVQQGNVPPNFMVMQQQPPNQGPQSLHPGLGGMP---KRLPP--GFSAGQAN 525
Query: 1197 AVYGGNVVMSVPLPVPWTGYQGRFAVDPRIITHQAAMAYNMNLLQTHGRGSPIPYGLGHH 1256
+ V S P G G + N N+ G+G+ P +
Sbjct: 526 PNFMQGQVPSTTATTP--GNSGA-----------PQLQANQNVQHAGGQGAGPPQ---NQ 569
Query: 1257 PPVTIGQPQNQHQEKDQHEQNRNGKSDTNNSGPEINKIRTPEKKPTEPKQVDLESNPQNR 1316
V+ G P N N + + P++N + + +P + L Q
Sbjct: 570 MQVSHGPPNMMQPSLMGIHGNMNNQQAGTSGVPQVN-LSNMQGQPQQGPPSQLMGMHQQI 628
Query: 1317 SPESRPSVVYPSTKFPRKDNLNPRHINLPLPAPHAQYAI--PNRHFHPLPQLPRPPFP-I 1373
P V T P+ NP ++ P Q + P+++ P PQ PP +
Sbjct: 629 VPSQGQMVQQQGTLNPQ----NPMILSRAQLMPQGQMMVNPPSQNLGPSPQRMTPPKQML 684
Query: 1374 PQQHTLLNQQQNNLPEQPNQIPPQPNQVVQQ---------QSQLNQQPQQPPPQLSPAYQ 1424
QQ + N + Q+ Q N +++Q + Q N Q Q
Sbjct: 685 SQQGPQMMAPHNQMMGPQGQVLLQQNPMIEQIMTNQMQGNKQQFNTQNQSNVMPGPAQIM 744
Query: 1425 AGPNNAFFNSAVAHRPQSPPAEAVIPEQQPPPMLQEGHSPLRAIAQPGPILPSHLNSFID 1484
GP + V Q + ++P+Q P +SP + + G +L S
Sbjct: 745 RGPTPNMQGNMVQFTGQM--SGQMLPQQGPV-----NNSPSQVMGIQGQVLRPPGPSPHM 797
Query: 1485 ENPSGLPIGEALDRIHGSVALETLRQQQARFQQWSEHHAFLSQGSVPYPHHHHPHLQHLP 1544
G P A + + S + + QQ H QG+ +H H
Sbjct: 798 AQQHGDPATTANNDVSLSQMMPDVSIQQTNMVP---PHVQAMQGNSASGNHFSGHGMSFN 854
Query: 1545 QPPLGLHQP-----------PVRADWKLTSSAEDEVETTYSRFQDLIRELSHRDQSETRE 1593
P G PV D LTS L+ L D S
Sbjct: 855 APFSGAPNGNQMSCGQNPGFPVNKDVTLTSP--------------LLVNLLQSDISAGH- 899
Query: 1594 LAEMPPPQSRLLQYRQVQSRSPPAVPSPPSSTDHSSHFSNFNDNS-RDIEVASNPAFPQR 1652
+ + + + P PP +S N D +E A P P
Sbjct: 900 --------FGVNNKQNNTNANKPKKKKPPRKKKNSQQDLNTPDTRPAGLEEADQPPLPGE 951
Query: 1653 LP----------PQIFNSPFSLPSEHLAPPPLKYLAPDGAWTFANLQQNHLMGPGFPYGL 1702
P+ N P PS+ + PL+ + P L Q+ P P
Sbjct: 952 QGINLDNSGPKLPEFSNRPPGYPSQPVEQRPLQQMPP-------QLMQHVAPPPQPPQQQ 1004
Query: 1703 P----PLPHRPPQNPFVQIQNHQHAIGQEPFHPLSSRTVSSSSLP-SLEEYEPRGPGRPL 1757
P P +PP Q Q Q Q + + S LP S + PRGP P
Sbjct: 1005 PQPQLPQQQQPPPPSQPQSQQQQQQQQQMMMMLMMQQDPKSVRLPVSQNVHPPRGPLNPD 1064
Query: 1758 YQRR---------ISSSSVQPCSEEVSTPQDSLAQCKELQDHSNQSSFNFSSPESWVNTT 1808
QR + S P S S + + SN + +++
Sbjct: 1065 SQRMPMQQSGSVPVMVSLQGPASVPPSPDKQRMPMPVNTPLGSNSRKMVYQESPQNPSSS 1124
Query: 1809 SSTPYQNIP-CNGSSRTAQPRELIAPPKTVKPPEDQLKSENLEVSSSFNYSVLQHLGQFP 1867
++P +GS + P P V P++QL + S + Q P
Sbjct: 1125 PLAEMASLPEASGSEAPSVPGGPNNMPSHVVLPQNQLMMTGPKPGPSPLSATQGATPQQP 1184
Query: 1868 PL--MPNKQIAESANSSSPQSSAGGKPAMSYASALRAPPKPRPP--PEQAKKSSDP--LS 1921
P+ +P+ N ++P ++ K + RA P+P P P S++P +S
Sbjct: 1185 PVNSLPSSHGHHFPNVAAPTQTSRPK------TPNRASPRPYYPQTPNNRPPSTEPSEIS 1238
Query: 1922 LFQELSLGSSSG 1933
L E S +G
Sbjct: 1239 LSPERLNASIAG 1250
Score = 34.3 bits (77), Expect = 1.2
Identities = 61/273 (22%), Positives = 91/273 (33%), Gaps = 49/273 (17%)
Query: 1693 LMGPGFPYGLPPLPHRP--------PQNPFVQIQNHQHAIGQ--EPFHPLS----SRTVS 1738
+M PG L P RP P + IQ H G P HP+ +R ++
Sbjct: 194 MMAPGPNPELQPRTPRPASQSDAMDPLLSGLHIQQQSHPSGSLAPPHHPMQPVSVNRQMN 253
Query: 1739 SSSLPSLEEYEPRGPGRPLYQRRISSSSVQPCSEEVSTPQDSLAQCKELQDHSNQSSFNF 1798
++ P L++ Q++ Q ++ Q Q + Q H Q
Sbjct: 254 PANFPQLQQ-----------QQQQQQQQQQQQQQQQQQQQQQQLQARPPQQHQQQQPQGI 302
Query: 1799 SS----------PESWVNTTSSTPYQNIPCNGSSRTAQPRELIAPPKTVKPPEDQLKSEN 1848
P W N S Q P GS T + P + QL++
Sbjct: 303 RPQFTAPTQVPVPPGW-NQLPSGALQPPPAQGSLGTMTANQGWKKAPLPGPMQQQLQARP 361
Query: 1849 LEVSSSFNYSVLQHLGQFPPLMP-NKQIAESANSSSPQSSAGGKPAMSYASALRAPPKPR 1907
+ + +Q PP P Q A A+++ PQ S G+ +L+ P
Sbjct: 362 -------SLATVQTPSHPPPPYPFGSQQASQAHTNFPQMSNPGQFTAPQMKSLQGGPSRV 414
Query: 1908 PPPEQA-----KKSSDPLSLFQELSLGSSSGSN 1935
P P Q K + S FQ+ S SS N
Sbjct: 415 PTPLQQPHLTNKSPASSPSSFQQGSPASSPTVN 447
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 52.8 bits (125), Expect = 3e-06
Identities = 48/198 (24%), Positives = 84/198 (42%), Gaps = 30/198 (15%)
Query: 1288 GPEINKIRTPEKKPTEPKQVDLESNPQNRSPE-SRPSVVYPSTKFPRKDNLNPRHINLPL 1346
GPEI++ P KKP P +V P + PE + VV + P + + P + L
Sbjct: 10442 GPEISEKIIPPKKP--PTKVVPRKEPPAKVPEVPKKIVVEEKVRVPEEPRVPPTKVPEVL 10499
Query: 1347 PAPHAQYAIPNRHFHPLPQLPRPPFPIPQQHTLLNQQQNNLPEQPNQIPPQPNQVVQQQS 1406
P +P + P+P +P P P+ +PE P ++ P+ V
Sbjct: 10500 PPKEV---VPEKKV-PVPPAKKPEAPPPK-----------VPEAPKEVVPEKKVPVPPP- 10543
Query: 1407 QLNQQPQQPPPQLSPAYQAGPNNAFFNSAVAHRPQSPPAEA------VIPEQQPP--PML 1458
++P+ PP ++ +A A+ +P+SPP E V+PE++ P P
Sbjct: 10544 ---KKPEVPPTKVPEVPKAAVPEKKVPEAIPPKPESPPPEVPEAPKEVVPEKKVPAAPPK 10600
Query: 1459 QEGHSPLRAIAQPGPILP 1476
+ +P++ P ++P
Sbjct: 10601 KPEVTPVKVPEAPKEVVP 10618
Score = 44.7 bits (104), Expect = 0.001
Identities = 52/231 (22%), Positives = 84/231 (36%), Gaps = 43/231 (18%)
Query: 1248 PIPYGLGHHPPVTIGQPQNQHQEKDQHEQNRNGKSDTNNSGPEINKIRTPEKKPTEPKQV 1307
P+P PP +P+ E++ + PE+ P P EPK++
Sbjct: 10791 PVPERAESPPPEVYEEPEEIAPEEEIAPEEEKPVPVAEEEEPEV----PPPAVPEEPKKI 10846
Query: 1308 DLESN-PQNRSPESRPSVVYPSTKFPRKDNLNPRHINLPLPAPHAQ---------YAIPN 1357
E P + PE+ P K K L PR P PAP + AIP
Sbjct: 10847 IPEKKVPVIKKPEAPPPKEPEPEKVIEKPKLKPRPPPPP-PAPPKEDVKEKIFQLKAIPK 10905
Query: 1358 RHFHPLPQLPRP----PFPIPQQHTLLNQQQNNLPEQPNQIPPQPNQVVQQQSQLNQQPQ 1413
+ PQ+P P +P + + LPE+ P+P + V +S L ++P+
Sbjct: 10906 KKVPEKPQVPEKVELTPLKVPGGEKKVRKL---LPERK----PEPKEEVVLKSVLRKRPE 10958
Query: 1414 QPPPQLSPAYQAGPNNAFFNSAVAHRPQSPPAEAVIPEQQPPPMLQEGHSP 1464
+ P++ P + + +PE PP ++E P
Sbjct: 10959 EEEPKVEP-----------------KKLEKVKKPAVPEPPPPKPVEEVEVP 10992
Score = 42.7 bits (99), Expect = 0.003
Identities = 48/226 (21%), Positives = 85/226 (37%), Gaps = 43/226 (19%)
Query: 1289 PEINKIRTPEKKP----------------TEPKQVDLESNPQNRSPESRPSVVYPSTKFP 1332
PE+ K+ PEKK EP++V LE P E P+ T P
Sbjct: 10638 PEVPKVAVPEKKVPEAIPPKPESPPPEVFEEPEEVALEEPPAEVVEEPEPAAPPQVTVPP 10697
Query: 1333 RKDNLNPRHINLPLPAPHAQYAIPNRHFHP---LPQLPRPPFPIPQQHTLLNQQQN---- 1385
+K P+P A + + P +P++P+ P + ++ ++
Sbjct: 10698 KK----------PVPEKKAPAVVAKKPELPPVKVPEVPKEVVPEKKVPLVVPKKPEAPPA 10747
Query: 1386 NLPEQPNQIPPQPNQVVQQQ-----SQLNQQPQQPPPQLSPAYQAGPNNAFFNSAVAHRP 1440
+PE P ++ P+ V ++ +++ + P++P + PA V P
Sbjct: 10748 KVPEVPKEVVPEKKVAVPKKPEVPPAKVPEVPKKPVLEEKPAVPVPERAESPPPEVYEEP 10807
Query: 1441 QS-PPAEAVIPEQQPPPMLQEGHSPLRAIAQPGPILPSHLNSFIDE 1485
+ P E + PE++ P + E P P P +P I E
Sbjct: 10808 EEIAPEEEIAPEEEKPVPVAEEEEP----EVPPPAVPEEPKKIIPE 10849
Score = 40.0 bits (92), Expect = 0.022
Identities = 44/174 (25%), Positives = 61/174 (35%), Gaps = 38/174 (21%)
Query: 1289 PEINKIRTPEKKPTEPKQVDLESNPQNRSPESRPSVVYPSTKFPRKDNLNPRHINLPLPA 1348
PE+ K PEKK E ES P PE+ P V P K P P P+
Sbjct: 10554 PEVPKAAVPEKKVPEAIPPKPESPPPE-VPEA-PKEVVPEKKVPAAPPKKPEVT--PVKV 10609
Query: 1349 PHAQYAIPNRHFHPLPQLPRPPFPIPQQHTLLNQQQNNLPEQPNQIPPQPNQVVQQQS-- 1406
P A + P+P +P P P ++P P V ++
Sbjct: 10610 PEAPKEVVPEKKVPVPPPKKPEVP------------------PTKVPEVPKVAVPEKKVP 10651
Query: 1407 -QLNQQPQQPPPQLSPAYQAGPNNAFFNSAVAHRPQSPPAEAVI-PEQQPPPML 1458
+ +P+ PPP++ F + PPAE V PE PP +
Sbjct: 10652 EAIPPKPESPPPEV------------FEEPEEVALEEPPAEVVEEPEPAAPPQV 10693
Score = 39.7 bits (91), Expect = 0.029
Identities = 41/224 (18%), Positives = 90/224 (40%), Gaps = 24/224 (10%)
Query: 1297 PEKKPTEPKQVDLESNPQNRSPESRPSVVYPSTKFPRKDNLNPR---HINLPLPAPHAQY 1353
PE++ P++ ++ + PE V +F ++ + P + +P P P +
Sbjct: 10135 PEEEEVLPEEEEIPPEEEEVPPEEE--YVPEEEEFVPEEEVLPEVKPKVPVPAPVPEIKK 10192
Query: 1354 AIPNRHFHPLPQLPRPPFPIPQQHTLLNQQQNNLPEQPNQIPPQPNQVVQQQSQLNQQPQ 1413
+ + + PP +P+ + +++ LP++ +P + + +++ ++
Sbjct: 10193 KVTEKKVVIPKKEEAPPAKVPEVPKKVEEKRIILPKEEEVLPVEVTEEPEEEPISEEEIP 10252
Query: 1414 QPPPQLSPAYQAGPNNA--FFNSAVAHRP-------QSPPAEA--VIPEQQPPPMLQEGH 1462
+ PP + + P AV P ++PPA+ IPE++ P +Q+
Sbjct: 10253 EEPPSIEEVEEVAPPRVPEVIKKAVPEAPTPVPKKVEAPPAKVSKKIPEEKVPVPVQKKE 10312
Query: 1463 SPLRAIAQPGPILPSHLNSFIDENPSGLPIGEALDRIHGSVALE 1506
+P + P +P + E +P EA+ G LE
Sbjct: 10313 APPAKV----PEVPKK----VPEKKVLVPKKEAVPPAKGRTVLE 10348
Score = 38.9 bits (89), Expect = 0.049
Identities = 43/167 (25%), Positives = 66/167 (39%), Gaps = 21/167 (12%)
Query: 1297 PEKKPTEPKQVDLESNPQNRSPESRPSVVYPSTKFPRKDNLNPRHINLP---LPAPHAQY 1353
P K P PK+ LE P PE S P + + + P P P P A+
Sbjct: 10772 PAKVPEVPKKPVLEEKPAVPVPERAESP--PPEVYEEPEEIAPEEEIAPEEEKPVPVAEE 10829
Query: 1354 AIPNRHFHPLPQLPRPPFPI-PQQHTLLNQQQNNLPEQPNQIPPQPNQVVQQQSQLNQQP 1412
P P P +P P I P++ + ++ PE P P+P +V+++ +P
Sbjct: 10830 EEPEV---PPPAVPEEPKKIIPEKKVPVIKK----PEAPPPKEPEPEKVIEKP---KLKP 10879
Query: 1413 QQPPPQLSPAYQAGPNNAFFNSA-----VAHRPQSPPAEAVIPEQQP 1454
+ PPP +P + F A V +PQ P + P + P
Sbjct: 10880 RPPPPPPAPPKEDVKEKIFQLKAIPKKKVPEKPQVPEKVELTPLKVP 10926
Score = 38.5 bits (88), Expect = 0.065
Identities = 40/193 (20%), Positives = 76/193 (39%), Gaps = 45/193 (23%)
Query: 1289 PEINKIRTPEKKPTEPKQVDLESNPQN-----RSPESRPSVVYPSTKFPRKDNLNPRHI- 1342
PE+ K PE+K P +E+ P + P V P+ P+K P +
Sbjct: 10005 PEVPKKPVPEEKVPVPVPKKVEAPPAKVPEVPKKPVPEKKVPVPA---PKKVEAPPAKVP 10061
Query: 1343 NLP---LPAPHAQYAIPNRHFHPLPQLP--RPPFPIP----------------QQHTLLN 1381
+P +P +P + P P++P R P P+P + +L
Sbjct: 10062 EVPKKLIPEEKKPTPVPKKVEAPPPKVPKKREPVPVPVALPQEEEVLFEEEIVPEEEVLP 10121
Query: 1382 QQQNNLPEQPNQIPPQPNQVVQQQSQLNQQPQQPPPQLSPAYQAGPNNAFFNSAVAHRPQ 1441
+++ LPE+ + P+ +V+ ++ ++ + ++ PP+ V +
Sbjct: 10122 EEEEVLPEEEE-VLPEEEEVLPEEEEIPPEEEEVPPE--------------EEYVPEEEE 10166
Query: 1442 SPPAEAVIPEQQP 1454
P E V+PE +P
Sbjct: 10167 FVPEEEVLPEVKP 10179
Score = 37.0 bits (84), Expect = 0.19
Identities = 63/344 (18%), Positives = 135/344 (39%), Gaps = 47/344 (13%)
Query: 1345 PLPAPHAQYAIPNRHFHP---LPQLPRPPFPIPQQHTLLNQQQNNLPEQPNQIPPQPNQV 1401
P P A IP + P +P++P+ P P ++ + +++ P + ++P +P
Sbjct: 9295 PAPEEVAPVPIPKKVEPPAPKVPEVPKKPVPEEKKPVPVPKKEPAAPPKVPEVPKKPVPE 9354
Query: 1402 VQQQSQLNQQPQQPPPQLSPAYQAGPNNAFFNSAVAHRPQSPP------AEAVIPEQQPP 1455
+ + ++ + PP ++ P Q G + V R +SPP + +PE++ P
Sbjct: 9355 EKIPVPVAKKKEAPPAKV-PEVQKGVVTEEKITIVTQREESPPPAVPEIPKKKVPEERKP 9413
Query: 1456 PMLQEGHSPLRAIAQPGPILPSHLNSFIDENPSG--LPIGEALDRIHGSVALETLRQQQA 1513
+E P P P +P+ + E +P+ + V+ +T+
Sbjct: 9414 VPRKEEEVP------PPPKVPALPKKPVPEEKVAVPVPVAKKAPPPRAEVSKKTV----- 9462
Query: 1514 RFQQWSEHHAFLSQGSVPYPHHHHPHLQHLPQ-PPLGLHQPPVRADWKLTSSAEDEVETT 1572
E F+++ + + +PQ + H+ +W S +E+E +
Sbjct: 9463 -----VEEKRFVAEEKLSFA---------VPQRVEVTRHEVSAEEEW---SYSEEEEGVS 9505
Query: 1573 YSRFQDLIRELSHRDQSETRELAEMPPPQSRLLQYR-QVQSRSPPAVPSPPSSTDHSSHF 1631
S +++ RE +++E E M P+ +++ + + S+ A P+ +
Sbjct: 9506 ISVYREEERE--EEEEAEVTEYEVMEEPEEYVVEEKLHIISKRVEAEPAEVTERQEKKIV 9563
Query: 1632 --SNFNDNSRDIEVASNPAFPQRLPPQIFNSPFSLPSEHLAPPP 1673
+ A P P+++ P+ P +P + PPP
Sbjct: 9564 LKPKIPAKIEEPPPAKVPEAPKKIVPE-KKVPAPVPKKEKVPPP 9606
Score = 37.0 bits (84), Expect = 0.19
Identities = 39/208 (18%), Positives = 86/208 (41%), Gaps = 23/208 (11%)
Query: 1297 PEKKPTEPKQVDLESNPQNRSPESRPSVVYPSTKFPRKDNLNPRHI--NLPLPAPHAQYA 1354
P K P EPK+V E + + + V P+ K P K P+ + +P P + A
Sbjct: 9836 PPKVPEEPKKVFEEKIRISITKREKEQVTEPAAKVPMK----PKRVVAEEKVPVPRKEVA 9891
Query: 1355 IPNRHFHPLPQLPR--PPFPIPQQHTLLNQQQNNLPEQPNQIPPQPNQVVQQQS------ 1406
P R +P++P+ P + + ++ + L E+ + + + + ++
Sbjct: 9892 PPVR----VPEVPKELEPEEVAFEEEVVTHVEEYLVEEEEEYIHEEEEFITEEEVVPVIP 9947
Query: 1407 -QLNQQPQQPPPQLSPAYQAGPNNAFFNSAVAHRPQSPPAE--AVIPEQQPPPMLQEGHS 1463
++ + P++P P+ + V P+ P + +IP+++ PP +
Sbjct: 9948 VKVPEVPRKPVPEEKKPVPVPKKKEAPPAKVPEVPKKPEEKVPVLIPKKEKPPPAKVPEV 10007
Query: 1464 PLRAIAQPGPILPSHLNSFIDENPSGLP 1491
P + + P +P + ++ P+ +P
Sbjct: 10008 PKKPV--PEEKVPVPVPKKVEAPPAKVP 10033
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.132 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,112,521
Number of Sequences: 37866
Number of extensions: 4724273
Number of successful extensions: 29534
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 92
Number of HSP's successfully gapped in prelim test: 635
Number of HSP's that attempted gapping in prelim test: 22600
Number of HSP's gapped (non-prelim): 5409
length of query: 1942
length of database: 18,247,518
effective HSP length: 117
effective length of query: 1825
effective length of database: 13,817,196
effective search space: 25216382700
effective search space used: 25216382700
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 70 (31.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.