Guide to the Human Genome
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Name: DNA2 Sequence: fasta or formatted (1146aa) NCBI GI: 122937299
Description:

DNA replication helicase 2 homolog

Referenced in:

Replication Proteins
RNases and RNA Stability

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.1         59           2
 C cysteine            3.1         35           1
 D aspartate           4.3         49           1
 E glutamate           6.6         76           3
 F phenylalanine       4.1         47           2
 G glycine             5.1         58           2
 H histidine           2.3         26           1
 I isoleucine          6.5         74           2
 K lysine              7.1         81           2
 L leucine            11.9        136           3
 M methionine          2.7         31           1
 N asparagine          4.5         52           2
 P proline             4.7         54           2
 Q glutamine           4.9         56           2
 R arginine            5.2         60           2
 S serine              7.8         89           2
 T threonine           4.7         54           3
 V valine              6.2         71           2
 W tryptophan          0.9         10           1
 Y tyrosine            2.4         28           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DNA replication helicase 2 homolog 
UPF1                  0.066   regulator of nonsense transcripts 1 
IGHMBP2               0.064   immunoglobulin mu binding protein 2 
MOV10L1               0.038   MOV10-like 1 
SETX                  0.034   senataxin 
ZNFX1                 0.029   zinc finger, NFX1-type containing 1 
PRIC285               0.029   PPAR-alpha interacting complex protein 285 isoform ...
PRIC285               0.029   PPAR-alpha interacting complex protein 285 isoform ...
MOV10                 0.027   Mov10, Moloney leukemia virus 10, homolog 
MOV10                 0.027   Mov10, Moloney leukemia virus 10, homolog 
AQR                   0.025   aquarius 
HELZ                  0.024   helicase with zinc finger domain 
DNAH10                0.004   dynein, axonemal, heavy chain 10 
DNAH5                 0.004   dynein, axonemal, heavy chain 5 
EEA1                  0.003   early endosome antigen 1, 162kD 
CCDC91                0.003   GGA binding partner 
APOB                  0.003   apolipoprotein B precursor 
LOC100293107          0.003   PREDICTED: hypothetical protein 
LOC100290679          0.003   PREDICTED: hypothetical protein XP_002347834 
LOC100288571          0.003   PREDICTED: hypothetical protein XP_002343612 
KIAA1529              0.003   hypothetical protein LOC57653 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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