| Name: TSG101 | Sequence: fasta or formatted (390aa) | NCBI GI: 5454140 | |
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Description: tumor susceptibility gene 101
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Referenced in: Ubiquitin and Related Protein Modifications
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 4.9 19 1 C cysteine 0.8 3 1 D aspartate 5.6 22 1 E glutamate 6.7 26 2 F phenylalanine 1.8 7 1 G glycine 5.6 22 2 H histidine 1.3 5 1 I isoleucine 5.6 22 2 K lysine 6.9 27 3 L leucine 10.0 39 2 M methionine 3.1 12 1 N asparagine 4.1 16 2 P proline 9.2 36 2 Q glutamine 3.6 14 1 R arginine 4.6 18 2 S serine 7.4 29 2 T threonine 5.9 23 2 V valine 6.2 24 2 W tryptophan 0.8 3 1 Y tyrosine 5.9 23 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 tumor susceptibility gene 101 UEVLD 0.191 ubiquitin-conjugating enzyme E2-like isoform a [Hom... UEVLD 0.191 ubiquitin-conjugating enzyme E2-like isoform b [Hom... PRR13 0.036 proline rich 13 isoform 1 PELP1 0.035 proline, glutamic acid and leucine rich protein 1 [... GRINA 0.033 glutamate receptor, ionotropic, N-methyl D-aspartate... GRINA 0.033 glutamate receptor, ionotropic, N-methyl D-aspartate... PDCD6IP 0.033 programmed cell death 6 interacting protein isoform... PDCD6IP 0.033 programmed cell death 6 interacting protein isoform ... ANXA11 0.031 annexin A11 ANXA11 0.031 annexin A11 ANXA11 0.031 annexin A11 FOSB 0.030 FBJ murine osteosarcoma viral oncogene homolog B is... ANXA7 0.029 annexin VII isoform 1 PEF1 0.027 penta-EF-hand domain containing 1 FMN1 0.026 formin 1 ANXA7 0.026 annexin VII isoform 2 POLR2A 0.026 DNA-directed RNA polymerase II A ATN1 0.026 atrophin-1 ATN1 0.026 atrophin-1 VPS37A 0.025 hepatocellular carcinoma related protein 1 isoform ... CPSF6 0.025 cleavage and polyadenylation specific factor 6, 68 ... COL4A5 0.025 type IV collagen alpha 5 isoform 2 precursor COL4A5 0.025 type IV collagen alpha 5 isoform 1 precursor COL4A5 0.025 type IV collagen alpha 5 isoform 3 precursor CCBE1 0.023 collagen and calcium binding EGF domains 1 NACA 0.023 nascent polypeptide-associated complex alpha subuni... SMG6 0.022 Smg-6 homolog, nonsense mediated mRNA decay factor ... WASL 0.022 Wiskott-Aldrich syndrome gene-like protein COL11A2 0.022 collagen, type XI, alpha 2 isoform 2 preproprotein ...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
