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Search of human proteins with 5454112
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|5454112 transcription factor Dp-2 (E2F dimerization partner
2) [Homo sapiens]
(386 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|5454112 transcription factor Dp-2 (E2F dimerization partner 2... 764 0.0
gi|6005900 transcription factor Dp-1 [Homo sapiens] 437 e-123
gi|189409125 transcription factor Dp family, member 3 [Homo sapi... 330 2e-90
gi|12669915 E2F transcription factor 4 [Homo sapiens] 43 4e-04
gi|134142809 E2F transcription factor 5 isoform 2 [Homo sapiens] 39 0.008
gi|134142811 E2F transcription factor 5 isoform 1 [Homo sapiens] 39 0.008
gi|4503433 E2F transcription factor 3 [Homo sapiens] 37 0.023
gi|12669911 E2F transcription factor 1 [Homo sapiens] 34 0.25
gi|44890059 involucrin [Homo sapiens] 34 0.25
gi|145580626 E2F transcription factor 7 [Homo sapiens] 34 0.25
gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... 34 0.25
gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... 34 0.25
gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... 34 0.25
gi|13124875 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... 34 0.25
gi|30581135 structural maintenance of chromosomes 1A [Homo sapiens] 33 0.33
gi|22758136 MAP7 domain containing 2 [Homo sapiens] 33 0.43
gi|38505226 E2F family member 8 [Homo sapiens] 33 0.57
gi|171184451 centrosome-associated protein 350 [Homo sapiens] 33 0.57
gi|81295816 nasopharyngeal epithelium specific protein 1 [Homo s... 33 0.57
gi|70166430 GRINL1A combined protein isoform 2 [Homo sapiens] 32 0.74
gi|70166414 GRINL1A combined protein isoform 1 [Homo sapiens] 32 0.74
gi|111494235 GRINL1A combined protein isoform 8 [Homo sapiens] 32 0.74
gi|70166580 GRINL1A upstream protein isoform 7 [Homo sapiens] 32 0.74
gi|4758226 E2F transcription factor 2 [Homo sapiens] 32 0.74
gi|109637795 E2F transcription factor 6 [Homo sapiens] 32 0.74
gi|8922950 meiosis-specific nuclear structural 1 [Homo sapiens] 32 0.74
gi|18093112 ABT1-associated protein [Homo sapiens] 32 0.74
gi|164419758 bromodomain containing 2 [Homo sapiens] 32 0.97
gi|4826806 bromodomain containing 2 [Homo sapiens] 32 0.97
gi|120431743 huntingtin-associated protein 1 isoform 3 [Homo sap... 32 0.97
>gi|5454112 transcription factor Dp-2 (E2F dimerization partner 2)
[Homo sapiens]
Length = 386
Score = 764 bits (1973), Expect = 0.0
Identities = 386/386 (100%), Positives = 386/386 (100%)
Query: 1 MIISTPQRLTSSGSVLIGSPYTPAPAMVTQTHIAEATGWVPGDRKRARKFIDSDFSESKR 60
MIISTPQRLTSSGSVLIGSPYTPAPAMVTQTHIAEATGWVPGDRKRARKFIDSDFSESKR
Sbjct: 1 MIISTPQRLTSSGSVLIGSPYTPAPAMVTQTHIAEATGWVPGDRKRARKFIDSDFSESKR 60
Query: 61 SKKGDKNGKGLRHFSMKVCEKVQRKGTTSYNEVADELVSEFTNSNNHLAADSQAYDQKNI 120
SKKGDKNGKGLRHFSMKVCEKVQRKGTTSYNEVADELVSEFTNSNNHLAADSQAYDQKNI
Sbjct: 61 SKKGDKNGKGLRHFSMKVCEKVQRKGTTSYNEVADELVSEFTNSNNHLAADSQAYDQKNI 120
Query: 121 RRRVYDALNVLMAMNIISKEKKEIKWIGLPTNSAQECQNLEIEKQRRIERIKQKRAQLQE 180
RRRVYDALNVLMAMNIISKEKKEIKWIGLPTNSAQECQNLEIEKQRRIERIKQKRAQLQE
Sbjct: 121 RRRVYDALNVLMAMNIISKEKKEIKWIGLPTNSAQECQNLEIEKQRRIERIKQKRAQLQE 180
Query: 181 LLLQQIAFKNLVQRNRQNEQQNQGPPALNSTIQLPFIIINTSRKTVIDCSISSDKFEYLF 240
LLLQQIAFKNLVQRNRQNEQQNQGPPALNSTIQLPFIIINTSRKTVIDCSISSDKFEYLF
Sbjct: 181 LLLQQIAFKNLVQRNRQNEQQNQGPPALNSTIQLPFIIINTSRKTVIDCSISSDKFEYLF 240
Query: 241 NFDNTFEIHDDIEVLKRMGMSFGLESGKCSLEDLKLAKSLVPKALEGYITDISTGPSWLN 300
NFDNTFEIHDDIEVLKRMGMSFGLESGKCSLEDLKLAKSLVPKALEGYITDISTGPSWLN
Sbjct: 241 NFDNTFEIHDDIEVLKRMGMSFGLESGKCSLEDLKLAKSLVPKALEGYITDISTGPSWLN 300
Query: 301 QGLLLNSTQSVSNLDLTTGATLPQSSVNQGLCLDAEVALATGQFLAPNSHQSSSAASHCS 360
QGLLLNSTQSVSNLDLTTGATLPQSSVNQGLCLDAEVALATGQFLAPNSHQSSSAASHCS
Sbjct: 301 QGLLLNSTQSVSNLDLTTGATLPQSSVNQGLCLDAEVALATGQFLAPNSHQSSSAASHCS 360
Query: 361 ESRGETPCSFNDEDEEDDEEDSSSPE 386
ESRGETPCSFNDEDEEDDEEDSSSPE
Sbjct: 361 ESRGETPCSFNDEDEEDDEEDSSSPE 386
>gi|6005900 transcription factor Dp-1 [Homo sapiens]
Length = 410
Score = 437 bits (1124), Expect = e-123
Identities = 233/386 (60%), Positives = 284/386 (73%), Gaps = 39/386 (10%)
Query: 1 MIISTPQRLTSSGSVLIGSPYTPAPAMVTQTHIAEATGWVPGDRKRARKFIDSDFSESKR 60
++I TPQR +S ++++GSP+TP+ +Q ++++ W G KR
Sbjct: 62 VVIGTPQRPAASNTLVVGSPHTPSTHFASQNQPSDSSPWSAG----------------KR 105
Query: 61 SKKGDKNGKGLRHFSMKVCEKVQRKGTTSYNEVADELVSEFTNSNNHLAADSQAYDQKNI 120
++KG+KNGKGLRHFSMKVCEKVQRKGTTSYNEVADELV+EF+ ++NH+ + AYDQKNI
Sbjct: 106 NRKGEKNGKGLRHFSMKVCEKVQRKGTTSYNEVADELVAEFSAADNHILPNESAYDQKNI 165
Query: 121 RRRVYDALNVLMAMNIISKEKKEIKWIGLPTNSAQECQNLEIEKQRRIERIKQKRAQLQE 180
RRRVYDALNVLMAMNIISKEKKEIKWIGLPTNSAQECQNLE+E+QRR+ERIKQK++QLQE
Sbjct: 166 RRRVYDALNVLMAMNIISKEKKEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQE 225
Query: 181 LLLQQIAFKNLVQRNRQNEQQNQGPPALNSTIQLPFIIINTSRKTVIDCSISSDKFEYLF 240
L+LQQIAFKNLVQRNR EQQ PP NS I LPFII+NTS+KTVIDCSIS+DKFEYLF
Sbjct: 226 LILQQIAFKNLVQRNRHAEQQASRPPPPNSVIHLPFIIVNTSKKTVIDCSISNDKFEYLF 285
Query: 241 NFDNTFEIHDDIEVLKRMGMSFGLESGKCSLEDLKLAKSLVPKALEGYITDISTGPSWLN 300
NFDNTFEIHDDIEVLKRMGM+ GLESG CS EDLK+A+SLVPKALE Y+T+++ G
Sbjct: 286 NFDNTFEIHDDIEVLKRMGMACGLESGSCSAEDLKMARSLVPKALEPYVTEMAQGTV--- 342
Query: 301 QGLLLNSTQSVSNLDLTTGATLPQSSVNQGLCLDAEVALATGQFLAPNSHQSSSAASHCS 360
G+ + + S SN G S + G A+ LAT SS S S
Sbjct: 343 GGVFITTAGSTSN-----GTRFSASDLTNG----ADGMLAT-----------SSNGSQYS 382
Query: 361 ESRGETPCSFNDEDEEDDEEDSSSPE 386
SR ETP S+ ED+E+D++ + + E
Sbjct: 383 GSRVETPVSYVGEDDEEDDDFNENDE 408
>gi|189409125 transcription factor Dp family, member 3 [Homo
sapiens]
Length = 405
Score = 330 bits (845), Expect = 2e-90
Identities = 188/384 (48%), Positives = 248/384 (64%), Gaps = 42/384 (10%)
Query: 1 MIISTPQRLTSSGSVLIGSPYTPAPAMVTQT-HIAEATGWVPGDRKRARKFIDSDFSESK 59
++I PQR +S ++GSP P+ +Q H + W +
Sbjct: 57 VVIGMPQRPAASNIPVVGSPNPPSTHFASQNQHSYSSPPWA-----------------GQ 99
Query: 60 RSKKGDKNGKGLRHFSMKVCEKVQRKGTTSYNEVADELVSEFTNSNNHLAADSQAYDQKN 119
++KG+KNG GL SMKV E VQRKGTTS EV ELV++F ++NH + + AYD KN
Sbjct: 100 HNRKGEKNGMGLCRLSMKVWETVQRKGTTSCQEVVGELVAKFRAASNHASPNESAYDVKN 159
Query: 120 IRRRVYDALNVLMAMNIISKEKKEIKWIGLPTNSAQECQNLEIEKQRRIERIKQKRAQLQ 179
I+RR YDALNVLMAMNIIS+EKK+IKWIGL TNSAQ CQNL +E+Q+R+ERIKQK+++LQ
Sbjct: 160 IKRRTYDALNVLMAMNIISREKKKIKWIGLTTNSAQNCQNLRVERQKRLERIKQKQSELQ 219
Query: 180 ELLLQQIAFKNLVQRNRQNEQQNQGPPALNSTIQLPFIIINTSRKTVIDCSISSDKFEYL 239
+L+LQQIAFKNLV RN+ E+Q P NS I +PFIII++S+KTVI+CSIS DK EYL
Sbjct: 220 QLILQQIAFKNLVLRNQYVEEQVSQRPLPNSVIHVPFIIISSSKKTVINCSISDDKSEYL 279
Query: 240 FNFDNTFEIHDDIEVLKRMGMSFGLESGKCSLEDLKLAKSLVPKALEGYITDISTGPSWL 299
F F+++FEIHDD EVL MGM+FGLESG CS EDLK+A++LVPKALE Y+T+++ G
Sbjct: 280 FKFNSSFEIHDDTEVLMWMGMTFGLESGSCSAEDLKMARNLVPKALEPYVTEMAQG---- 335
Query: 300 NQGLLLNSTQSVSNLDLTTGATLPQSSVNQGLCLDAEVALATGQFLAPNSHQSSSAASHC 359
G + + S SN G L S + +A G +SS S
Sbjct: 336 TFGGVFTTAGSRSN-----GTWLSASDLTN---------IAIGML------ATSSGGSQY 375
Query: 360 SESRGETPCSFNDEDEEDDEEDSS 383
S SR ETP +E+E+++++D S
Sbjct: 376 SGSRVETPAVEEEEEEDNNDDDLS 399
>gi|12669915 E2F transcription factor 4 [Homo sapiens]
Length = 413
Score = 43.1 bits (100), Expect = 4e-04
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 108 LAADSQAYDQKNIRRRVYDALNVLMAMNIISKE-KKEIKWIGL-PTNSAQECQNLEIEKQ 165
LAAD+ A QK RR+YD NVL + +I K+ K I+W G+ P + +E + IE +
Sbjct: 45 LAADTLAVRQK---RRIYDITNVLEGIGLIEKKSKNSIQWKGVGPGCNTREIADKLIELK 101
Query: 166 RRIERIKQKRAQLQE 180
IE ++Q+ +L +
Sbjct: 102 AEIEELQQREQELDQ 116
>gi|134142809 E2F transcription factor 5 isoform 2 [Homo sapiens]
Length = 345
Score = 38.9 bits (89), Expect = 0.008
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 13/78 (16%)
Query: 109 AADSQAYDQKNIRRRVYDALNVLMAMNIISKE-KKEIKWIGLPTNSAQECQNLEIEKQRR 167
AAD+ A QK RR+YD NVL +++I K+ K I+W G+ C E+
Sbjct: 79 AADTLAVRQK---RRIYDITNVLEGIDLIEKKSKNSIQWKGVGAG----CNTKEV----- 126
Query: 168 IERIKQKRAQLQELLLQQ 185
I+R++ +A++++L L++
Sbjct: 127 IDRLRYLKAEIEDLELKE 144
>gi|134142811 E2F transcription factor 5 isoform 1 [Homo sapiens]
Length = 346
Score = 38.9 bits (89), Expect = 0.008
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 13/78 (16%)
Query: 109 AADSQAYDQKNIRRRVYDALNVLMAMNIISKE-KKEIKWIGLPTNSAQECQNLEIEKQRR 167
AAD+ A QK RR+YD NVL +++I K+ K I+W G+ C E+
Sbjct: 79 AADTLAVRQK---RRIYDITNVLEGIDLIEKKSKNSIQWKGVGAG----CNTKEV----- 126
Query: 168 IERIKQKRAQLQELLLQQ 185
I+R++ +A++++L L++
Sbjct: 127 IDRLRYLKAEIEDLELKE 144
>gi|4503433 E2F transcription factor 3 [Homo sapiens]
Length = 465
Score = 37.4 bits (85), Expect = 0.023
Identities = 44/216 (20%), Positives = 89/216 (41%), Gaps = 20/216 (9%)
Query: 1 MIISTPQRLTSSGSVLIGSPYTPAP--AMVTQTHIAEATGWVPGDRKRARKFIDSDFSES 58
++ S P ++GS+L +P+ P+ ++ Q G G A++ ++ S
Sbjct: 84 LLPSAPGAEQTAGSLLYTTPHGPSSRAGLLQQPPALGRGGSGGGGGPPAKRRLELGESGH 143
Query: 59 KRSKKGDKNGKGLRHFSMKVCEKVQRKGTTSYNEVADELVSEFTNSNNHLAADSQ----- 113
+ G K KG +++ + + + S D + T L + S
Sbjct: 144 QYLSDGLKTPKGKGRAALRSPDSPKTPKSPSEKTRYDTSLGLLTKKFIQLLSQSPDGVLD 203
Query: 114 ----AYDQKNIRRRVYDALNVLMAMNIISKE-KKEIKWIGLPTNS----AQECQNLEIEK 164
A K +RR+YD NVL +++I K+ K ++W+G + +CQ L
Sbjct: 204 LNKAAEVLKVQKRRIYDITNVLEGIHLIKKKSKNNVQWMGCSLSEDGGMLAQCQGL---- 259
Query: 165 QRRIERIKQKRAQLQELLLQQIAFKNLVQRNRQNEQ 200
+ + + Q+ +L EL+ L+ + +N++
Sbjct: 260 SKEVTELSQEEKKLDELIQSCTLDLKLLTEDSENQR 295
>gi|12669911 E2F transcription factor 1 [Homo sapiens]
Length = 437
Score = 33.9 bits (76), Expect = 0.25
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 10/61 (16%)
Query: 121 RRRVYDALNVLMAMNIISKE-KKEIKWIGLPTNSAQECQNLEIEKQRRIERIKQKRAQLQ 179
+RR+YD NVL + +I+K+ K I+W+G T + R+E + Q QLQ
Sbjct: 164 KRRIYDITNVLEGIQLIAKKSKNHIQWLGSHTT---------VGVGGRLEGLTQDLRQLQ 214
Query: 180 E 180
E
Sbjct: 215 E 215
>gi|44890059 involucrin [Homo sapiens]
Length = 585
Score = 33.9 bits (76), Expect = 0.25
Identities = 18/57 (31%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 147 IGLPTNSAQECQNLEIEKQRRIERIKQKRAQLQELLLQQIAFKNLVQRNRQNEQQNQ 203
+GLP + + LE ++Q + + ++++ QL+ L+ Q+ K+LVQ+ Q EQQ +
Sbjct: 363 LGLPEQQVLQLKQLE-KQQGQPKHLEEEEGQLKHLVQQEGQLKHLVQQEGQLEQQER 418
>gi|145580626 E2F transcription factor 7 [Homo sapiens]
Length = 911
Score = 33.9 bits (76), Expect = 0.25
Identities = 39/169 (23%), Positives = 71/169 (42%), Gaps = 22/169 (13%)
Query: 54 DFSESK--RSKKGDKNGKGLRHFSMK--VCEKVQRKGTTSYNEVADELVSEFTNSNNHLA 109
DFSE S + K LR S K + V + + + A L+ E ++ +H
Sbjct: 268 DFSEPDCPSSSANSRKDKSLRIMSQKFVMLFLVSKTKIVTLDVAAKILIEESQDAPDHSK 327
Query: 110 ADSQAYDQKNIRRRVYDALNVLMAMNIISK--------EKKEIKWIGLPTNSAQECQNLE 161
++ RR+YD NVL ++ +I K K KWIG S+ + + ++
Sbjct: 328 FKTKV-------RRLYDIANVLTSLALIKKVHVTEERGRKPAFKWIGPVDFSSSDEELVD 380
Query: 162 IEKQRRIERIKQKRAQLQELLLQQIAFK---NLVQRNRQNEQQNQGPPA 207
+ E ++ Q+Q Q++A N VQ + + +++ P+
Sbjct: 381 VSASVLPELKRETYGQIQVCAKQKLARHGSFNTVQASERIQRKVNSEPS 429
Score = 33.1 bits (74), Expect = 0.43
Identities = 36/130 (27%), Positives = 62/130 (47%), Gaps = 14/130 (10%)
Query: 121 RRRVYDALNVLMAMNIISK-EKKEIKWIG---LPTNSAQECQNLEIEKQRRIERIKQKRA 176
RRR+YD +NVL +++++S+ K + W G LP + + Q L E ++ +++ A
Sbjct: 183 RRRIYDIVNVLESLHLVSRVAKNQYGWHGRHSLP-KTLRNLQRLGEE-----QKYEEQMA 236
Query: 177 QLQELLLQQIAFKNLVQRNRQNEQQNQGPPALN-STIQLPFIIINTSRKTVIDCSISSDK 235
LQ+ L I +K +R + + +Q L+ S P N+ + + I S K
Sbjct: 237 YLQQKELDLIDYK-FGERKKDGDPDSQEQQLLDFSEPDCPSSSANSRKDKSL--RIMSQK 293
Query: 236 FEYLFNFDNT 245
F LF T
Sbjct: 294 FVMLFLVSKT 303
>gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Homo
sapiens]
Length = 1972
Score = 33.9 bits (76), Expect = 0.25
Identities = 27/119 (22%), Positives = 58/119 (48%), Gaps = 5/119 (4%)
Query: 84 RKGTTSYNEVADELVSEFTNSNNHLAADSQAYDQ-KNIRRRVYDALNVLMAMNIISKEKK 142
RK T ++++EL +E + + + +A Q Q K +R ++++ + + +
Sbjct: 1760 RKATQQAEQLSNELATERSTAQKNESARQQLERQNKELRSKLHEMEGAVKSKFKSTIAAL 1819
Query: 143 EIKWIGLPTNSAQECQNLEIEKQRRIERIKQKRAQLQELLLQQIAFKNLVQRNRQNEQQ 201
E K L QE + EKQ + +KQK +L+E+LLQ + + ++ ++ ++
Sbjct: 1820 EAKIAQLEEQVEQEAR----EKQAATKSLKQKDKKLKEILLQVEDERKMAEQYKEQAEK 1874
>gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Homo
sapiens]
Length = 1979
Score = 33.9 bits (76), Expect = 0.25
Identities = 27/119 (22%), Positives = 58/119 (48%), Gaps = 5/119 (4%)
Query: 84 RKGTTSYNEVADELVSEFTNSNNHLAADSQAYDQ-KNIRRRVYDALNVLMAMNIISKEKK 142
RK T ++++EL +E + + + +A Q Q K +R ++++ + + +
Sbjct: 1767 RKATQQAEQLSNELATERSTAQKNESARQQLERQNKELRSKLHEMEGAVKSKFKSTIAAL 1826
Query: 143 EIKWIGLPTNSAQECQNLEIEKQRRIERIKQKRAQLQELLLQQIAFKNLVQRNRQNEQQ 201
E K L QE + EKQ + +KQK +L+E+LLQ + + ++ ++ ++
Sbjct: 1827 EAKIAQLEEQVEQEAR----EKQAATKSLKQKDKKLKEILLQVEDERKMAEQYKEQAEK 1881
>gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Homo
sapiens]
Length = 1945
Score = 33.9 bits (76), Expect = 0.25
Identities = 27/119 (22%), Positives = 58/119 (48%), Gaps = 5/119 (4%)
Query: 84 RKGTTSYNEVADELVSEFTNSNNHLAADSQAYDQ-KNIRRRVYDALNVLMAMNIISKEKK 142
RK T ++++EL +E + + + +A Q Q K +R ++++ + + +
Sbjct: 1767 RKATQQAEQLSNELATERSTAQKNESARQQLERQNKELRSKLHEMEGAVKSKFKSTIAAL 1826
Query: 143 EIKWIGLPTNSAQECQNLEIEKQRRIERIKQKRAQLQELLLQQIAFKNLVQRNRQNEQQ 201
E K L QE + EKQ + +KQK +L+E+LLQ + + ++ ++ ++
Sbjct: 1827 EAKIAQLEEQVEQEAR----EKQAATKSLKQKDKKLKEILLQVEDERKMAEQYKEQAEK 1881
>gi|13124875 smooth muscle myosin heavy chain 11 isoform SM2A [Homo
sapiens]
Length = 1938
Score = 33.9 bits (76), Expect = 0.25
Identities = 27/119 (22%), Positives = 58/119 (48%), Gaps = 5/119 (4%)
Query: 84 RKGTTSYNEVADELVSEFTNSNNHLAADSQAYDQ-KNIRRRVYDALNVLMAMNIISKEKK 142
RK T ++++EL +E + + + +A Q Q K +R ++++ + + +
Sbjct: 1760 RKATQQAEQLSNELATERSTAQKNESARQQLERQNKELRSKLHEMEGAVKSKFKSTIAAL 1819
Query: 143 EIKWIGLPTNSAQECQNLEIEKQRRIERIKQKRAQLQELLLQQIAFKNLVQRNRQNEQQ 201
E K L QE + EKQ + +KQK +L+E+LLQ + + ++ ++ ++
Sbjct: 1820 EAKIAQLEEQVEQEAR----EKQAATKSLKQKDKKLKEILLQVEDERKMAEQYKEQAEK 1874
>gi|30581135 structural maintenance of chromosomes 1A [Homo sapiens]
Length = 1233
Score = 33.5 bits (75), Expect = 0.33
Identities = 32/124 (25%), Positives = 55/124 (44%), Gaps = 14/124 (11%)
Query: 91 NEVADELVSEFTNS----NNHLAADSQAYDQKNIRRRVYDALNVLMAMNI-ISKEKKEIK 145
N+V DE+ EF N + + Q I ++ + N + I + EK ++K
Sbjct: 770 NQVEDEVFEEFCREIGVRNIREFEEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLK 829
Query: 146 --------WIGLPTNSAQECQNLEIEKQRRIERIKQKRAQLQELLLQQIAFKNLV-QRNR 196
W E + L+ E+QR ++ I + AQLQ+L Q +A K+ V +N
Sbjct: 830 EDQDKVHMWEQTVKKDENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNH 889
Query: 197 QNEQ 200
+ E+
Sbjct: 890 EMEE 893
>gi|22758136 MAP7 domain containing 2 [Homo sapiens]
Length = 732
Score = 33.1 bits (74), Expect = 0.43
Identities = 26/122 (21%), Positives = 58/122 (47%), Gaps = 5/122 (4%)
Query: 83 QRKGTTSYNEVADELVSEFTNSNNHLAADSQAYDQKNIRRRVYDALNVLMAMNIISKEKK 142
Q G + +V + + + AA +A + + + + A I++++++
Sbjct: 350 QAAGPQGEEALEKHVVDKHASEKHAAAAGGKAENSAALGKPTAGTTDAGEAAKILAEKRR 409
Query: 143 EIKWIGLPTNSAQECQNLEIEKQRRIERIKQKR-AQLQELLLQQIAFKNLVQRNRQNEQQ 201
+ + +E + +E E+Q R+ER + KR A+ + L L++ A K +R RQ E++
Sbjct: 410 QARL----QKEQEEQERVEKEEQDRLEREELKRKAEEERLRLEEEARKQEEERKRQEEEK 465
Query: 202 NQ 203
+
Sbjct: 466 KK 467
>gi|38505226 E2F family member 8 [Homo sapiens]
Length = 867
Score = 32.7 bits (73), Expect = 0.57
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 105 NNHLAADSQAYDQKNIRRRVYDALNVLMAMNIISK-EKKEIKWIG 148
NN + D A + RRR+YD +NVL +++++S+ K W G
Sbjct: 138 NNDICLDEVAEELNVERRRIYDIVNVLESLHMVSRLAKNRYTWHG 182
>gi|171184451 centrosome-associated protein 350 [Homo sapiens]
Length = 3117
Score = 32.7 bits (73), Expect = 0.57
Identities = 23/94 (24%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Query: 137 ISKEKKEIKWIGLPTNSAQECQNLEIEKQRRIERIKQKRAQLQELLLQQIAFK---NLVQ 193
+ +EK EIK + +A++ + L +++Q IE+I+Q +LQE L K +
Sbjct: 1750 LQQEKAEIKRLQEANKAARKERQLILKQQEEIEKIRQTTIKLQEKLKSAGESKLDSHSDD 1809
Query: 194 RNRQNEQQNQGPPALNSTIQLPFIIINTSRKTVI 227
+ N+ + GP L + P I ++ +++
Sbjct: 1810 DTKDNKATSPGPTDLETRSPSPISISSSETSSIM 1843
>gi|81295816 nasopharyngeal epithelium specific protein 1 [Homo
sapiens]
Length = 551
Score = 32.7 bits (73), Expect = 0.57
Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 15/124 (12%)
Query: 83 QRKGTTSYNEVADELVSEFTNSNNHLAADSQAYDQKNIRRRVYDALNVLMAMNIISKEKK 142
Q+ + ++AD++V EFT A+ +A +Q+ IRR + L AM +EK
Sbjct: 325 QKAELLAQEKLADQMVMEFTKKKMAREAEFEA-EQERIRREKEKEIARLRAM----QEKA 379
Query: 143 EIKWIGLPTNSAQECQNLEIEKQRRIERIKQKR-----AQLQELLLQQIAFKN-----LV 192
+ A+ Q + + RR E+ ++ A+L++ L+Q+AFK V
Sbjct: 380 QDYQAEQDALRAKRNQEVADREWRRKEKENARKKMETEAELRKSRLEQVAFKEHALAVQV 439
Query: 193 QRNR 196
QR+R
Sbjct: 440 QRDR 443
>gi|70166430 GRINL1A combined protein isoform 2 [Homo sapiens]
Length = 445
Score = 32.3 bits (72), Expect = 0.74
Identities = 26/128 (20%), Positives = 62/128 (48%), Gaps = 17/128 (13%)
Query: 80 EKVQRKGTTSYNEVAD---ELVSEFTNSN-------NHLAADSQAYDQKNIRRRVYDALN 129
EKV+++ Y+E+ +L E + S+ NH+ S A D+ ++A+N
Sbjct: 112 EKVRKRMYGDYDEMRQKIRQLTQELSVSHAQQEYLENHIQTQSSALDR-------FNAMN 164
Query: 130 VLMAMNIISKEKKEIKWIGLPTNSAQECQNLEIEKQRRIERIKQKRAQLQELLLQQIAFK 189
+A + I +K + +N + +NL+ + ++++++K+ QL+ ++ K
Sbjct: 165 SALASDSIGLQKTLVDVTLENSNIKDQIRNLQQTYEASMDKLREKQRQLEVAQVENQLLK 224
Query: 190 NLVQRNRQ 197
V+ +++
Sbjct: 225 MKVESSQE 232
>gi|70166414 GRINL1A combined protein isoform 1 [Homo sapiens]
Length = 550
Score = 32.3 bits (72), Expect = 0.74
Identities = 26/128 (20%), Positives = 62/128 (48%), Gaps = 17/128 (13%)
Query: 80 EKVQRKGTTSYNEVAD---ELVSEFTNSN-------NHLAADSQAYDQKNIRRRVYDALN 129
EKV+++ Y+E+ +L E + S+ NH+ S A D+ ++A+N
Sbjct: 112 EKVRKRMYGDYDEMRQKIRQLTQELSVSHAQQEYLENHIQTQSSALDR-------FNAMN 164
Query: 130 VLMAMNIISKEKKEIKWIGLPTNSAQECQNLEIEKQRRIERIKQKRAQLQELLLQQIAFK 189
+A + I +K + +N + +NL+ + ++++++K+ QL+ ++ K
Sbjct: 165 SALASDSIGLQKTLVDVTLENSNIKDQIRNLQQTYEASMDKLREKQRQLEVAQVENQLLK 224
Query: 190 NLVQRNRQ 197
V+ +++
Sbjct: 225 MKVESSQE 232
>gi|111494235 GRINL1A combined protein isoform 8 [Homo sapiens]
Length = 438
Score = 32.3 bits (72), Expect = 0.74
Identities = 26/128 (20%), Positives = 62/128 (48%), Gaps = 17/128 (13%)
Query: 80 EKVQRKGTTSYNEVAD---ELVSEFTNSN-------NHLAADSQAYDQKNIRRRVYDALN 129
EKV+++ Y+E+ +L E + S+ NH+ S A D+ ++A+N
Sbjct: 112 EKVRKRMYGDYDEMRQKIRQLTQELSVSHAQQEYLENHIQTQSSALDR-------FNAMN 164
Query: 130 VLMAMNIISKEKKEIKWIGLPTNSAQECQNLEIEKQRRIERIKQKRAQLQELLLQQIAFK 189
+A + I +K + +N + +NL+ + ++++++K+ QL+ ++ K
Sbjct: 165 SALASDSIGLQKTLVDVTLENSNIKDQIRNLQQTYEASMDKLREKQRQLEVAQVENQLLK 224
Query: 190 NLVQRNRQ 197
V+ +++
Sbjct: 225 MKVESSQE 232
>gi|70166580 GRINL1A upstream protein isoform 7 [Homo sapiens]
Length = 466
Score = 32.3 bits (72), Expect = 0.74
Identities = 26/128 (20%), Positives = 62/128 (48%), Gaps = 17/128 (13%)
Query: 80 EKVQRKGTTSYNEVAD---ELVSEFTNSN-------NHLAADSQAYDQKNIRRRVYDALN 129
EKV+++ Y+E+ +L E + S+ NH+ S A D+ ++A+N
Sbjct: 112 EKVRKRMYGDYDEMRQKIRQLTQELSVSHAQQEYLENHIQTQSSALDR-------FNAMN 164
Query: 130 VLMAMNIISKEKKEIKWIGLPTNSAQECQNLEIEKQRRIERIKQKRAQLQELLLQQIAFK 189
+A + I +K + +N + +NL+ + ++++++K+ QL+ ++ K
Sbjct: 165 SALASDSIGLQKTLVDVTLENSNIKDQIRNLQQTYEASMDKLREKQRQLEVAQVENQLLK 224
Query: 190 NLVQRNRQ 197
V+ +++
Sbjct: 225 MKVESSQE 232
>gi|4758226 E2F transcription factor 2 [Homo sapiens]
Length = 437
Score = 32.3 bits (72), Expect = 0.74
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 11/74 (14%)
Query: 121 RRRVYDALNVLMAMNIISKE-KKEIKWIGLPTNSAQECQNLEIEKQRRIERIKQKRAQLQ 179
+RR+YD NVL + +I K+ K I+W+G E R + +Q +L+
Sbjct: 166 KRRIYDITNVLEGIQLIRKKAKNNIQWVGRGM----------FEDPTRPGKQQQLGQELK 215
Query: 180 ELLLQQIAFKNLVQ 193
EL+ + A L+Q
Sbjct: 216 ELMNTEQALDQLIQ 229
>gi|109637795 E2F transcription factor 6 [Homo sapiens]
Length = 281
Score = 32.3 bits (72), Expect = 0.74
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 11/72 (15%)
Query: 121 RRRVYDALNVLMAMNIISKE-KKEIKWIGLPTNS----------AQECQNLEIEKQRRIE 169
+RRVYD NVL ++++ K+ K I+WIG ++ +E +L + E
Sbjct: 100 KRRVYDITNVLDGIDLVEKKSKNHIRWIGSDLSNFGAVPQQKKLQEELSDLSAMEDALDE 159
Query: 170 RIKQKRAQLQEL 181
IK QL EL
Sbjct: 160 LIKDCAQQLFEL 171
>gi|8922950 meiosis-specific nuclear structural 1 [Homo sapiens]
Length = 495
Score = 32.3 bits (72), Expect = 0.74
Identities = 20/119 (16%), Positives = 55/119 (46%)
Query: 84 RKGTTSYNEVADELVSEFTNSNNHLAADSQAYDQKNIRRRVYDALNVLMAMNIISKEKKE 143
RK E + + EF N D A Q+N +R+ + + + +++++
Sbjct: 256 RKKKREEMEEENRKIIEFANMQQQREEDRMAKVQENEEKRLQLQNALTQKLEEMLRQRED 315
Query: 144 IKWIGLPTNSAQECQNLEIEKQRRIERIKQKRAQLQELLLQQIAFKNLVQRNRQNEQQN 202
++ + ++ + + + + E+ +K+ ++++ +Q+A K LV + + E++N
Sbjct: 316 LEQVRQELYQEEQAEIYKSKLKEEAEKKLRKQKEMKQDFEEQMALKELVLQAAKEEEEN 374
>gi|18093112 ABT1-associated protein [Homo sapiens]
Length = 851
Score = 32.3 bits (72), Expect = 0.74
Identities = 46/224 (20%), Positives = 99/224 (44%), Gaps = 32/224 (14%)
Query: 169 ERIKQKRAQLQELLLQQIAFKNLVQRNRQNEQQN----QGPPALNSTIQLPFIIINTSRK 224
++IK+K+ Q ++ +I KNLV++ ++ ++ N + L+++I + + TS K
Sbjct: 92 KKIKKKKTQTKK----EIDSKNLVEKKKETKKANHKGSENKTDLDNSIGIKKM--KTSCK 145
Query: 225 TVIDCSISSDKFEYLFNFDNTFEIHDDIEVLKRMGMSFGLESGKCSLEDLKLAKSLVPKA 284
ID +IS K F N E + ++ + SLE+ + +
Sbjct: 146 FKIDSNISPKKDSKEFTQKNKKEKKNIVQ-----------HTTDSSLEEKQ-------RT 187
Query: 285 LEGYITDISTGPSWLNQGLLLNSTQSVSNLDLTTGATLPQSSVNQGLCLDAEVALATGQF 344
L+ ++I P + QSV L +T + ++S + +C D + +
Sbjct: 188 LDSGTSEIVKSPR-IECSKTRREMQSVVQLIMTRDSDGYENSTDGEMC-DKDALEEDSES 245
Query: 345 LAP--NSHQSSSAASHCSESRGETPCSFNDEDEEDDEEDSSSPE 386
++ + +S + + + G+ S +DE+E++DEE+ +
Sbjct: 246 VSEIGSDEESENEITSVGRASGDDDGSEDDEEEDEDEEEDEDED 289
Score = 29.6 bits (65), Expect = 4.8
Identities = 22/96 (22%), Positives = 48/96 (50%), Gaps = 4/96 (4%)
Query: 54 DFSESKRSKKGDKNGKGLRHFS-MKVCEKVQRKGTTSYNEVADELVS--EFTNSNNHLAA 110
+ E R K DK + + H K+ V ++G + ++L + ++S+++L+
Sbjct: 24 EMPEKDRKVKIDKRFRAMFHDKKFKLNYAVDKRGRPISHSTTEDLKRFYDLSDSDSNLSG 83
Query: 111 -DSQAYDQKNIRRRVYDALNVLMAMNIISKEKKEIK 145
DS+A QK I+++ + + N++ K+K+ K
Sbjct: 84 EDSKALSQKKIKKKKTQTKKEIDSKNLVEKKKETKK 119
>gi|164419758 bromodomain containing 2 [Homo sapiens]
Length = 801
Score = 32.0 bits (71), Expect = 0.97
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 320 ATLPQSSVNQGLCLDAEVALATGQFLAPNSHQSSSAASHCSESRGETPCSFNDEDEEDDE 379
A +P + G L A+ G LA +S +SSS S SES E ++EDEE++E
Sbjct: 451 AKMPDEPLEPGP-LPVSTAMPPG--LAKSSSESSSEESS-SESSSEEEEEEDEEDEEEEE 506
Query: 380 EDSSSPE 386
+SS E
Sbjct: 507 SESSDSE 513
>gi|4826806 bromodomain containing 2 [Homo sapiens]
Length = 801
Score = 32.0 bits (71), Expect = 0.97
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 320 ATLPQSSVNQGLCLDAEVALATGQFLAPNSHQSSSAASHCSESRGETPCSFNDEDEEDDE 379
A +P + G L A+ G LA +S +SSS S SES E ++EDEE++E
Sbjct: 451 AKMPDEPLEPGP-LPVSTAMPPG--LAKSSSESSSEESS-SESSSEEEEEEDEEDEEEEE 506
Query: 380 EDSSSPE 386
+SS E
Sbjct: 507 SESSDSE 513
>gi|120431743 huntingtin-associated protein 1 isoform 3 [Homo
sapiens]
Length = 602
Score = 32.0 bits (71), Expect = 0.97
Identities = 30/121 (24%), Positives = 53/121 (43%), Gaps = 10/121 (8%)
Query: 268 KCSLEDLKLAKSLVPKALEGYITDISTGPSW--LNQGLLLNSTQSVSNLDLTTGATLPQS 325
K + ED+K+ L+ + ++ + P W + G++L + DL T A + QS
Sbjct: 168 KITQEDVKVMLYLLEEVCTAFLIQLLP-PVWESVTYGMVLQRER-----DLNTAARIGQS 221
Query: 326 SVNQGLCLDAEVALATGQFLAPNSHQSSSAASHCSESRGETPCSFNDEDEEDDEEDSSSP 385
V Q L E + + L ++ + H R E ++D DEED++E+
Sbjct: 222 LVKQNSVLMEENSKL--EALLGSAKEEILYLRHQVNLRDELLQLYSDSDEEDEDEEEEEE 279
Query: 386 E 386
E
Sbjct: 280 E 280
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.128 0.357
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,174,476
Number of Sequences: 37866
Number of extensions: 611131
Number of successful extensions: 4016
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 62
Number of HSP's that attempted gapping in prelim test: 3886
Number of HSP's gapped (non-prelim): 162
length of query: 386
length of database: 18,247,518
effective HSP length: 104
effective length of query: 282
effective length of database: 14,309,454
effective search space: 4035266028
effective search space used: 4035266028
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.