CACNA2D1 32483

Name: CACNA2D1	Sequence: fasta or formatted (1091aa)		NCBI GI: 54112390
Description: calcium channel, voltage-dependent, alpha 2/delta subunit 1		Referenced in: Calcium and TRP Cation Channels Common Drug Targets
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.1 67 3 C cysteine 1.8 20 1 D aspartate 7.1 78 3 E glutamate 5.9 64 2 F phenylalanine 4.5 49 2 G glycine 5.9 64 2 H histidine 1.0 11 1 I isoleucine 5.9 64 2 K lysine 6.3 69 2 L leucine 9.2 100 3 M methionine 1.6 18 1 N asparagine 6.9 75 2 P proline 4.5 49 1 Q glutamine 4.1 45 2 R arginine 4.1 45 3 S serine 6.7 73 2 T threonine 5.4 59 1 V valine 7.0 76 2 W tryptophan 1.6 17 2 Y tyrosine 4.4 48 3			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 calcium channel, voltage-dependent, alpha 2/delta su... CACNA2D2 0.523 calcium channel, voltage-dependent, alpha 2/delta su... CACNA2D2 0.520 calcium channel, voltage-dependent, alpha 2/delta su... CACNA2D3 0.171 calcium channel, voltage-dependent, alpha 2/delta 3 ... CACNA2D4 0.168 voltage-gated calcium channel alpha(2)delta-4 subun... CACHD1 0.033 cache domain containing 1 ITIH3 0.016 inter-alpha (globulin) inhibitor H3 preproprotein [... ITIH2 0.010 inter-alpha globulin inhibitor H2 polypeptide ITIH4 0.010 inter-alpha (globulin) inhibitor H4 ITIH1 0.010 inter-alpha (globulin) inhibitor H1 ITIH5L 0.008 inter-alpha (globulin) inhibitor H5-like MATN1 0.007 matrilin 1, cartilage matrix protein COL12A1 0.007 collagen, type XII, alpha 1 short isoform precursor ... COL12A1 0.007 collagen, type XII, alpha 1 long isoform precursor [... SVEP1 0.006 polydom MATN3 0.005 matrilin 3 precursor COL14A1 0.005 collagen, type XIV, alpha 1 C11orf57 0.004 hypothetical protein LOC55216 isoform b C11orf57 0.004 hypothetical protein LOC55216 isoform a C11orf57 0.004 hypothetical protein LOC55216 isoform a COL20A1 0.003 collagen, type XX, alpha 1 TNIP2 0.003 A20-binding inhibitor of NF-kappaB activation 2 iso... TNIP2 0.003 A20-binding inhibitor of NF-kappaB activation 2 iso... SF4 0.003 splicing factor 4 MBOAT1 0.003 membrane bound O-acyltransferase domain containing ... NDUFB11 0.003 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 1... NDUFB11 0.003 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, ... MATN2 0.003 matrilin 2 isoform b precursor MATN2 0.003 matrilin 2 isoform a precursor CC2D2A 0.003 coiled-coil and C2 domain containing 2A isoform a [... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.