Guide to the Human Genome
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Name: TNIP2 Sequence: fasta or formatted (429aa) NCBI GI: 239787092
Description:

A20-binding inhibitor of NF-kappaB activation 2 isoform 1

Not currently referenced in the text

Other entries for this name:
alt prot {322aa} A20-binding inhibitor of NF-kappaB activation 2 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.1         52           4
 C cysteine            2.3         10           2
 D aspartate           4.9         21           2
 E glutamate          11.9         51           2
 F phenylalanine       0.7          3           1
 G glycine             5.6         24           2
 H histidine           3.7         16           1
 I isoleucine          2.1          9           1
 K lysine              3.3         14           1
 L leucine            11.4         49           2
 M methionine          2.1          9           1
 N asparagine          1.6          7           1
 P proline             3.5         15           2
 Q glutamine           9.3         40           2
 R arginine           11.4         49           2
 S serine              5.1         22           1
 T threonine           2.8         12           1
 V valine              4.0         17           2
 W tryptophan          0.9          4           1
 Y tyrosine            1.2          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   A20-binding inhibitor of NF-kappaB activation 2 iso... 
TNIP2                 0.755   A20-binding inhibitor of NF-kappaB activation 2 iso...
MYH14                 0.052   myosin, heavy chain 14 isoform 1 
MYH14                 0.052   myosin, heavy chain 14 isoform 2 
MYH14                 0.052   myosin, heavy chain 14 isoform 3 
FYCO1                 0.047   FYVE and coiled-coil domain containing 1 
MYH9                  0.045   myosin, heavy polypeptide 9, non-muscle 
IKBKG                 0.045   inhibitor of kappa light polypeptide gene enhancer ...
IKBKG                 0.045   inhibitor of kappa light polypeptide gene enhancer in...
IKBKG                 0.045   inhibitor of kappa light polypeptide gene enhancer ...
NUMA1                 0.045   nuclear mitotic apparatus protein 1 
ANKRD24               0.045   ankyrin repeat domain 24 
MYH10                 0.043   myosin, heavy polypeptide 10, non-muscle 
CEP110                0.043   centrosomal protein 110kDa 
ANKRD35               0.043   ankyrin repeat domain 35 
PLEC1                 0.042   plectin 1 isoform 11 
PLEC1                 0.042   plectin 1 isoform 10 
PLEC1                 0.042   plectin 1 isoform 8 
PLEC1                 0.042   plectin 1 isoform 7 
PLEC1                 0.042   plectin 1 isoform 6 
PLEC1                 0.042   plectin 1 isoform 3 
PLEC1                 0.042   plectin 1 isoform 2 
PLEC1                 0.042   plectin 1 isoform 1 
TCHH                  0.042   trichohyalin 
ERC1                  0.042   RAB6-interacting protein 2 isoform epsilon 
MYH11                 0.042   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.042   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.042   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.042   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
CGNL1                 0.042   cingulin-like 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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