Guide to the Human Genome
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Name: TNIP2 Sequence: fasta or formatted (322aa) NCBI GI: 239787094
Description:

A20-binding inhibitor of NF-kappaB activation 2 isoform 2

Not currently referenced in the text

Other entries for this name:
alt prot {429aa} A20-binding inhibitor of NF-kappaB activation 2 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.9         32           2
 C cysteine            2.8          9           2
 D aspartate           5.0         16           2
 E glutamate          11.2         36           2
 F phenylalanine       0.6          2           1
 G glycine             5.3         17           2
 H histidine           4.7         15           1
 I isoleucine          2.2          7           1
 K lysine              4.0         13           1
 L leucine            10.6         34           2
 M methionine          2.2          7           1
 N asparagine          2.2          7           1
 P proline             3.7         12           2
 Q glutamine           9.9         32           2
 R arginine            9.9         32           2
 S serine              5.9         19           1
 T threonine           3.1         10           1
 V valine              4.7         15           2
 W tryptophan          0.9          3           1
 Y tyrosine            1.2          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   A20-binding inhibitor of NF-kappaB activation 2 iso... 
TNIP2                 1.000   A20-binding inhibitor of NF-kappaB activation 2 iso...
MYH9                  0.048   myosin, heavy polypeptide 9, non-muscle 
TNIP1                 0.048   TNFAIP3 interacting protein 1 
IKBKG                 0.048   inhibitor of kappa light polypeptide gene enhancer ...
IKBKG                 0.048   inhibitor of kappa light polypeptide gene enhancer in...
IKBKG                 0.048   inhibitor of kappa light polypeptide gene enhancer ...
ANKRD35               0.043   ankyrin repeat domain 35 
PLEC1                 0.042   plectin 1 isoform 11 
PLEC1                 0.042   plectin 1 isoform 10 
PLEC1                 0.042   plectin 1 isoform 8 
PLEC1                 0.042   plectin 1 isoform 7 
PLEC1                 0.042   plectin 1 isoform 6 
PLEC1                 0.042   plectin 1 isoform 3 
PLEC1                 0.042   plectin 1 isoform 2 
PLEC1                 0.042   plectin 1 isoform 1 
GOLGA2                0.038   Golgi autoantigen, golgin subfamily a, 2 
EPS15                 0.037   epidermal growth factor receptor pathway substrate 15...
TNIP3                 0.037   TNFAIP3 interacting protein 3 
TNIP3                 0.037   TNFAIP3 interacting protein 3 
CROCC                 0.037   ciliary rootlet coiled-coil 
MYH11                 0.037   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.037   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.037   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.037   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
NUMA1                 0.037   nuclear mitotic apparatus protein 1 
CDC42BPA              0.037   CDC42-binding protein kinase alpha isoform A 
EPS15                 0.035   epidermal growth factor receptor pathway substrate ...
CGN                   0.035   cingulin 
GCOM1                 0.034   GRINL1A combined protein isoform 8 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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