C11orf57 3060

Name: C11orf57	Sequence: fasta or formatted (292aa)		NCBI GI: 131888281
Description: hypothetical protein LOC55216 isoform b		Not currently referenced in the text
Other entries for this name: alt prot {293aa} hypothetical protein LOC55216 isoform a alt prot {293aa} hypothetical protein LOC55216 isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.8 14 1 C cysteine 0.0 0 0 D aspartate 6.8 20 2 E glutamate 10.6 31 2 F phenylalanine 2.1 6 1 G glycine 3.4 10 1 H histidine 3.4 10 1 I isoleucine 2.7 8 1 K lysine 17.1 50 3 L leucine 3.8 11 2 M methionine 2.1 6 1 N asparagine 3.8 11 2 P proline 2.7 8 1 Q glutamine 3.4 10 2 R arginine 7.5 22 1 S serine 13.7 40 4 T threonine 6.2 18 1 V valine 1.7 5 1 W tryptophan 1.7 5 1 Y tyrosine 2.4 7 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hypothetical protein LOC55216 isoform b C11orf57 0.993 hypothetical protein LOC55216 isoform a C11orf57 0.993 hypothetical protein LOC55216 isoform a NKAP 0.087 NFKB activating protein CYLC1 0.074 cylicin, basic protein of sperm head cytoskeleton 1... NKAPL 0.073 NFKB activating protein-like FAM133A 0.067 hypothetical protein LOC286499 FAM133B 0.060 hypothetical protein LOC257415 isoform 2 FAM133B 0.060 hypothetical protein LOC257415 isoform 1 CYLC2 0.059 cylicin 2 LOC100133599 0.055 PREDICTED: hypothetical protein LOC100133599 0.053 PREDICTED: hypothetical protein PPIG 0.053 peptidylprolyl isomerase G CIR1 0.051 CBF1 interacting corepressor LOC100294088 0.051 PREDICTED: hypothetical protein, partial PRPF40A 0.051 formin binding protein 3 RSRC2 0.051 arginine/serine-rich coiled-coil 2 isoform a ARL6IP4 0.050 SRp25 nuclear protein isoform 1 SFRS12 0.050 splicing factor, arginine/serine-rich 12 isoform a ... TRDN 0.050 triadin SFRS12 0.050 splicing factor, arginine/serine-rich 12 isoform b [... LOC645202 0.048 PREDICTED: hypothetical protein LOC645202 ATRX 0.048 transcriptional regulator ATRX isoform 2 ATRX 0.048 transcriptional regulator ATRX isoform 1 SON 0.048 SON DNA-binding protein isoform F SON 0.048 SON DNA-binding protein isoform B RSF1 0.046 remodeling and spacing factor 1 TCHH 0.046 trichohyalin PRPF38B 0.046 PRP38 pre-mRNA processing factor 38 (yeast) domain ... ARL6IP4 0.046 SRp25 nuclear protein isoform 3 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.