Guide to the Human Genome
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Name: ITIH3 Sequence: fasta or formatted (890aa) NCBI GI: 133925809
Description:

inter-alpha (globulin) inhibitor H3 preproprotein

Referenced in:

Protease Inhibitors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.3         56           2
 C cysteine            0.6          5           1
 D aspartate           6.3         56           2
 E glutamate           7.1         63           2
 F phenylalanine       5.3         47           2
 G glycine             6.9         61           2
 H histidine           2.4         21           1
 I isoleucine          4.8         43           2
 K lysine              6.6         59           2
 L leucine             8.7         77           2
 M methionine          2.5         22           2
 N asparagine          5.4         48           2
 P proline             4.4         39           2
 Q glutamine           3.8         34           2
 R arginine            4.2         37           2
 S serine              5.8         52           2
 T threonine           6.6         59           2
 V valine              8.3         74           3
 W tryptophan          0.9          8           2
 Y tyrosine            3.3         29           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   inter-alpha (globulin) inhibitor H3 preproprotein [... 
ITIH1                 0.524   inter-alpha (globulin) inhibitor H1 
ITIH2                 0.373   inter-alpha globulin inhibitor H2 polypeptide 
ITIH4                 0.342   inter-alpha (globulin) inhibitor H4 
ITIH5                 0.263   inter-alpha trypsin inhibitor heavy chain precursor...
ITIH5                 0.218   inter-alpha trypsin inhibitor heavy chain precursor...
ITIH5L                0.205   inter-alpha (globulin) inhibitor H5-like 
ITIH5                 0.199   inter-alpha trypsin inhibitor heavy chain precursor ...
CACNA2D1              0.020   calcium channel, voltage-dependent, alpha 2/delta su...
CACNA2D2              0.018   calcium channel, voltage-dependent, alpha 2/delta su...
CACNA2D2              0.018   calcium channel, voltage-dependent, alpha 2/delta su...
CACNA2D4              0.017   voltage-gated calcium channel alpha(2)delta-4 subun...
VWA3B                 0.016   von Willebrand factor A domain containing 3B 
PARP4                 0.015   poly (ADP-ribose) polymerase family, member 4 [Homo...
VWA5A                 0.014   BCSC-1 isoform 1 
VWA5A                 0.014   BCSC-1 isoform 1 
CACNA2D3              0.013   calcium channel, voltage-dependent, alpha 2/delta 3 ...
VWA5B1                0.012   von Willebrand factor A domain containing 5B1 [Homo...
VWA5A                 0.012   BCSC-1 isoform 2 
VWA3A                 0.011   von Willebrand factor A domain containing 3A 
CACHD1                0.007   cache domain containing 1 
C12orf35              0.006   hypothetical protein LOC55196 
SVEP1                 0.005   polydom 
ITGAM                 0.005   integrin alpha M isoform 1 precursor 
ITGAM                 0.005   integrin alpha M isoform 2 precursor 
TNXB                  0.005   tenascin XB isoform 1 precursor 
CCDC14                0.005   coiled-coil domain containing 14 
PRKCD                 0.004   protein kinase C, delta 
PRKCD                 0.004   protein kinase C, delta 
HYDIN                 0.004   hydrocephalus inducing isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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